Contig 008877:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013C15Sequence554008877 (4)ref|XP_009605087.1|183PREDICTED: uncharacterized protein LOC104099715 [Nicotiana tomentosiformis] ref|
JMFF039K06Sequence636008877 (4)ref|XP_009777799.1|184PREDICTED: uncharacterized protein LOC104227277 [Nicotiana sylvestris] ref|XP_00
JMFF046G19Sequence647008877 (4)ref|XP_009605087.1|205PREDICTED: uncharacterized protein LOC104099715 [Nicotiana tomentosiformis] ref|513014918ref|XP_009783675.1|95.5PREDICTED: uncharacterized protein LOC104232233 [Nicotiana sylvestris]
JMSF023F13Sequence702008877 (4)ref|XP_009605087.1|262PREDICTED: uncharacterized protein LOC104099715 [Nicotiana tomentosiformis] ref|772002855 (2)ref|XP_009777799.1|366PREDICTED: uncharacterized protein LOC104227277 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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JMSF023F13+                                                    TAAACCGCCATGCCATGTG
                      ____________________________________________________________
consensus                                                      TAAACCGCCATGCCATGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039K06+                                            CCCAAACTNGTAAAAATGTACATCCTT
JMSF023F13+           GCAGGAGGTCTCGTTCGAGCCAGGGACGGGCTTCCCAAACTTGTAAAAATGTACATCCTT
                      ____________________________________________________________
consensus             GCAGGAGGTCTCGTTCGAGCCAGGGACGGGCTTCCCAAACTTGTAAAAATGTACATCCTT
 
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JMFF039K06+           GAACTTCTCAATAGTAGCTTTCATCAACAAATGGAACACATCCGGGTCCCTTACAGTCAA
JMFF013C15+                                                            CTTACAGTCAA
JMSF023F13+           GAACTTCTCAATAGTAGCTTTCATCAACAAATGGAACACATCCGGGT-CCTTACAGTCAA
JMFF046G19+                       AGTAGCTTTCATCAACAAATGGAACACATCCGGGT-CCTTACAGTCAA
                      ____________________________________________________________
consensus             GAACTTCTCAATAGTAGCTTTCATCAACAAATGGAACACATCCGGGT-CCTTACAGTCAA
 
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JMFF039K06+           TAGGCTCATCCGTTTTTCCTTGGCATTCAAGTTCATTACCAGTTTCAGTTTCGGTGACTG
JMFF013C15+           TAGGCTCATCCGTTTTTCCTTGGCATTCAAGTTCATTACCAGTTTCAGTTTCGGTGACTG
JMSF023F13+           TAGGCTCATCCGTTTTTCCTTGGCATTCAAGTTCATTACCAGTTTCAGTTTCGGTGACTG
JMFF046G19+           TAGGCTCATCCGTTTTTCCTTGGCATTCAAGTTCATTACCAGTTTCAGTTTCGGTGACTG
                      ____________________________________________________________
consensus             TAGGCTCATCCGTTTTTCCTTGGCATTCAAGTTCATTACCAGTTTCAGTTTCGGTGACTG
 
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JMFF039K06+           GCATCGCAATATCAACATCAGTAAGGTTAATAAAGGTGGCAAATGCAGTCTGATTTGCAC
JMFF013C15+           GCATCGCAATATCAACATCAGTAAGGTTAATAAAGGTGGCAAATGCAGTCTGATTTGCAC
JMSF023F13+           GCATCGCAATATCAACATCAGTAAGGTTAATAAAGGTGGCAAATGCAGTCTGATTTGCAC
JMFF046G19+           GCATCGCAATATCAACATCAGTAAGGTTAATAAAGGTGGCAAATGCAGTCTGATTTGCAC
                      ____________________________________________________________
consensus             GCATCGCAATATCAACATCAGTAAGGTTAATAAAGGTGGCAAATGCAGTCTGATTTGCAC
 
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JMFF039K06+           CAATAAAGTCCTCCCCCGTCTTTACCACCGTGTCATCAGCTTTAAATGTGGCATTTGATT
JMFF013C15+           CAATAAAGTCCTCCCCCGTCTTTACCACCGTGTCATCAGCTTTAAATGTGGCATTTGATT
JMSF023F13+           CAATAAAGTCCTCCCCCGTCTTTACCACCGTGTCATCAGCTTTAAATGTGGCATTTGATT
JMFF046G19+           CAATAAAGTCCTCCCCCGTCTTTACCACCGTGTCATCAGCTTTAAATGTGGCATTTGATT
                      ____________________________________________________________
consensus             CAATAAAGTCCTCCCCCGTCTTTACCACCGTGTCATCAGCTTTAAATGTGGCATTTGATT
 
