Contig 008880:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047D01Sequence634008880 (2)ref|XP_006394793.1|4e-33hypothetical protein EUTSA_v10004860mg [Eutrema salsugineum] gb|ESQ32079.1| hypo450008880 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF047D01- GAGCAAGATTCTTATACATACTAAAAAGTCCGAATCGATTTTTGTCATTATCTTCTTG
                      ____________________________________________________________
consensus GAGCAAGATTCTTATACATACTAAAAAGTCCGAATCGATTTTTGTCATTATCTTCTTG
 
. : . : . : . : . : . :
rJMFF047D01- GGCAACCCCATCATGCAAGGGCTTTCTAATGCGGTTTACCTTGCCGAGGGTTAATCATGG
                      ____________________________________________________________
consensus GGCAACCCCATCATGCAAGGGCTTTCTAATGCGGTTTACCTTGCCGAGGGTTAATCATGG
 
. : . : . : . : . : . :
rJMFF047D01- CAATAACACAAACTTTTTTGATGGCTAATCCTTTATGTGCAATTGAAGGAAATCCCAAGA
                      ____________________________________________________________
consensus CAATAACACAAACTTTTTTGATGGCTAATCCTTTATGTGCAATTGAAGGAAATCCCAAGA
 
. : . : . : . : . : . :
rJMFF047D01- GCTACCAGTGCATGTAAAAAGCATGGATTCTTGCTTCATATAAAAGCAAAAAACATCCCA
                      ____________________________________________________________
consensus GCTACCAGTGCATGTAAAAAGCATGGATTCTTGCTTCATATAAAAGCAAAAAACATCCCA
 
. : . : . : . : . : . :
rJMFF047D01- AGCAACAATAAACAACTTCAACAAAGGCCAATAATGACAATAACTAATCCTCACTTCAAA
                      ____________________________________________________________
consensus AGCAACAATAAACAACTTCAACAAAGGCCAATAATGACAATAACTAATCCTCACTTCAAA
 
. : . : . : . : . : . :
rJMFF047D01- CTATCACTGTTCTTGAACTCTGCAAAGAAACATCAGACATGTCATCATACTTTCACCTCT
JMFF047D01+ CATCAGACATGTCATCATACTTTCACCTCT
                      ____________________________________________________________
consensus CTATCACTGTTCTTGAACTCTGCAAAGAAACATCAGACATGTCATCATACTTTCACCTCT
 
. : . : . : . : . : . :
rJMFF047D01- CAAATCCTTCACAAAGTCTCCTTGACAGTAAACTATTTCCTCCCTTCCTGGCTGCCAACA
JMFF047D01+ CAAATCTTTCACAAAGTCTCGGTGACAGTAAGCTATTTCCTCCCTTCCTGGCTGCCAGCA
                      ____________________________________________________________
consensus CAAATCTTTCACAAAGTCTCGTTGACAGTAAGCTATTTCCTCCCTTCCTGGCTGCCAGCA
 
. : . : . : . : . : . :
rJMFF047D01- ATGGTGTTCTTCAGAATATGTCTTAACATCTG
JMFF047D01+ GTGGTGTTCTTCAGAATATGTCTTAGCATCTGGTTTTCATTTTGCAAGGTGGACAGCCTC
                      ____________________________________________________________
consensus GTGGTGTTCTTCAGAATATGTCTTAGCATCTGGTTTTCATTTTGCAAGGTGGACAGCCTC
 
. : . : . : . : . : . :
JMFF047D01+ TCTTCAAGCTCAGCATTCTTTGTTTCCAAGTCTTTCACCCTTCCCTCCAAGTCTATCAAA
                      ____________________________________________________________
consensus TCTTCAAGCTCAGCATTCTTTGTTTCCAAGTCTTTCACCCTTCCCTCCAAGTCTATCAAA
 
. : . : . : . : . : . :
JMFF047D01+ TATGCCTTCTTCCTCTCCCTTGCTTGCTGTGCTGAAACTCTGTTCCTCAGAGCAACCTTT
                      ____________________________________________________________
consensus TATGCCTTCTTCCTCTCCCTTGCTTGCTGTGCTGAAACTCTGTTCCTCAGAGCAACCTTT
 
. : . : . : . : . : . :
JMFF047D01+ TTAACCTCTTGTTCTCTTTGTCAGCTGGGCTTCTGCCCCTCTTCCTTTGAGTGGCGGCGG
                      ____________________________________________________________
consensus TTAACCTCTTGTTCTCTTTGTCAGCTGGGCTTCTGCCCCTCTTCCTTTGAGTGGCGGCGG
 
. : . : . : . : . : . :
JMFF047D01+ AATGGTGAACGGGACCCGCCGCAGAGGTGCCATCCCGGCCTGAAGCAGCCGGACCGGCGG
                      ____________________________________________________________
consensus AATGGTGAACGGGACCCGCCGCAGAGGTGCCATCCCGGCCTGAAGCAGCCGGACCGGCGG
 
. : . : . : . : . : . :
JMFF047D01+ CTTCTCCACCCATCTCAGGCACTCTCCTGCTCTCATCATCACTCTCCACACCTTCTTTAA
                      ____________________________________________________________
consensus CTTCTCCACCCATCTCAGGCACTCTCCTGCTCTCATCATCACTCTCCACACCTTCTTTAA
 
. : . : . : . : . : . :
JMFF047D01+ CTTCGGGCTGGAGAGCTGAGCTGGAAGATCTTTCGCTGCTTGAAGGAAGAGAACTGGCAG
                      ____________________________________________________________
consensus CTTCGGGCTGGAGAGCTGAGCTGGAAGATCTTTCGCTGCTTGAAGGAAGAGAACTGGCAG
 
. : . : . : . : . : . :
JMFF047D01+ CCATGGAACTCGTAGCAGCTTGTTCCTGCATTTTCCTCCAAAACAACGGAAAATGTACAG
                      ____________________________________________________________
consensus CCATGGAACTCGTAGCAGCTTGTTCCTGCATTTTCCTCCAAAACAACGGAAAATGTACAG
 
. : . : . : . : . : . :
JMFF047D01+ AAACAGAGAGAGAGAGAGAGGATAAACGTGGTATATTGATCTGGGAAAAAAAAAGAGCCA
                      ____________________________________________________________
consensus AAACAGAGAGAGAGAGAGAGGATAAACGTGGTATATTGATCTGGGAAAAAAAAAGAGCCA