Contig 008934:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN014E16Sequence599008934 (2)dbj|BAJ13303.1|5e-52autophagy 8 [Ipomoea nil]
JMFN038J09Sequence554008934 (2)dbj|BAJ13303.1|2e-68autophagy 8 [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN014E16+ CACACTTGGTAGGGTAGTCCGCACCTATTCAGGAATATCTGCTATACATAGAGTGTTAA
                      ____________________________________________________________
consensus CACACTTGGTAGGGTAGTCCGCACCTATTCAGGAATATCTGCTATACATAGAGTGTTAA
 
. : . : . : . : . : . :
JMFN014E16+ CAGTAAAAGTAGCAGTGATGATTTTATTCACAATCTTATCGCAGTGGAAATGGTGGAATG
                      ____________________________________________________________
consensus CAGTAAAAGTAGCAGTGATGATTTTATTCACAATCTTATCGCAGTGGAAATGGTGGAATG
 
. : . : . : . : . : . :
JMFN038J09+ CCGAATGTGTTCTCT
JMFN014E16+ GCTTGAGAATGAATCTTGTAGCGGCTTTAGACCGGGATATGGTCCCCGAATGTGTTCTCT
                      ____________________________________________________________
consensus GCTTGAGAATGAATCTTGTAGCGGCTTTAGACCGGGATATGGTCCCCGAATGTGTTCTCT
 
. : . : . : . : . : . :
JMFN038J09+ CCGCTGTAGGTAACATAGAGAAAACCGTCTTCGTCCTTCTTCTCATCGTAAATTGCAGAC
JMFN014E16+ CCGCTGTAGGTAACATAGAGAAAACCGTATTCGTCCTTATTCTCATCGTAAATTGCAGAC
                      ____________________________________________________________
consensus CCGCTGTAGGTAACATAGAGAAAACCGTCTTCGTCCTTCTTCTCATCGTAAATTGCAGAC
 
. : . : . : . : . : . :
JMFN038J09+ ATGATTGCCCCCGTTGGTGGAAGCACATTGTCA-ACAAATATGAAAATTGCTTTCTCCGC
JMFN014E16+ ATGATTGCCCCCGTTGGTGGAAGCACAATGTCATGCAAATATGAAAATTGCTTTCTCCGC
                      ____________________________________________________________
consensus ATGATTGCCCCCGTTGGTGGAAGCACATTGTCATGCAAATATGAAAATTGCTTTCTCCGC
 
. : . : . : . : . : . :
JMFN038J09+ ACTCAATTTGATTCTTTTGCGAATAACATAAACAAACTGCCCTACTGTCAAGTCAGCTGG
JMFN014E16+ ACTCAATTTGATTCTTTTGCGAATAACATAAACAAACTGCCCTACTGTCAAGTCAGCTGG
                      ____________________________________________________________
consensus ACTCAATTTGATTCTTTTGCGAATAACATAAACAAACTGCCCTACTGTCAAGTCAGCTGG
 
. : . : . : . : . : . :
JMFN038J09+ GACGAGATACTTTTTCTTGTCAATGTTAGGAATATCACTTCTTTCTGCCTTCTCAACGAT
JMFN014E16+ GACGAGATACTTTTTCTTGTCAATGTTAGGAATATCACTTCTTTATGCCTTCTCAACGAT
                      ____________________________________________________________
consensus GACGAGATACTTTTTCTTGTCAATGTTAGGAATATCACTTCTTTCTGCCTTCTCAACGAT
 
. : . : . : . : . : . :
JMFN038J09+ CACCGGAATTCTATCTGGGTATTTTTCCCTAATCCTAGCCGCCTCAGCACGCCTCTTCAC
JMFN014E16+ CACCGGAATTCTATCTGGGTATTTTTCCCTAATCCTAGCCGCCTCAGCACGCCTGTTCAC
                      ____________________________________________________________
consensus CACCGGAATTCTATCTGGGTATTTTTCCCTAATCCTAGCCGCCTCAGCACGCCTGTTCAC
 
. : . : . : . : . : . :
JMFN038J09+ AAGATCATGCTCTTGCTTGAATGAA
JMFN014E16+ AAGATCATGGTCTTGCTTGAATGAACTCCTAGCCATCCCACCTTCTTGAAAATAATGAAC
                      ____________________________________________________________
consensus AAGATCATGGTCTTGCTTGAATGAACTCCTAGCCATCCCACCTTCTTGAAAATAATGAAC
 
. : . : . : . : . : . :
JMFN014E16+ GGTTGGGAAAGGGAAAAAGGAAAGATAAAGAACCGGGACGACGAGTAGATTAAGGTTGAT
                      ____________________________________________________________
consensus GGTTGGGAAAGGGAAAAAGGAAAGATAAAGAACCGGGACGACGAGTAGATTAAGGTTGAT