Contig 008895:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001D22Sequence545008895 (7)dbj|BAO57279.1|3e-95alpha-expansin [Ipomoea nil]732008895 (7)ref|XP_010452058.1|9e-48PREDICTED: expansin-A9-like [Camelina sativa]
JMFF024P08Sequence492008895 (7)dbj|BAO57279.1|8e-82alpha-expansin [Ipomoea nil]763008895 (7)gb|AEE69071.1|3e-63expansin-4 [Petunia hybrid cultivar]
JMFF050F09Sequence596008895 (7)dbj|BAO57279.1|9e-96alpha-expansin [Ipomoea nil]
JMSF001I05Sequence258008895 (7)ref|XP_009788740.1|9e-27PREDICTED: expansin-A3-like [Nicotiana sylvestris]715008895 (7)gb|AEE69071.1|2e-57expansin-4 [Petunia hybrid cultivar]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF001I05- A
rJMFF001D22- CAACTTGATTACACATAATAATGAAAATAA
rJMFF024P08- CAACTTGATTACACATAATAATGAAAATAA
                      ____________________________________________________________
consensus CAACTTGATTACACATAATAATGAAAATAA
 
. : . : . : . : . : . :
rJMSF001I05- TAATAGTAAACAGAGAACTGCGGGCTACAATACTTCCTACTATTTTGTTTTTACTGCAAC
rJMFF001D22- TAATAGTAAACAGAGAACTGCGGGCTACAATACTTCCTACTATTTTGTTTTTACTGCAAC
rJMFF024P08- TAATAGTAAACAGAGAACTGCGGGCTACAATACTTCCTACTATTTTGTTTTTACTGCAAC
                      ____________________________________________________________
consensus TAATAGTAAACAGAGAACTGCGGGCTACAATACTTCCTACTATTTTGTTTTTACTGCAAC
 
. : . : . : . : . : . :
rJMSF001I05- CGCTTCAGCCTCTACAACTTACAATCATTTCCCCTCACTTTCATTCATTACTTAACTTCC
rJMFF001D22- CGCTTCAGCCTCTACAACTTACAATCATTTCCCCTCACTTTCATTCATTACTTAACTTCC
rJMFF024P08- CGCTTCAGCCTCTACAACTTACAATCATTTCCCCTCACTTTCATTCATTACTTAACTTCC
                      ____________________________________________________________
consensus CGCTTCAGCCTCTACAACTTACAATCATTTCCCCTCACTTTCATTCATTACTTAACTTCC
 
. : . : . : . : . : . :
rJMSF001I05- AACATCTATACTTAACAAACATCACTTAAAATACCCCCACAAAATATTAGTACAATATTT
rJMFF001D22- AACATCTATACTTAACAAACATCACTTAAAATACCCCCACAAAATATTAGTACAATATTT
rJMFF024P08- AACATCTATACTTAACAAACATCACTTAAAATACCCCCACAAAATATTAGTACAATATTT
                      ____________________________________________________________
consensus AACATCTATACTTAACAAACATCACTTAAAATACCCCCACAAAATATTAGTACAATATTT
 
. : . : . : . : . : . :
rJMSF001I05- CTTAACTTTTAACTCCCACACAATTCAATTTTTCTCGAGAAAAAGAGAAAAATTGAAGGT
rJMFF001D22- CTTAACTTTTAACTCCCACACAATTCAATTTTTCTCGAGAAAAAGAGAAAAATTGAAGGT
rJMFF024P08- CTTAACTTTTAACTCCCACACAATTCAATTTTTCTCGAGAAAAAGAGAAAAATTGAAGGT
                      ____________________________________________________________
consensus CTTAACTTTTAACTCCCACACAATTCAATTTTTCTCGAGAAAAAGAGAAAAATTGAAGGT
 
