Contig 008850:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025K16Sequence560008850 (5)gb|KJB06867.1|2e-24hypothetical protein B456_001G018300 [Gossypium raimondii]703009729 (4)ref|XP_009786706.1|9e-82PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Nicotiana sylves
JMFF041E12Sequence615008850 (5)545008993 (14)
JMFS123E03Sequence558008850 (5)
JMFS125H11Sequence568008850 (5)
JMSF020A15Sequence570008850 (5)ref|XP_009621382.1|6e-08PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Nicotiana toment628009729 (4)ref|XP_009786706.1|5e-88PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Nicotiana sylves

Alignment

This contig is upended


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JMFF025K16+                                          TGCCGGCGAAGCCTTCAATGCATGTATCT
                      ____________________________________________________________
consensus                                            TGCCGGCGAAGCCTTCAATGCATGTATCT
 
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JMFF025K16+           TGGTTGATCAGTGCAGCACTTAACCATGTCCTTAAATCATCGCTCAGATTTCCGGTGCTA
JMSF020A15+                                                              CCGGTGCTA
                      ____________________________________________________________
consensus             TGGTTGATCAGTGCAGCACTTAACCATGTCCTTAAATCATCGCTCAGATTTCCGGTGCTA
 
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JMFF025K16+           TTATCTTTTTTCCCGATATTAGGATTCTGGGAAGCGTCGAGAGTCCAAGAAAGTTCATCG
JMSF020A15+           TTATCTTTTTTCCCGATATTAGGATTCTGGGAAGNGTCGAGAGTCCAAGAAAGTTCATCG
                      ____________________________________________________________
consensus             TTATCTTTTTTCCCGATATTAGGATTCTGGGAAGCGTCGAGAGTCCAAGAAAGTTCATCG
 
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JMFF025K16+           GCGGAGAGGTCCAGCAGATCAAGGCAATCGGAAACCGCCGTAGCAAGCCGGAAGTCGCCG
JMSF020A15+           GCGGAGAGGTCCAGCAGATCAAGGCAATCGGAAACCGCCGTAGCAAGCCGGAAGTCGCCG
                      ____________________________________________________________
consensus             GCGGAGAGGTCCAGCAGATCAAGGCAATCGGAAACCGCCGTAGCAAGCCGGAAGTCGCCG
 
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JMFF025K16+           AAAACATTGGCGAATTTGGCCACGGCGGAAGCGACATCCTTGACGGCGTCCAAGGTGGAC
JMSF020A15+           AAAACATTGGCGAATTTGGCCACGGCGGAAGCGACATCCTTGACGGCGTCCAAGGTGGAC
                      ____________________________________________________________
consensus             AAAACATTGGCGAATTTGGCCACGGCGGAAGCGACATCCTTGACGGCGTCCAAGGTGGAC
 
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JMFF025K16+           TTGACGGATCCCACGAACTCCGTCGCCGGCACCCTCAAGCACTCCGACGGGATGAAATCC
JMSF020A15+           TTGACGGATCCCNCGAANTCCGTCGCCGGCACCCTCAAGCACTCCGACGGGATGAAATCC
JMFF041E12+                                                       CGACGGGATGAAATCC
                      ____________________________________________________________
consensus             TTGACGGATCCCACGAACTCCGTCGCCGGCACCCTCAAGCACTCCGACGGGATGAAATCC
 
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JMFF025K16+           AACTCCCCGGCGCCGGAGCTCCCCGACCCAAACGAACACAACAGAATTGCCACCAACAAG
JMSF020A15+           AACTCCCCGGCGCCGGAGCTCCCCGANCCAAANGAACACAACAGAATTGCCACCAACAAG
JMFS125H11+                 CCGGCGCCGGAGCTCNCCGACCCAAACGAACACAACAGAATTGCCACCAACAAG
JMFS123E03+                                  CGACCCAAACGAACACAACAGAATTGCCACCAACAAG
JMFF041E12+           AACTCNCCGGCGCCGGAGCTCCCCGACCCAAACGAACACAACAGAATTGCCACCAACAAG
                      ____________________________________________________________
consensus             AACTCCCCGGCGCCGGAGCTCCCCGACCCAAACGAACACAACAGAATTGCCACCAACAAG
 
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JMFF025K16+           ACAACAACAGTAGTCCCCGAAGGCGCCATTTTACACAACCCACACTCCTAATTTCCCGCA
JMSF020A15+           ACAACAACAGTAGTCCCCGAAGGCGCCATTTTACACAACCCACACTCNTAATTTCCCGCA
JMFS125H11+           ACAACAACAGTAGTCCCCGAAGGCGCCATTTTACACAACCCACACTCCTAATTTCCCGCA
JMFS123E03+           ACAACAACAGTAGTCCCCGAAGGCGCCATTTTACACAACCCACACTCCTAATTTCCCGCA
JMFF041E12+           ACAACAACAGTAGTCCCCGAAGGCGCCATTTTACACAACCCACACTCCTAATTTCCCGCA
                      ____________________________________________________________
consensus             ACAACAACAGTAGTCCCCGAAGGCGCCATTTTACACAACCCACACTCCTAATTTCCCGCA
 
