Contig 008884:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032I22Sequence557008884 (2)gb|KJB22498.1|7e-63hypothetical protein B456_004G050500 [Gossypium raimondii]694003010 (12)emb|CDP18233.1|1e-97unnamed protein product [Coffea canephora]
JMFF048B16Sequence440008884 (2)gb|EPS68927.1|9e-30hypothetical protein M569_05838, partial [Genlisea aurea]314003010 (12)ref|XP_008454295.1|2e-07PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF032I22+ GTAGGCATCCACCAAGTAAACAAC
                      ____________________________________________________________
consensus GTAGGCATCCACCAAGTAAACAAC
 
. : . : . : . : . : . :
JMFF032I22+ AGCATCCACCTTAGCATAATAGTCCTTCCAAACGCGGCGGGCAATTTGATGCCCTCCCAA
                      ____________________________________________________________
consensus AGCATCCACCTTAGCATAATAGTCCTTCCAAACGCGGCGGGCAATTTGATGCCCTCCCAA
 
. : . : . : . : . : . :
JMFF032I22+ GTCAAAAGCCTTAAACTTGATTTTCCCAATACTCAGCTCCTCAGATGTTGGGTACTGTGT
JMFF048B16+ TCAGATGTTGGGTACTGTGT
                      ____________________________________________________________
consensus GTCAAAAGCCTTAAACTTGATTTTCCCAATACTCAGCTCCTCAGATGTTGGGTACTGTGT
 
. : . : . : . : . : . :
JMFF032I22+ AGGCTGATGTTGGACTAATCTCTCATCTTTCAACATGTGAAGCAAGGTCGTTTTGCCAGC
JMFF048B16+ AGGCTGATGTTGGACTAATCTCTCATCTTTCAACATGTGAAGCAAGGTCGTTTTGCCAGC
                      ____________________________________________________________
consensus AGGCTGATGTTGGACTAATCTCTCATCTTTCAACATGTGAAGCAAGGTCGTTTTGCCAGC
 
. : . : . : . : . : . :
JMFF032I22+ ATTATCGAGGCCCAAGAACAAGATTTTAGCCTCCTTCTGCCACAGGCCCAGCGATGCGAG
JMFF048B16+ ATTATCGAGGCCCAAGAACAAGATNTTAGCCTCCTTCTGCCACAGGCCCAGCGATGCGAG
                      ____________________________________________________________
consensus ATTATCGAGGCCCAAGAACAAGATTTTAGCCTCCTTCTGCCACAGGCCCAGCGATGCGAG
 
. : . : . : . : . : . :
JMFF032I22+ AATCCCGTAGAACCAATCGACCAAGAACATCCTTCCGTGTATACGTTGATATATGAGGTG
JMFF048B16+ AATCCCGTAGAACCAATCGACCAAGAACATCCTTCCGTGTATACGTTGATATATGAGGTG
                      ____________________________________________________________
consensus AATCCCGTAGAACCAATCGACCAAGAACATCCTTCCGTGTATACGTTGATATATGAGGTG
 
. : . : . : . : . : . :
JMFF032I22+ AATTAAATTAATACTACCAGATTGCAGACAACCCTCTGATCCGACGAATAAACCCTAGAA
JMFF048B16+ AATTAAATTAATACTACCAGATTGCAGACAACCCTCTGATCCGACGAATAAACCCTAGAA
                      ____________________________________________________________
consensus AATTAAATTAATACTACCAGATTGCAGACAACCCTCTGATCCGACGAATAAACCCTAGAA
 
. : . : . : . : . : . :
JMFF032I22+ CTTCAGAAACGGAGAAGAAAAAGGATAAAGAAGCGTAAAACAAATAGTGGAATCGATGGA
JMFF048B16+ CTTCAGAAACGGAGAAGAAAAAGGATAAAGAAGCGTAAAACAAATAGTGGAATCGATGGA
                      ____________________________________________________________
consensus CTTCAGAAACGGAGAAGAAAAAGGATAAAGAAGCGTAAAACAAATAGTGGAATCGATGGA
 
. : . : . : . : . : . :
JMFF032I22+ TTTACCTACGTTGATTTCGCAATCCCTTTCGATTGATTCAACAGAGAACTCCTCAAAACG
JMFF048B16+ TTTACCTACGTTGATTTCGCAATCCCTTTCGATTGATTCAACAGAGAACTCCTCAAAACG
                      ____________________________________________________________
consensus TTTACCTACGTTGATTTCGCAATCCCTTTCGATTGATTCAACAGAGAACTCCTCAAAACG
 
. : . : . : . : . : . :
JMFF032I22+ CTAACGCATTTTGGAGCAATGCGTAGGTGTGCGTTTGGTTCATCGCCGTTTAC
JMFF048B16+ CTAACGCATTTTGGAGCAATGCGTAGGTGTGCGTTTGGTTCATCGCCGTTTACCGGTTCT
                      ____________________________________________________________
consensus CTAACGCATTTTGGAGCAATGCGTAGGTGTGCGTTTGGTTCATCGCCGTTTACCGGTTCT