. : . : . : . : . : . :
rJMSF001I05- GGGTAAATTACGGTAAAAAGAACTACATGTAAAAAGAAGAAAAGTATAAAGGGTAGATTT
rJMFF001D22- GGGTAAATTACGGTAAAAAGAACTACATGTAAAAAGAAGAAAAGTATAAAGGGTAGATTT
rJMFF024P08- GGGTAAATTACGGTAAAAAGAACTACATGTAAAAAGAAGAAAAGTATAAAGGGTAGATTT
                      ____________________________________________________________
consensus GGGTAAATTACGGTAAAAAGAACTACATGTAAAAAGAAGAAAAGTATAAAGGGTAGATTT
 
. : . : . : . : . : . :
rJMSF001I05- CTAATTCTTAGAAATTTTCCCGTGTCAGTTTCAAGGTTTATGGACTATATGTAGTAAATT
rJMFF001D22- CTAATTCTTAGAAATTTTCCCGTGTCAGTTTCAAGGTTTATGGACTATATGTAGTAAATT
rJMFF024P08- CTAATTCTTAGAAATTTTCCCGTGTCAGTTTCAAGGTTTATGGACTATATGTAGTAAATT
                      ____________________________________________________________
consensus CTAATTCTTAGAAATTTTCCCGTGTCAGTTTCAAGGTTTATGGACTATATGTAGTAAATT
 
. : . : . : . : . : . :
rJMSF001I05- AGATTCGGAAATTCTTGCCCACGTAAGTCTGGCCAAACTGCCAATTAGCGGGTGAGATGT
rJMFF001D22- AGATTCGGAAATTCTTGCCCACGTAAGTCTGGCCAAACTGCCAATTAGCGGGTGAGATGT
rJMFF024P08- AGATTCGGAAATTCTTGCCCACGTAAGTCTGGCCAAACTGCCAATTAGCGGGTGAGATGT
                      ____________________________________________________________
consensus AGATTCGGAAATTCTTGCCCACGTAAGTCTGGCCAAACTGCCAATTAGCGGGTGAGATGT
 
. : . : . : . : . : . :
rJMSF001I05- TCTTTGAGGTTACTTTGCGACCATCACTGGATCGAACTCTGAAAGATAAAGCTTGACCTG
rJMFF001D22- TCTTTGAGGTTACTTTGCGACCATCACTGGATCGAACTCTGAAAGATAAAGCTTGACCTG
rJMFF024P08- TCTTTGAGGTTACTTTGCGACCATCACTGGATCGAACTCTGAAAGATAAAGCTTGACCTG
                      ____________________________________________________________
consensus TCTTTGAGGTTACTTTGCGACCATCACTGGATCGAACTCTGAAAGATAAAGCTTGACCTG
 
. : . : . : . : . : . :
rJMSF001I05- AAAGCATTGCACTAGATTGCCAATTTTGCCCCCAATTGCGGCTCATGGTCAGCCATTGGG
rJMFF001D22- AAAGCATTGCACTAGATTGCCAATTTTGCCCCCAATTGCGGCTCATGGTCAGCCATTGGG
rJMFF024P08- AAAGCATTGCACTAGATTGCCAATTTTGCCCCCAATTGCGGCTCATGGTCAGCCATTGGG
                      ____________________________________________________________
consensus AAAGCATTGCACTAGATTGCCAATTTTGCCCCCAATTGCGGCTCATGGTCAGCCATTGGG
 
. : . : . : . : . : . :
rJMSF001I05- TGTTGGTGCCCTTGATCCACACATTTTGGACATCACCTGCACCTGCTACGTTGGTTACTA
rJMFF001D22- TGTTGGTGCCCTTGATCCACACATTTTGGACATCACCTGCACCTGCTACGTTGGTTACTA
rJMFF024P08- TGTTGGTGCCCTTGATCCACACATTTTGGACATCACCTGCACCTGCTACGTTGGTTACTA
                      ____________________________________________________________
consensus TGTTGGTGCCCTTGATCCACACATTTTGGACATCACCTGCACCTGCTACGTTGGTTACTA
 
