Contig 008826:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035A13Sequence617008826 (3)ref|XP_009758520.1|2e-16PREDICTED: probable methyltransferase PMT23 [Nicotiana sylvestris]726006986 (3)ref|XP_009613322.1|5e-89PREDICTED: probable methyltransferase PMT23 [Nicotiana tomentosiformis]
JMFF048H02Sequence410008826 (3)ref|XP_009758520.1|5e-21PREDICTED: probable methyltransferase PMT23 [Nicotiana sylvestris]388006986 (3)gb|KJB67515.1|6e-21hypothetical protein B456_010G195400 [Gossypium raimondii]
JMSF050A10Sequence677008826 (3)ref|XP_009758520.1|3e-49PREDICTED: probable methyltransferase PMT23 [Nicotiana sylvestris]758006986 (3)ref|XP_009631455.1|2e-89PREDICTED: probable methyltransferase PMT23 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF050A10+                                       GCGTCCCCCCGCCGGGAAAGACAAAATAATCC
                      ____________________________________________________________
consensus                                         GCGTCCCCCCGCCGGGAAAGACAAAATAATCC
 
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JMSF050A10+           CCAGATTTCACCACCCACCTCTGGTCCTTTTTGTACTCGACAAGCCTAGGATGCGGCACA
                      ____________________________________________________________
consensus             CCAGATTTCACCACCCACCTCTGGTCCTTTTTGTACTCGACAAGCCTAGGATGCGGCACA
 
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JMSF050A10+           TTGTTATACCATATCATGTCCCGACTCTTGGGCCAGGCCACCGGAGCCCGGTAACCCGCC
                      ____________________________________________________________
consensus             TTGTTATACCATATCATGTCCCGACTCTTGGGCCAGGCCACCGGAGCCCGGTAACCCGCC
 
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JMFF048H02+                                         TCGGGGCAGTGGCGCTCCCGGTGCTCCATA
JMSF050A10+           GGAAGGGGAACCAAACACCTCGGAGGCGGGTCGGGGCAGTGGCGCTCCCGGTGCTCCATA
JMFF035A13+                                                      GCTCCCGGTGCTCCATA
                      ____________________________________________________________
consensus             GGAAGGGGAACCAAACACCTCGGAGGCGGGTCGGGGCAGTGGCGCTCCCGGTGCTCCATA
 
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JMFF048H02+           TGCCTCCTGGACTTCAATGCGCTTATGGCTTTCCAATTATCGAGGCAGGGTATGAAGTCT
JMSF050A10+           TGCCTCCTGGACTTCAATGCGCTTATGGCTTTCCAATTATCGAGGCAGGGTATGAAGTCT
JMFF035A13+           TGCCTCCTGGACTTCAATGCGCTTATGGCTTTCCAATTATCGAGGCAGGGTATGAAGTCT
                      ____________________________________________________________
consensus             TGCCTCCTGGACTTCAATGCGCTTATGGCTTTCCAATTATCGAGGCAGGGTATGAAGTCT
 
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JMFF048H02+           ACTGCCGCCGGATCACGATCATCACAAACCTTCCACCGAATCGAATCCGACTCAGCCCCG
JMSF050A10+           ACTGCCGCCGGATCACGATCATCACAAACCTTCCACCGAATCGAATCCGACTCAGCCCCG
JMFF035A13+           ACTGCCGCCGGATCACGATCATCACAAACCTTCCACCGAATCGAATCCGACTCAGCCCCG
                      ____________________________________________________________
consensus             ACTGCCGCCGGATCACGATCATCACAAACCTTCCACCGAATCGAATCCGACTCAGCCCCG
 
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JMFF048H02+           CCACCGCCGCTGCCGGCTGCAGGCGGAGGGGGAGGAGAGAGAGTTGAAACTGGGTTGGGA
JMSF050A10+           CCACCGCCGCTGCCGGCTGCAGGCGGAGGGGGAGGAGAGAGAGTTGAAACTGGGTTGGGA
JMFF035A13+           CCACCGCCGCTGCCGGCTGCAGGCGGAGGGGGAGGAGAGAGAGTTGAAACTGGGTTGGGA
                      ____________________________________________________________
consensus             CCACCGCCGCTGCCGGCTGCAGGCGGAGGGGGAGGAGAGAGAGTTGAAACTGGGTTGGGA
 
