Contig 008865:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036C15Sequence570008865 (2)emb|CDP18567.1|2e-54unnamed protein product [Coffea canephora]689013767 (2)gb|AAD02557.1|3e-91PGPS/NH15 [Petunia x hybrida]
JMFF044F20Sequence619008865 (2)ref|XP_006341879.1|9e-76PREDICTED: L-ascorbate oxidase homolog [Solanum tuberosum]577008323 (9)gb|AAD02557.1|3e-74PGPS/NH15 [Petunia x hybrida]

Alignment

This contig is upended


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JMFF044F20+                                                    TGAATTCCTCAGCGGGTCT
                      ____________________________________________________________
consensus                                                      TGAATTCCTCAGCGGGTCT
 
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JMFF044F20+           ATCGAATGGGACAGGGATGAGTTCACGGCTATGGACATTGATTGGGCCATAGCCGCCCAC
                      ____________________________________________________________
consensus             ATCGAATGGGACAGGGATGAGTTCACGGCTATGGACATTGATTGGGCCATAGCCGCCCAC
 
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JMFF044F20+           GGCACGTTGTAGACTAGTGGTTGGGAAATAAAAATAGCTTCCGATCTGGTCTTTCACCTG
                      ____________________________________________________________
consensus             GGCACGTTGTAGACTAGTGGTTGGGAAATAAAAATAGCTTCCGATCTGGTCTTTCACCTG
 
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JMFF044F20+           GAACTTATAGGTAAAGTTAGTGCCAGGCAGGATAGGGCACATGGTCCCGGGAGTGCCATC
                      ____________________________________________________________
consensus             GAACTTATAGGTAAAGTTAGTGCCAGGCAGGATAGGGCACATGGTCCCGGGAGTGCCATC
 
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JMFF036C15+                                                            GGCTCATCCAG
JMFF044F20+           AACCCATGAATTCTTCCTTTGCTGGATGCCACTCCAAGTGAACAATAATGGCTCATCTAG
                      ____________________________________________________________
consensus             AACCCATGAATTCTTCCTTTGCTGGATGCCACTCCAAGTGAACAATAATGGCTCATCTAG
 
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JMFF036C15+           CTCGTTGAAAACGTTAACAATAATGTTATTATTAGATGTACAATTGATCTTAGGACCTGG
JMFF044F20+           CTCGTTGAAAACGTTAACAATAACGTTGTTGTTGGAGGTGCAATTGATCTTAGGACCTGG
                      ____________________________________________________________
consensus             CTCGTTGAAAACGTTAACAATAATGTTGTTGTTGGATGTGCAATTGATCTTAGGACCTGG
 
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JMFF036C15+           GAACTGGCCGTTGATGAGGATGCCTTGTTGGGGGACGCCCATGGGGGAAATGGTGCCATA
JMFF044F20+           GAATTGGCCGTTGATGAGAATGACTTGTTGAGGTACACCCATGGGTGAAATGGTGCCATA
                      ____________________________________________________________
consensus             GAATTGGCCGTTGATGAGGATGCCTTGTTGGGGTACGCCCATGGGTGAAATGGTGCCATA
 
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JMFF036C15+           GGTCACCTTCCAAGTGAAGAA                                       
JMFF044F20+           GGTCACCTTCCAAGTGTAGAATAGATAAGGGTCCTCCGCCCTCACGGTGGTGGAGAGGCA
                      ____________________________________________________________
consensus             GGTCACCTTCCAAGTGTAGAATAGATAAGGGTCCTCCGCCCTCACGGTGGTGGAGAGGCA
 
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JMFF044F20+           AAGTAGAAAGGCCACCAGCATTATTGTGCTAGCTCTATCCATGGCTACCCCGAATTTTAT
                      ____________________________________________________________
consensus             AAGTAGAAAGGCCACCAGCATTATTGTGCTAGCTCTATCCATGGCTACCCCGAATTTTAT
 
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JMFF044F20+           TTTATTTTTTTGGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAATGAATTGGATAA
                      ____________________________________________________________
consensus             TTTATTTTTTTGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATGAATTGGATAA
 
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JMFF044F20+           GAAGAAGAAGAGGAAGAGGGGCTACTCTTCTCCTAAATATTATTGCTCTTATCAGAGCTT
                      ____________________________________________________________
consensus             GAAGAAGAAGAGGAAGAGGGGCTACTCTTCTCCTAAATATTATTGCTCTTATCAGAGCTT