. : . : . : . : . : . :
rJMSF001I05- TTACCAAGTTGAAGAATTGGTGACCATTGATCGTGAATCTGATTCCTCCTTGTTTTCTGC
rJMFF001D22- TTACCAAGTTGAAGAATTGGTGACCATTGATCGTGAATCTGATTCCTCCTTGTTTTCTGC
rJMFF024P08- TTACCAAGTTGAAGAATTGGTGACCATTGATCGTGAATCTGATTCCTCCTTGTTTTCTGC
JMFF001D22+ TTTCTGC
JMFF050F09+ TTTCTGC
                      ____________________________________________________________
consensus TTACCAAGTTGAAGAATTGGTGACCATTGATCGTGAATCTGATTCCTCCTTGTTTTCTGC
 
. : . : . : . : . : . :
rJMSF001I05- ATGGAACCCGGCGGAAGTTGACGGGGACGATACCGGCACGGTAGGCGGCGATTT
rJMFF001D22- ATGGAACCC
rJMFF024P08- ATGGAACCCGGCGGAAGTTGACGGGGACGATACCGGCACGGTAGGCGGCGATTTTGAGGA
JMFF001D22+ ATGGAACCCGGCGGAAGTTGACGGGGACGATACCGGCACGGTAGGCGGCGATTTTGAGGA
JMFF024P08+ CGGCGATTTTGAGGA
JMFF050F09+ ATGGAACCCGGCGGAAGTTGACGGGGACGATACCGGCACGGTAGGCGGCGATTTTGAGGA
                      ____________________________________________________________
consensus ATGGAACCCGGCGGAAGTTGACGGGGACGATACCGGCACGGTAGGCGGCGATTTTGAGGA
 
. : . : . : . : . : . :
rJMFF024P08- ACATAGGCAT
JMFF001D22+ ACATAGGCATGGCGAGATCGAAGTGGAGGCGGGGAGGGTTGCACCAGCCGCCATTGTCGT
JMFF024P08+ ACATAGGCATGGCGAGATCGAAGTGGAGGCGGGGAGGGTTGCACCAGCCGCCATTGTCGT
JMFF050F09+ ACATAGGCATGGCGAGATCGAAGTGGAGGCGGGGAGGGTTGCACCAGCCGCCATTGTCGT
                      ____________________________________________________________
consensus ACATAGGCATGGCGAGATCGAAGTGGAGGCGGGGAGGGTTGCACCAGCCGCCATTGTCGT
 
. : . : . : . : . : . :
JMFF001D22+ TGGGCAAGGCGAAGTTGGGCGGGCAGAAGTTGGTGGCGGTGACCACAATGGACGGGTTTC
JMFF024P08+ TGGGCAAGGCGAAGTTGGGCGGGCAGAAGTTGGTGGCGGTGACCACAATGGACGGGTTTC
JMFF050F09+ TGGGCAAGGCGAAGTTGGGCGGGCAGAAGTTGGTGGCGGTGACCACAATGGACGGGTTTC
                      ____________________________________________________________
consensus TGGGCAAGGCGAAGTTGGGCGGGCAGAAGTTGGTGGCGGTGACCACAATGGACGGGTTTC
 
. : . : . : . : . : . :
JMFF001D22+ CGGCGAGGCACGATCTGTCATTGTTGCATTTGATCTCGAAGCAGGCGCCGCAGCTCAGCC
JMFF024P08+ CGGCGAGGCACGATCTGTCATTGTTGCATTTGATCTCGAAGCAGGCGCCGCAGCTCAGCC
JMFF050F09+ CGGCGAGGCACGATCTGTCATTGTTGCATTTGATCTCGAAGCAGGCGCCGCAGCTCAGCC
                      ____________________________________________________________
consensus CGGCGAGGCACGATCTGTCATTGTTGCATTTGATCTCGAAGCAGGCGCCGCAGCTCAGCC
 
