Contig 008805:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M20Sequence388008805 (6)730004106 (5)ref|XP_009615190.1|8e-88PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096
JMFF025K03Sequence566008805 (6)760004106 (5)ref|XP_009615190.1|4e-89PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096
JMFF028A05Sequence503008805 (6)687004106 (5)emb|CDP19148.1|2e-70unnamed protein product [Coffea canephora]
JMFF043I05Sequence637008805 (6)633004106 (5)emb|CDP19148.1|4e-49unnamed protein product [Coffea canephora]
JMFS028H01Sequence633008805 (6)ref|XP_006351083.1|4e-25PREDICTED: F-box/ankyrin repeat protein SKIP35-like isoform X3 [Solanum tuberos
JMSF001P14Sequence276008805 (6)678004106 (5)ref|XP_009615190.1|7e-79PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096

Alignment

This contig is upended


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JMFS028H01+                     ATCATGGAAGTCACAGCGTCCTGAAATGACCTCCCTAGCTCAATCCTGTC
                      ____________________________________________________________
consensus                       ATCATGGAAGTCACAGCGTCCTGAAATGACCTCCCTAGCTCAATCCTGTC
 
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JMFS028H01+           CTGTTTACTAAGCTTCTTCTCTTGCCCAGATTTCTCATTTTTACCAGGTTCAGGATCAGA
                      ____________________________________________________________
consensus             CTGTTTACTAAGCTTCTTCTCTTGCCCAGATTTCTCATTTTTACCAGGTTCAGGATCAGA
 
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JMFS028H01+           ATTAGCCTGTCTGAATTTATGTTTCTTAACCCCAGAAATGCAAGGTCCTCCTGGTCCTCT
JMFF043I05+                                                              TGGTCCTCT
                      ____________________________________________________________
consensus             ATTAGCCTGTCTGAATTTATGTTTCTTAACCCCAGAAATGCAAGGTCCTCCTGGTCCTCT
 
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JMFS028H01+           AAAATCTTTCCCCACATGCGGGGTTTGTCCTGAAAAAACCACATTGCCATTGCTTCCCTC
JMFF043I05+           AAAATCTTTCCCCACATGCGGGGTTTGTCCTGAAAAAACCACATTGCCATT-CTTCCCTC
                      ____________________________________________________________
consensus             AAAATCTTTCCCCACATGCGGGGTTTGTCCTGAAAAAACCACATTGCCATTGCTTCCCTC
 
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JMFS028H01+           ACCATTCTCAGAGTCGGAAACAAAATTTTGGCCACTCATACCCGAGATTCCAGTTTCCAC
JMFF025K03+              ATTCTCAGAGTCGGAAACAAAATTTTGGCCACTCATACCCGAGATTCCAGTTTCCAC
JMFF043I05+           ACCATTCTCAGAGTCGGAAACAAAATTTTGGCCACTCATACCCGAGATTCCAGTTTCCAC
                      ____________________________________________________________
consensus             ACCATTCTCAGAGTCGGAAACAAAATTTTGGCCACTCATACCCGAGATTCCAGTTTCCAC
 
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JMFS028H01+           TTCCATTCCACAGCAGTGAGGCTCCCTCATATTATTATCCTCAGCAACCAAATTCAGGTC
JMFF025K03+           TTCCATTCCACAGCAGTGAGGCTCCCTCATATTATTATCCTCAGCAACCAAATTCAGGTC
JMFF043I05+           TTCCATTCCACAGCAGTGAGGCTCCCTCATATTATTATCCTCAGCAACCAAATTCAGGTC
JMFF028A05+                                                TCCTCAGCAACCAAATTCAGGTC
                      ____________________________________________________________
consensus             TTCCATTCCACAGCAGTGAGGCTCCCTCATATTATTATCCTCAGCAACCAAATTCAGGTC
 
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JMFS028H01+           TTGATTCTCCACCAGGTATGTTCCCTTATCTTCTTCCATTTTGTATCGTCCAACCAAGCA
JMFF025K03+           TTGATTCTCCACCAGGTATGTTCCCTTATCTTCTTCCATTTTGTATCGTCCAACCAAGCA
JMFF043I05+           TTGATTCTCCACCAGGTATGTTCCCTTATCTTCTTCCATTTTGTATCGTCCAACCAAGCA
JMFF028A05+           TTGACTCTCCACCAGGTATGTTCCCTTATCTTCTTCCATTTTGTATCGTCCAACCAAGCA
                      ____________________________________________________________
consensus             TTGATTCTCCACCAGGTATGTTCCCTTATCTTCTTCCATTTTGTATCGTCCAACCAAGCA
 
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JMFS028H01+           AGCACCCAAAGCTAGGCAAAGACAAGAAGAATCACTTCTTCCAGATAGCAGCCTTAACCA
JMFF025K03+           AGCACCCAAAGCTAGGCAAAGACAAGAAGAATCACTTCTTCCAGATAGCAGCCTTAACCA
JMFF002M20+            GCACCCAAAGCTAGGCAAAGACAAGAAGAATCACTTCTTCCAGATAGCANCCTTAACCA
JMFF043I05+           AGCACCCAAAGCTAGGCAAAGACAAGAAGAATCACTTCTTCCAGATAGCAGCCTTAACCA
JMFF028A05+           AGCACCCAAAGCTAGGCAAAGACAAGAAGAATCACTTCTTCCAGATAGCAGCCTTAACCA
                      ____________________________________________________________
consensus             AGCACCCAAAGCTAGGCAAAGACAAGAAGAATCACTTCTTCCAGATAGCAGCCTTAACCA
 