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JMFF039K06+           TGGATGTAAGAAAATTAGTCATCTTAGCAGAAGGGTGAAACAATGGATCTTCAGGCTGAT
JMFF013C15+           TGGATGTAAGAAAATTAGTCATCTTAGCAGAAGGGTGAAACAATGGATCTTCAGGCTGAT
JMSF023F13+           TGGATGTAAGAAAATTAGTCATCTTAGCAGAAGGGTGAAACAATGGATCTTCAGGCTGAT
JMFF046G19+           TGGATGTAAGAAAATTAGTCATCTTAGCAGAAGGGTGAAACAATGGATCTTCAGGCTGAT
                      ____________________________________________________________
consensus             TGGATGTAAGAAAATTAGTCATCTTAGCAGAAGGGTGAAACAATGGATCTTCAGGCTGAT
 
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JMFF039K06+           AAGTGGCCGCTATTATAGTGAAAATCAAGACCACAAGTACAAATACCGTGAAACCGAGGT
JMFF013C15+           AAGTGGCCGCTATTATAGTGAAAATCAAGACCACAAGTACAAATACCGTGAAACCGAGGT
JMSF023F13+           AAGTGGCCGCTATTATAGTGAAAATCAAGACCACAAGTACAAATACCGTGAAACCGAGGT
JMFF046G19+           AAGTGGCCGCTATTATAGTGAAAATCAAGACCACAAGTACAAATACCGTGAAACCGAGGT
                      ____________________________________________________________
consensus             AAGTGGCCGCTATTATAGTGAAAATCAAGACCACAAGTACAAATACCGTGAAACCGAGGT
 
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JMFF039K06+           TCCTTATCATAGCCAGTGCATCTTGCCCTAAATTCTCCGGCCTAAAACCTGCATTCCTTG
JMFF013C15+           TCCTTATCATAGCCAGTGCATCTTGCCCTAAATTCTCCGGCCTAAAACCTGCATTCCTTG
JMSF023F13+           TCCTTATCATAGCCAGTGCATCTTGCCCTAAATTCTCCGGCCTAAAACCTGCATTCCTTG
JMFF046G19+           TCCTTATCATAGCCAGTGCATCTTGCCCTAAATTCTCCGGCCTAAAACCTGCATTCCTTG
                      ____________________________________________________________
consensus             TCCTTATCATAGCCAGTGCATCTTGCCCTAAATTCTCCGGCCTAAAACCTGCATTCCTTG
 
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JMFF039K06+           ATCCCCAAACCGTTGACCGACCCATCATTCTTTCTACCCTCAGAAACCACAATCTCCAAA
JMFF013C15+           ATCCCCAAACCGTTGACCGACCCATCATTCTTTCTACCCTCAGAAACCACAATCTCCAAA
JMSF023F13+           ATCCCCAAACCGTTGACCGACCCATCATTCTTTCTACCCTCAGAAACCACAATCTCCAAA
JMFF046G19+           ATCCCCAAACCGTTGACCGACCCATCATTCTTTCTACCCTCAGAAACCACAATCTCCAAA
                      ____________________________________________________________
consensus             ATCCCCAAACCGTTGACCGACCCATCATTCTTTCTACCCTCAGAAACCACAATCTCCAAA
 
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JMFF039K06+           GCAAATCGGGAAAATAACAGACTTAAAAGCTGATTTAATCTTACAATTAGGCTAGCATTT
JMFF013C15+           GCAAATCGGGAAAATAACAGACTTAAAAGCTGATTTAATCTTACAATTAGGCTAGCATTT
JMSF023F13+           GCAAATCGGGAAAATAACAGACTTAAAAGCTGATTTAATCTTACAATTAGGCTAGCATTT
JMFF046G19+           GCAAATCGGGAAAATAACAGACTTAAAAGCTGATTTAATCTTACAATTAGGCTAGCATTT
                      ____________________________________________________________
consensus             GCAAATCGGGAAAATAACAGACTTAAAAGCTGATTTAATCTTACAATTAGGCTAGCATTT
 
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JMFF039K06+           AGAGATTGCGGATGATCTATCGAAGCATTGCCCACACTTTCTCTCTGTGTGGAGTGGAGT
JMFF013C15+           AGAGATTGCGGATGATCTATCGAAGCATTGCCCACACTTTCTCTCTGTGTGGAGTGGAGT
JMSF023F13+           AGAGATTGCGGATGATCTATCGAAGCATTGCCCACACTTTCTCTCTGTGTGGAGTGGAGT
JMFF046G19+           AGAGATTGCGGATGATCTATCGAAGCATTGCCCACACTTTCTCTCTGTGTGGAGTGGAGT
                      ____________________________________________________________
consensus             AGAGATTGCGGATGATCTATCGAAGCATTGCCCACACTTTCTCTCTGTGTGGAGTGGAGT
 
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JMFF039K06+           GGA                                                         
JMFF013C15+           GGA                                                         
JMSF023F13+           GGAGTGGAGCTCCTTACTTCCTT                                     
JMFF046G19+           GGAGTGGAGCTCCTTACTTCCTTAGGGGGAGGGGGGTTAAGTCAGCGGTGATTTGATTAT
                      ____________________________________________________________
consensus             GGAGTGGAGCTCCTTACTTCCTTAGGGGGAGGGGGGTTAAGTCAGCGGTGATTTGATTAT