. : . : . : . : . : . :
JMFF001D22+ CGGTGTTGAACAGCGCCGTGCTCAGCGCCGCATTGTTAACCCCATACCCCTGCGTGTACA
JMFF024P08+ CGGTGTTGAACAGCGCCGTGCTCAGCGCCGCATTGTTAACCCCATACCCCTGCGTGTACA
JMSF001I05+ CCCATACCCCTGCGTGTACA
JMFF050F09+ CGGTGTTGAACAGCGCCGTGCTCAGCGCCGCATTGTTAACCCCATACCCCTGCGTGTACA
                      ____________________________________________________________
consensus CGGTGTTGAACAGCGCCGTGCTCAGCGCCGCATTGTTAACCCCATACCCCTGCGTGTACA
 
. : . : . : . : . : . :
JMFF001D22+ GATTCCCGTACCCACAAGCTCCCGCCATGGTCCCGGAGGCATCAGCGCCGCCGTAGAAGG
JMFF024P08+ GATTCCCGTACCCACAAGCTCCCGCCATGGTCCCGGAGGCATCAGCGCCGCCGTAGAAGG
JMSF001I05+ GATTCCCGTACCCACAAGCTCCCGCCATGGTCCCGGAGGCATCAGCGCCGCCGTAGAAGG
JMFF050F09+ GATTCCCGTACCCACAAGCTCCCGCCATGGTCCCGGAGGCATCAGCGCCGCCGTAGAAGG
                      ____________________________________________________________
consensus GATTCCCGTACCCACAAGCTCCCGCCATGGTCCCGGAGGCATCAGCGCCGCCGTAGAAGG
 
. : . : . : . : . : . :
JMFF001D22+ TGGCGTGGGCACCCTGCCAGGGGCCGCTGGTGTAAACGCCGGGTATCCGAGCTCGAACGG
JMFF024P08+ TGGCGTGGGCACCCTGCCAGGGGCCGCCGGTGTAAACGCCGGGTATCCGAGCTCGAACGG
JMSF001I05+ TGGCGTGGGCACCCTGCCAGGGGCCGCCGGTGTAAACGCCGGGTATCCGAGCTCGAACGG
JMFF050F09+ TGGCGTGGGCACCCTGCCAGGGGCCGCCGGTGTAAACGCCGGGTATCCGAGCTCGAACGG
                      ____________________________________________________________
consensus TGGCGTGGGCACCCTGCCAGGGGCCGCCGGTGTAAACGCCGGGTATCCGAGCTCGAACGG
 
. : . : . : . : . : . :
JMFF001D22+ CAGTGAGGAAACAGAAGAGAGCAATGCAGAACACCCTCAATGCCGCCATTTCCATAAACT
JMFF024P08+ CAGTGAGGAAACAGAAGAGAGCAATGCAGAACACCCTCAATGCCGCCATTTCCATAAACT
JMSF001I05+ CAGTGAGGAAACAGAAGAGAGCAATGCAGAACACCCTCAATGCCGCCATTTCCATAAACT
JMFF050F09+ CAGTGAGGAAACAGAAGAGAGCAATGCAGAACACCCTCAATGCCGCCATTTCCATAAACT
                      ____________________________________________________________
consensus CAGTGAGGAAACAGAAGAGAGCAATGCAGAACACCCTCAATGCCGCCATTTCCATAAACT
 
. : . : . : . : . : . :
JMFF001D22+ TGAACTTGAACAGAGAGATTTACAGTAGAGAGAGAGAGAGATTGGGAGTTTGGGGAC
JMFF024P08+ TGAACTTGAACAGAGAGATTTACAGTAGAGAGAGAGAGAGATTGGGAGTTTGGGGAC
JMSF001I05+ TGAACTTGAACAGAGAGATTTACAGTAGAGAGAGAGAGAGATTGGGAGTTTGGGGAC
JMFF050F09+ TGAACTTGAACAGAGAGATTTACAGTAGAGAGAGAGAGAGATTGGGAGTTTGGGGACCGG
                      ____________________________________________________________
consensus TGAACTTGAACAGAGAGATTTACAGTAGAGAGAGAGAGAGATTGGGAGTTTGGGGACCGG