Contig 008832:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G04Sequence607008832 (3)gb|KDO53080.1|4e-107hypothetical protein CISIN_1g014803mg [Citrus sinensis]698008366 (3)ref|XP_010242741.1|4e-42PREDICTED: calreticulin-3-like [Nelumbo nucifera]
JMFF036F22Sequence536008832 (3)gb|KDO53080.1|6e-89hypothetical protein CISIN_1g014803mg [Citrus sinensis]744008366 (3)ref|XP_010086719.1|5e-51hypothetical protein L484_016150 [Morus notabilis] gb|EXB23135.1| hypothetical p
JMFF047E07Sequence470008832 (3)ref|XP_007131934.1|3e-76hypothetical protein PHAVU_011G053000g [Phaseolus vulgaris] gb|ESW03928.1| hypot351008366 (3)

Alignment

This contig is upended


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JMFF011G04+                                                                GTTATCA
                      ____________________________________________________________
consensus                                                                  GTTATCA
 
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JMFF011G04+           ATAAGGATACTATATGTTGCATCCGGCCTTATAATGAATGTGTAGAAATGAGTTAACTTA
                      ____________________________________________________________
consensus             ATAAGGATACTATATGTTGCATCCGGCCTTATAATGAATGTGTAGAAATGAGTTAACTTA
 
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JMFF011G04+           TCTGTTTCACACTCTAACTCCTTTTTTATGGGATAATTTTGTCCCTGATAGGAAACGATA
JMFF036F22+               TTTCACACTCTAACTCCTTTTTTATGGGATAATTTTGTCCCTGATAGGAAACGATA
                      ____________________________________________________________
consensus             TCTGTTTCACACTCTAACTCCTTTTTTATGGGATAATTTTGTCCCTGATAGGAAACGATA
 
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JMFF011G04+           GCATGGAGCTTCTTTGTCTGTGTGCCACAGATATCTGGTCCAAACATAAGACTGTATGGC
JMFF047E07+           GCATGGAGCTTCTTTGTCTGTGTGCCACAGATATCTGGTCCAAACATAAGACTGTATGGC
JMFF036F22+           GCATGGAGCTTCTTTGTCTGTGTGCCACAGATATCTGGTCCAAACATAAGACTGTATGGC
                      ____________________________________________________________
consensus             GCATGGAGCTTCTTTGTCTGTGTGCCACAGATATCTGGTCCAAACATAAGACTGTATGGC
 
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JMFF011G04+           GTGTCACCTCCAAATTTCTTCTGGTTGACATAACCAGAGAGAAGCTTAATATATCCACCA
JMFF047E07+           GTGTCACCTCCAAATTTCTTCTGGTTGACATAACCAGAGAGAAGCTTAATATATCCACCA
JMFF036F22+           GTGTCACCTCCAAATTTCTTCTGGTTGACATAACCAGAGAGAAGCTTAATATATCCACCA
                      ____________________________________________________________
consensus             GTGTCACCTCCAAATTTCTTCTGGTTGACATAACCAGAGAGAAGCTTAATATATCCACCA
 
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JMFF011G04+           CCACATTCAATCTCTTGCTCAAATCGGATAGAGTACTGAATCACAAGAGTCCTATTCTTG
JMFF047E07+           CCACATTCAATCTCTTGCTCAAATCGGATAGAGTACTGAATCACAAGAGTCCTATTCTTG
JMFF036F22+           CCACATTCAATCTCTTGCTCAAATCGGATAGAGTACTGAATCACAAGAGTCCTATTCTTG
                      ____________________________________________________________
consensus             CCACATTCAATCTCTTGCTCAAATCGGATAGAGTACTGAATCACAAGAGTCCTATTCTTG
 
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JMFF011G04+           TTGTTTAACTCCAGTATCTTTGCAGATATGGCATAGTGCTTGGCATCAGGGTATGTTAGG
JMFF047E07+           TTGTTTAACTCCAGTATCTTTGCAGATATGGCATAGTGCTTGGCATCAGGGTATGTTAGG
JMFF036F22+           TTGTTTAACTCCAGTATCTTTGCAGATATGGCATAGTGCTTGGCATCAGGGTATGTTAGG
                      ____________________________________________________________
consensus             TTGTTTAACTCCAGTATCTTTGCAGATATGGCATAGTGCTTGGCATCAGGGTATGTTAGG
 
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JMFF011G04+           ATACCTCTGTCATCCGGATCACCATGCCACTTGCCGGCAGAGTGCTTAAAACTCCCAGCT
JMFF047E07+           ATACCTCTGTCATCCGGATCACCATGCCACTTGCCGGCAGAGTGCTTAAAACTCCCAGCT
JMFF036F22+           ATACCTCTGTCATCCGGATCACCATGCCACTTGCCGGCAGAGTGCTTAAAACTCCCAGCT
                      ____________________________________________________________
consensus             ATACCTCTGTCATCCGGATCACCATGCCACTTGCCGGCAGAGTGCTTAAAACTCCCAGCT
 
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JMFF011G04+           TTGCCTTCGCTCCTCTTCCAATCTGATATCACCCATCTGTCTCTCCACCCATCTTCGAAG
JMFF047E07+           TTGCCTTCGCTCCTCTTCCAATCTGATATCACCCATCTGTCTCTCCACCCATCTTCGAAG
JMFF036F22+           TTGCCTTCGCTCCTCTTCCAATCTGATATCACCCATCTGTCTCTCCACCCATCTTCGAAG
                      ____________________________________________________________
consensus             TTGCCTTCGCTCCTCTTCCAATCTGATATCACCCATCTGTCTCTCCACCCATCTTCGAAG
 
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JMFF011G04+           CGTTCTTCAAAGAAGATTTCAGAAACAGCAGAGTGGAGGGTAAAGAGAAGTAAGAGAAGG
JMFF047E07+           CGTTCTTCAAAGAAGATTTCAGAAACAGCAGAGTGGAGGGTAAAGAGAAGTAAGAGAAGG
JMFF036F22+           CGTTCTTCAAAGAAGATTTCAGAAACAGCAGAGTGGAGGGTAAAGAGAAGTAAGAGAAGG
                      ____________________________________________________________
consensus             CGTTCTTCAAAGAAGATTTCAGAAACAGCAGAGTGGAGGGTAAAGAGAAGTAAGAGAAGG
 
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JMFF011G04+           GTGAAGACATTATAGGCTTGCATTTGAGCTAGAGGAGGAAGAAGAGAAGGAGTGGTTTGT
JMFF047E07+           GTGAAGACATTATAGGCTTGCATTTGAGCTAGAGGAGGAAGAAGAGAAGG          
JMFF036F22+           GTGAAGACATTATAGGCTTGCATTTGAGCTAGAGGAGGAAGAAGAGAAGGAGTGGATTGT
                      ____________________________________________________________
consensus             GTGAAGACATTATAGGCTTGCATTTGAGCTAGAGGAGGAAGAAGAGAAGGAGTGGTTTGT