clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF010O17 | Sequence | 148 | 008829 (11) | 741 | 007513 (12) | emb|CDP00228.1| | 2e-106 | unnamed protein product [Coffea canephora] | |||
JMFF026O21 | Sequence | 506 | 008829 (11) | ref|XP_006357209.1| | 191 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 732 | 007513 (12) | emb|CDP00228.1| | 9e-94 | unnamed protein product [Coffea canephora] |
JMFF033L08 | Sequence | 464 | 008829 (11) | ref|XP_006357209.1| | 212 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 764 | 007513 (12) | emb|CDP00228.1| | 9e-84 | unnamed protein product [Coffea canephora] |
JMFF034A19 | Sequence | 520 | 008829 (11) | ref|XP_006357209.1| | 182 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 697 | 007513 (12) | emb|CDP00228.1| | 4e-139 | unnamed protein product [Coffea canephora] |
JMFF035I22 | Sequence | 583 | 008829 (11) | ref|XP_006357209.1| | 186 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 749 | 007513 (12) | emb|CDP00228.1| | 2e-105 | unnamed protein product [Coffea canephora] |
JMFF040A10 | Sequence | 530 | 008829 (11) | gb|KJB61188.1| | 2e-42 | hypothetical protein B456_009G345200 [Gossypium raimondii] | 749 | 007513 (12) | emb|CDP00228.1| | 3e-81 | unnamed protein product [Coffea canephora] |
JMFF040K22 | Sequence | 562 | 008829 (11) | ref|XP_006357209.1| | 273 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 751 | 007513 (12) | emb|CDP00228.1| | 2e-82 | unnamed protein product [Coffea canephora] |
JMFF045B12 | Sequence | 483 | 008829 (11) | ref|XP_006357209.1| | 177 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 578 | 007513 (12) | emb|CDP00228.1| | 5e-66 | unnamed protein product [Coffea canephora] |
JMFS014E08 | Sequence | 576 | 008829 (11) | ref|XP_006357209.1| | 231 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | |||||
JMSF010I11 | Sequence | 373 | 008829 (11) | gb|KJB61189.1| | 2e-18 | hypothetical protein B456_009G345200 [Gossypium raimondii] | 803 | 007513 (12) | emb|CDP00228.1| | 4e-107 | unnamed protein product [Coffea canephora] |
JMSF018B13 | Sequence | 514 | 008829 (11) | ref|XP_006357209.1| | 193 | PREDICTED: uncharacterized protein LOC102581459 [Solanum tuberosum] | 802 | 007513 (12) | emb|CDP00228.1| | 1e-95 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF040K22+ ATCCAGCAACGAAAGAAAAGT
____________________________________________________________
consensus ATCCAGCAACGAAAGAAAAGT
. : . : . : . : . : . :
JMFF040K22+ TCCAAGCATCCCTGATGGCATGAGAAATACGGAGATCCCATGTTGCTTCACATATTCCAT
JMFS014E08+ ATATTCCAT
____________________________________________________________
consensus TCCAAGCATCCCTGATGGCATGAGAAATACGGAGATCCCATGTTGCTTCACATATTCCAT
. : . : . : . : . : . :
JMFF040K22+ CTCCGCAGTTTCTTCCCATGATTGAATGTCAAGTGTGTGTTCTCGGGACTGAAAATAGTA
JMFF033L08+ ATGATTGAATGTCAAGTGTGTGTTCTCGGGACTGAAAATAGTA
JMFS014E08+ CTCCGCAGTTTCTTCCCATGATTGAATGTCAAGTGTGTGTTCTCGGGACTGAAAATAGTA
JMFF040A10+ GGACTGAAAATAGTA
____________________________________________________________
consensus CTCCGCAGTTTCTTCCCATGATTGAATGTCAAGTGTGTGTTCTCGGGACTGAAAATAGTA
. : . : . : . : . : . :
JMFF040K22+ ATCCCAAGTTACCCTATAAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
JMFF033L08+ ATCNCAAGTTACCCTATAAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
JMFS014E08+ ATCCCAAGTTACCCTATAAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
JMFF040A10+ ATCCCAAGTTACCCTATAAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
JMFF045B12+ ATATAGATCCATACATGTCCAGCTGTG
JMFF026O21+ ACCCTATAAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
JMSF018B13+ CCAAGTTACCCTNTAAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
JMFF034A19+ GAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
JMFF035I22+ AAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
____________________________________________________________
consensus ATCCCAAGTTACCCTATAAGGAGTAGCAAACACATATAGATCCATACATGTCCAGCTGTG
. : . : . : . : . : . :
JMFF040K22+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMFF033L08+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMFS014E08+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMFF040A10+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMFF045B12+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMFF026O21+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMSF018B13+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMFF034A19+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
JMFF035I22+ TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
____________________________________________________________
consensus TGCTGCCGCTGTAGAGAGATAGATGGTGGCGCCACCGATGTCACGATCGCCGGAACCGTT
. : . : . : . : . : . :
JMFF040K22+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
JMFF033L08+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
JMFS014E08+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
JMFF040A10+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCC-TTCCACCGGATAGACCCGTT
JMFF045B12+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
JMFF026O21+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
JMSF018B13+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
JMFF034A19+ GAGCTCAACCCTAGCTTCATTNTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