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JMFS028H01+           TATTAAAGGAAAAATATAGTCCCCTAAATCCCTTAAGAATCACAACTTTCATACAAACCC
JMFF025K03+           TATTAAAGGAAAAATATAGTCCCCTAAATCCCTTAAGAATCACAACTTTCATACAAACCC
JMFF002M20+           TATTAAAGGAAAAATATAGTCCCCTAAATCCCTTAAGAATCACAACTTTCATACAAACCC
JMSF001P14+                                                                  AACCC
JMFF043I05+           TATTAAAGGAAAAATATAGTCCCCTAAATCCCTTAAGAATCACAACTTTCATACAAACCC
JMFF028A05+           TATTAAAGGAAAAATATAGTCCCCTAAATCCCTTAAGAATCACAACTTTCATACAAACCC
                      ____________________________________________________________
consensus             TATTAAAGGAAAAATATAGTCCCCTAAATCCCTTAAGAATCACAACTTTCATACAAACCC
 
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JMFS028H01+           TTGAAAAGTTAACGGAAATCCACGGAGGATTTGAGATCAAACTGAAGCGTAAAAATGACC
JMFF025K03+           TTGAAAAGTTAACGGAAATCCACGGAGGATTTGAGATCAAACTGAAGCGTAAAAATGACC
JMFF002M20+           TTGAAAAGTTAACGGAAATCCACGGAGGATTTGAGATCAAACTGAAGCGTAAAAATGACC
JMSF001P14+           NTGAAAAGTTAACGGAAATCCACGGAGGATTTGAGATCAAACTGAAGCGTAAAAATGACC
JMFF043I05+           TTGAAAAGTTAACGGAAATCCACGGAGGATTTGAGATCAAACTGAAGCGTAAAAATGACC
JMFF028A05+           TTGAAAAGTTAACGGAAATCCACGGAGGATTTGAGATCAAACTGAAGCGTAAAAATGACC
                      ____________________________________________________________
consensus             TTGAAAAGTTAACGGAAATCCACGGAGGATTTGAGATCAAACTGAAGCGTAAAAATGACC
 
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JMFS028H01+           TGGATTCCTCAAAAAGAAGGGAATTGAAGGATCAAAGAAGAAC                 
JMFF025K03+           TGGATTCCTCAAAAAGAAGGGAATTGAAGGATCAAAGAAGAACAAAAATCCCAGCAGCAA
JMFF002M20+           TGGATTCCTCAAAAAGAAGGGAATTGAAGGATCAAAGAAGAACAAAAATCCCAGCAGCAA
JMSF001P14+           TGGATTCCTCAAAAAGAAGGGAATTGAAGGATCAAAGAAGAACAAAAATCCCAGCAGCAA
JMFF043I05+           TGGATTCCTCAAAAAGAAGGGAATTGAAGGATCAAAGAAGAACAAAAATCCCAGCAGCAA
JMFF028A05+           TGGATTCCTCAAAAAGAAGGGAATTGAAGGATCAAAGAAGAACAAAAATCCCAGCAGCAA
                      ____________________________________________________________
consensus             TGGATTCCTCAAAAAGAAGGGAATTGAAGGATCAAAGAAGAACAAAAATCCCAGCAGCAA
 
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JMFF025K03+           GGGAAAAAGGGCTCAGATGAGAAGCACCACCACCGGAACCACCGGCATCTTCATCATCAG
JMFF002M20+           GGGAAAAAGGGCTCAGATGAGAAGCACCACCACCGGAACCACCGGCATCTTCATCATCAG
JMSF001P14+           GGGAAAAAGGGCTCAGATGAGAAGCACCACCACCGGAACCACCGGCATCTTCATCATCAG
JMFF043I05+           GGGAAAAAGGGCTCAGATGAGAAGCACCACCACCGGAACCACCGGCATCTTCATCATCAG
JMFF028A05+           GGGAAAAAGGGCTCAGATGAGAAGCACCACCACCGGAACCACCGGCATCTTCATCATCAG
                      ____________________________________________________________
consensus             GGGAAAAAGGGCTCAGATGAGAAGCACCACCACCGGAACCACCGGCATCTTCATCATCAG
 
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JMFF025K03+           AACCCTAAGGAAGCCCCTTTCCGACTACCAAACAATCGAATCCACAGTTGAACCTTTCTG
JMFF002M20+           AACCCTAAGGAAGCCCCTTTCCGACTACCAAACAATCGAATCCACAGTTGAACCTTTCTG
JMSF001P14+           AACCCTAAGGAAGCCCCTTTCCGACTACCAAACAATCGAATCCACAGTTGAACCTTTCTG
JMFF043I05+           AACCCTAAGGAAGCCCCTTTCCGACTACCAAACAATCGAATCCACAGTTGAACCTTTCTG
JMFF028A05+           AACCCTAAGGAAGCCCCTTTCCGACTACCAAACAATCGAATCCACAGTTGAAACCGGAAG
                      ____________________________________________________________
consensus             AACCCTAAGGAAGCCCCTTTCCGACTACCAAACAATCGAATCCACAGTTGAACCTTTCTG
 
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JMFF025K03+           ATTCATTGGTGAGAGAGAGAGGCTGT                                  
JMFF002M20+           ANTCATTGGTGAGAGAGAGAGGCTGT                                  
JMSF001P14+           ATTCATTGGTGAGAGAGAGAGGCTGT                                  
JMFF043I05+           ATTCATTGGTGAGAGAGAGAGGCTGT                                  
JMFF028A05+           AAAACCCAACGAAAAATGTAACGAAGTAGAGAAAATAACAGAAAAAGCAGTGCAGAATAT
                      ____________________________________________________________
consensus             ATTCATTGGTGAGAGAGAGAGGCTGTTAGAGAAAATAACAGAAAAAGCAGTGCAGAATAT