| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF047I07 | Sequence | 553 | 008881 (3) | sp|P48395.1|CHSA_IPONI | 2e-85 | RecName: Full=Chalcone synthase A; AltName: Full=Naringenin-chalcone synthase A | 422 | 002708 (3) | sp|P48398.1|CHSB_IPOPU | 9e-37 | RecName: Full=Chalcone synthase B; AltName: Full=Naringenin-chalcone synthase B |
| JMFF047I10 | Sequence | 449 | 008881 (3) | gb|AAB02620.1| | 9e-68 | chalcone synthase A [Ipomoea purpurea] gb|AAB62591.1| chalcone synthase-A [Ipomo | 446 | 002708 (3) | gb|AAB62589.1| | 3e-48 | chalcone synthase-A [Ipomoea purpurea] |
| JMSF009M09 | Sequence | 270 | 008881 (3) | sp|P48395.1|CHSA_IPONI | 6e-41 | RecName: Full=Chalcone synthase A; AltName: Full=Naringenin-chalcone synthase A | 704 | 002708 (3) | gb|AAB62589.1| | 5e-146 | chalcone synthase-A [Ipomoea purpurea] |
This contig is upended
. : . : . : . : . : . :
JMFF047I07+ GGTACATCATTAAGCGGTTCACGGACGAGCTAAGGCCCAGTAGCTNTGC
____________________________________________________________
consensus GGTACATCATTAAGCGGTTCACGGACGAGCTAAGGCCCAGTAGCTNTGC
. : . : . : . : . : . :
JMFF047I07+ GAGTGGAAATCTGCACCGGGCATGTCAACGCCGCTGGAGGTACAGAACACTAAATGGGTA
____________________________________________________________
consensus GAGTGGAAATCTGCACCGGGCATGTCAACGCCGCTGGAGGTACAGAACACTAAATGGGTA
. : . : . : . : . : . :
JMFF047I07+ TTTCAGAAATGGGGCGACCCCATTCCTTTATAGCCTTCATGGCAGCTTCTTTGCCCAGCT
JMFF047I10+ TCTTTGCCCAGCT
____________________________________________________________
consensus TTTCAGAAATGGGGCGACCCCATTCCTTTATAGCCTTCATGGCAGCTTCTTTGCCCAGCT
. : . : . : . : . : . :
JMFF047I07+ TTGGAACTTCCGACACCAAAATGTCTTGCCTGGTGTTAAGTGAAGCTTCGTTGTATGTGC
JMFF047I10+ TAGGAACCCCCGACACCAAAATGTCTTGCCTGGTGTTAAGGGAAGCTTCGTTGTATGTGC
____________________________________________________________
consensus TTGGAACTTCCGACACCAAAATGTCTTGCCTGGTGTTAAGTGAAGCTTCGTTGTATGTGC
. : . : . : . : . : . :
JMFF047I07+ ACAAGTTGGGATTTTTCTTCAATAATTCTTCTGTTATAACCAGGTGACGTTTCCTAATCT
JMSF009M09+ AATCT
JMFF047I10+ ACAAGTTGGGATGTTTCTTCAATAATTCTTCTGTTAAAACCAGGTGACGTTTCATAATCT
____________________________________________________________
consensus ACAAGTTGGGATTTTTCTTCAATAATTCTTCTGTTATAACCAGGTGACGTTTCCTAATCT
. : . : . : . : . : . :
JMFF047I07+ TGCTCTTGTTGCAGATGCGTCTAAACTTTTCTTTATGTTCCAGCAAGTGTTCACTATTTG
JMSF009M09+ TGCTCTTGTTGCAGATGCGTCTAAACTTTTCTTTATGTTCCAGCAAGTGTTCACTATTTG
JMFF047I10+ TGCTCTTGTTGCAGATGCGTCTAAACTTTTCTTTATGTTCCAGCAAGTGTTGGCTATTTG
____________________________________________________________
consensus TGCTCTTGTTGCAGATGCGTCTAAACTTTTCTTTATGTTCCAGCAAGTGTTCACTATTTG
. : . : . : . : . : . :
JMFF047I07+ TGATGCGAAAATAAAAGTCTGGATAGGTGGTTTGGTCAACCCAATTCGCCGGAATTGCGG
JMSF009M09+ TGATGCGAAAATAAAAGTCTGGATAGGTGGTTTGGTCAACCCAATTCGCCGGAATTGCGG
JMFF047I10+ TGATGCGGAAATAAAAGTCTGGATAGGTAGTTTGGTCAACCCAATTCGCCGGAGTTGCGG
____________________________________________________________
consensus TGATGCGAAAATAAAAGTCTGGATAGGTGGTTTGGTCAACCCAATTCGCCGGAATTGCGG
. : . : . : . : . : . :
JMFF047I07+ TTCCTATCGCCAAGATTTTGGCATGTCCTTCGATCCTCTTTTCCCTACGGGTCCAGGTAT
JMSF009M09+ TTCCTATCGCCAAGATTTTGGCATGTCCTTCGATCCTCTTTTCCCTACGGGTCCAGGTAT
JMFF047I10+ TTCCTATGGCCAAGATTTTGGCATCACCTTCTAACCTCTTTGCCCTATGGCTCCAGGTAT
____________________________________________________________
consensus TTCCTATCGCCAAGATTTTGGCATGTCCTTCGATCCTCTTTTCCCTACGGGTCCAGGTAT
. : . : . : . : . : . :
JMFF047I07+ TAGTGAGGA
JMSF009M09+ TAGTGAGGA
JMFF047I10+ CAGTGAGGACAGTGATGGTTGTAGACATTTTTGTTTTGCTGATCAGTGATGATTTAAGGC
____________________________________________________________
consensus TAGTGAGGACAGTGATGGTTGTAGACATTTTTGTTTTGCTGATCAGTGATGATTTAAGGC
. : . : . : . : . : . :
JMFF047I10+ TTCACTGTTTAGTGAGAAATGTGCTTAATTCGCATGCATGATAATGGCTAGCTGCCTGCC
____________________________________________________________
consensus TTCACTGTTTAGTGAGAAATGTGCTTAATTCGCATGCATGATAATGGCTAGCTGCCTGCC