JMFF035I22+ GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
____________________________________________________________
consensus GAGCTCAACCCTAGCTTCATTCTCAAAAAAGCACGACCCTTTCCACCGGATAGACCCGTT
. : . : . : . : . : . :
JMFF040K22+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMFF033L08+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMFS014E08+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMFF040A10+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMFF045B12+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMFF026O21+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMSF018B13+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMFF034A19+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMSF010I11+ GAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
JMFF035I22+ GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
____________________________________________________________
consensus GTTCGGAGCGAGCGTCCCGACAAAGATGGGCATCAAATCCGCAGCACTATGGAAGCTATT
. : . : . : . : . : . :
JMFF040K22+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMFF033L08+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMFS014E08+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMFF040A10+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMFF045B12+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMFF026O21+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMSF018B13+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMFF034A19+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMSF010I11+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
JMFF035I22+ GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
____________________________________________________________
consensus GAGGACCGGCCATGAAATCTGACGAGGCAATACCGGAAGCACATCATTCACCCTAAACGG
. : . : . : . : . : . :
JMFF040K22+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMFF033L08+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMFS014E08+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMFF040A10+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMFF045B12+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMFF026O21+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMSF018B13+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMFF034A19+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMSF010I11+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
JMFF035I22+ CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
____________________________________________________________
consensus CACCTTAAAAGCACTCCCAAACCCAAACCCTAACCCTAGAACCCATATCAGCAGAGTCAA
. : . : . : . : . : . :
JMFF040K22+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMFF033L08+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMFS014E08+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMFF040A10+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMFF045B12+ ACTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMFF010O17+ GCCGCCAACAATACATCAGCTAAAAGCTTNAAGNCCAAATCAAACCTAATCC
JMFF026O21+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMSF018B13+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMFF034A19+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMSF010I11+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
JMFF035I22+ TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
____________________________________________________________
consensus TCTCAGCTGCCGCCAACAATACATCAGCTAAAAGCTTAAAGACCAAATCAAACCTAATCC
. : . : . : . : . : . :
JMFF040K22+ T
JMFF033L08+ T
JMFS014E08+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAG
JMFF040A10+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
JMFF045B12+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
JMFF010O17+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
JMFF026O21+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
JMSF018B13+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
JMFF034A19+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
JMSF010I11+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
JMFF035I22+ TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
____________________________________________________________
consensus TTTCGATCCAAAGACAGTGACTTTAAGAATTGTTTTTGGTCTTCTAAATCAGGGTAGGGT
. : . : . : . : . : . :
JMFF040A10+ TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATT
JMFF045B12+ TTGGGTCGTCGATGATGCAATTCATGGAGTCAAATT
JMFF010O17+ TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATT
JMFF026O21+ TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATT
JMSF018B13+ TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATT
JMFF034A19+ TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATTGATCTACTTCTGCTGATGAATGAT
JMSF010I11+ TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATTGATCTACTTCTGCTGATGAATGAT
JMFF035I22+ TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATTGATCTACTTCTGCTGATGAATGAT
____________________________________________________________
consensus TTGGGTCGTCGATGATGCAATTCATGGAGTCTAATTGATCTACTTCTGCTGATGAATGAT
. : . : . : . : . : . :
JMSF010I11+ GCTTCTGTATTGCTCG
JMFF035I22+ GCTTCTGTATTGCTCGTAACGGGTCGGGTTTGAAATTGGGGGAAATGAAAGGGTTAGGTC
____________________________________________________________
consensus GCTTCTGTATTGCTCGTAACGGGTCGGGTTTGAAATTGGGGGAAATGAAAGGGTTAGGTC