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JMFF048H02+           ACATGAAGCTGAGGTTTAGCGATGTCGGCGGCGAGGTCGAGAGGGGATTTCTGGGAGTTG
JMSF050A10+           ACATGAAGCTGAGGTTTAGCGATGTCGGCGGCGAGGTCGAGAGGGGATTTCTGGGAGTTG
JMFF035A13+           ACATGAAGCTGAGGTTTAGCGATGTCGGCGGCGAGGTCGAGAGGGGATTTCTGGGAGTTG
                      ____________________________________________________________
consensus             ACATGAAGCTGAGGTTTAGCGATGTCGGCGGCGAGGTCGAGAGGGGATTTCTGGGAGTTG
 
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JMFF048H02+           GAAATGAGGAGAAAAGTGAGGACGAAAAGGAGGAGGAAAAGGGAGAGAATGAATGGGAAT
JMSF050A10+           GAAATGAGGAGAAAAGTGAGGACGAAAAGGAGGAGGAAAAGGGAGAGAATGAATGGGAAT
JMFF035A13+           GAAATGAGGAGAAAAGTGAGGACGAAAAGGAGGAGGAAAAGGGAGAGAATGAATGGGAAT
                      ____________________________________________________________
consensus             GAAATGAGGAGAAAAGTGAGGACGAAAAGGAGGAGGAAAAGGGAGAGAATGAATGGGAAT
 
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JMFF048H02+           TTCCTTTCCTTGAAGAGATCTCGAAGTGATGGCGTTGAAGTTGCCATTTCTGGGCACAAT
JMSF050A10+           TTCCTTTCCTTGAAGAGATCTCGAAGTGATGGCGTTGAAGTTGCCATTTCTGGGCACAAT
JMFF035A13+           TTCCTTTCCTTGAAGAGATCTCGAAGTGATGGCGTTGAAGTTGCCATTTCTGGGCACAAT
                      ____________________________________________________________
consensus             TTCCTTTCCTTGAAGAGATCTCGAAGTGATGGCGTTGAAGTTGCCATTTCTGGGCACAAT
 
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JMFF048H02+           AATCAATCTGGGAACTGG                                          
JMSF050A10+           AATCAATCTGGGAACTGGGAATGAAGCTCTGAGCTCCCTTTCTTCAACTTTAATTAGTTC
JMFF035A13+           AATCAATCTGGGAACTGGGAATGAAGCTCTGAGCTCCCTTTCTTCAACTTTAATTAGTTC
                      ____________________________________________________________
consensus             AATCAATCTGGGAACTGGGAATGAAGCTCTGAGCTCCCTTTCTTCAACTTTAATTAGTTC
 
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JMSF050A10+           ATAAAAAGTACAGACATCGTTAAAGAAACAGTAGCTCCAAGTGT                
JMFF035A13+           ATAAAAAGTACAGACATCGTTAAAGAAACAGTAGCTCCAAGTGTGAATACGTACATGGTA
                      ____________________________________________________________
consensus             ATAAAAAGTACAGACATCGTTAAAGAAACAGTAGCTCCAAGTGTGAATACGTACATGGTA
 
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JMFF035A13+           GAATGATACTCAATTACTGATCGATCAAACGGAATTAAATGTGAAAAGAGTAGGGAGAGA
                      ____________________________________________________________
consensus             GAATGATACTCAATTACTGATCGATCAAACGGAATTAAATGTGAAAAGAGTAGGGAGAGA
 
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JMFF035A13+           GAGAATAAGAGAGAGAGAGTCAAATGCCATTGAAGAACGAATCTGAGAATCTGAAGGGGT
                      ____________________________________________________________
consensus             GAGAATAAGAGAGAGAGAGTCAAATGCCATTGAAGAACGAATCTGAGAATCTGAAGGGGT