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JMFF025K16+           ACAACTATGATATACGTACGACCACTCAACTATTATTATTAATTTTTTCCGACGTAACAC
JMSF020A15+           ACAACTNTGATATACGTACGACCACTCAACTATTATTATTAATTTTTTCCGANGTAACAC
JMFS125H11+           ACAACTATGATATACGTACGACCACTCAACTATTATTATTAATTTTTTCCGACGTAACAC
JMFS123E03+           ACAACTATGATATACGTACGACCACTCAACTATTATTATTAATTTTTTCCGACGTAACAC
JMFF041E12+           ACAACTATGATATACGTACGACCACTCAACTATTATTATTAATTTTTTCCGACGTAACAC
                      ____________________________________________________________
consensus             ACAACTATGATATACGTACGACCACTCAACTATTATTATTAATTTTTTCCGACGTAACAC
 
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JMFF025K16+           TAACAAGAAACAACAGATTAAACCAAGACAGTACGATGAACAAAACAAGTA         
JMSF020A15+           TAACAAGAAACAACAGATTAAACCAAGACAGTACGATGAACAAAACAAGTACAGTTTGGG
JMFS125H11+           TAACAAGAAACAACAGATTAAACCAAGACAGTACGATGAACAAAACAAGTACAGTTTGGG
JMFS123E03+           TAACAAGAAACAACAGATTAAACCAAGACAGTACGATGAACAAAACAAGTACAGTTTGGG
JMFF041E12+           TAACAAGAAACAACAGATTAAACCAAGACAGTACGATGAACAAAACAAGTACAGTTTGGG
                      ____________________________________________________________
consensus             TAACAAGAAACAACAGATTAAACCAAGACAGTACGATGAACAAAACAAGTACAGTTTGGG
 
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JMSF020A15+           ACCAAATAACGGTCTGGGCAGTTCAAAAACCCAATC-TTTTTTTTCTCTTTAAAATTAAA
JMFS125H11+           ACCAAATAACGGTCTGGGCAGTTCAAAAACCCAATC-TTTTTTTTTTCTTTAAAATTAAA
JMFS123E03+           ACCAAATAACGGTCTGGGCAGTTCAAAAACCCAATCTTTTTTTTTTTCTTTAAAATTAAA
JMFF041E12+           ACCAAATAACGGTCTGGGCAGTTCAAAAACCCAATC-TTTTTTTTTTCTTTAAAATTAAA
                      ____________________________________________________________
consensus             ACCAAATAACGGTCTGGGCAGTTCAAAAACCCAATC-TTTTTTTTTTCTTTAAAATTAAA
 
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JMSF020A15+           AAATATTGTGAGTTTGGAGT                                        
JMFS125H11+           AAATATTGTGAGTTTGGAGTGAGGGAAGGGTGGGGATGTCTGTGTGTATATATATATATA
JMFS123E03+           AAATATTGTGAGTTTGGAGTGAGGGAAGGGTGGGGATGTCTGTGTGTATATATATATATA
JMFF041E12+           AAATATTGTGAGTTTGGAGTGAGGGAAGGGTGGGGATGTCTGTGTGTATATATATATATA
                      ____________________________________________________________
consensus             AAATATTGTGAGTTTGGAGTGAGGGAAGGGTGGGGATGTCTGTGTGTATATATATATATA
 
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JMFS125H11+           TATATATGATTATATTATTTATATATACACACACAGTAAGTCAGTAATGGAAGCTGAGGA
JMFS123E03+           TATATATGATTATATTATTTATATATACACACACAGTAAGTCAGTAATGGAAGCTGAGGA
JMFF041E12+           TATATATGATTATATTATTTATATATACACACACAGTAAGTCAGTAATGGAAGCTGAGGA
                      ____________________________________________________________
consensus             TATATATGATTATATTATTTATATATACACACACAGTAAGTCAGTAATGGAAGCTGAGGA
 
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JMFS125H11+           AGAGAGGGGTTTCATTTAATGGTGTTGTCGGCTGACAGGTGAGGGCATTGATGATTGATG
JMFS123E03+           AGAGAGGGGTTTCATTTAATGGTGTTGTCGGCTGACAGGTGAGGGCATTGATGATTGATG
JMFF041E12+           AGAGAGGGGTTTCATTTAATGGTGTTGTCGGCTGACAGGTGAGGGCATTGATGATTGATG
                      ____________________________________________________________
consensus             AGAGAGGGGTTTCATTTAATGGTGTTGTCGGCTGACAGGTGAGGGCATTGATGATTGATG
 
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JMFS125H11+           GATGAGAGATAGAATGATAGAAAGAGGATAGGGAAGAACGTGCGAGTTGTATTTAGCAAT
JMFS123E03+           GATGAGAGATAGAATGATAGAAAGAGGATAGGGAAGAACGTGCGAGTTGTATTTAGCAAT
JMFF041E12+           GATGAGAGATAGAATGATAGAAAGAGGATAGGGAAGAACGTGCGAGTTGTATTTAGCAAT
                      ____________________________________________________________
consensus             GATGAGAGATAGAATGATAGAAAGAGGATAGGGAAGAACGTGCGAGTTGTATTTAGCAAT
 
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JMFS125H11+           TAATATATGCTGTGAGCTTCATTTGATCTAA                             
JMFS123E03+           TAATATATGCTGTGAGCTTCATTTGATCTAACAAACAACCT                   
JMFF041E12+           TAATATATGCTGTGAGCTTCATTTGATCTAACAAACAACCTTACAAATCGTCTCTGCTGT
                      ____________________________________________________________
consensus             TAATATATGCTGTGAGCTTCATTTGATCTAACAAACAACCTTACAAATCGTCTCTGCTGT