Contig 008799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026K06Sequence574008799 (2)emb|CDO97478.1|2e-18unnamed protein product [Coffea canephora]651015931emb|CDO97478.1|3e-21unnamed protein product [Coffea canephora]
JMFS056A01Sequence613008799 (2)gb|AAZ91738.1|7e-53leucine rich repeat protein 1 [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS056A01+ ACTAAATTAGTTA
                      ____________________________________________________________
consensus ACTAAATTAGTTA
 
. : . : . : . : . : . :
JMFS056A01+ AGTTCCCAAGCTCAGTAGGAACTCTTCCACTTATATTAGTGCTATATAGTTCCAAGTACT
                      ____________________________________________________________
consensus AGTTCCCAAGCTCAGTAGGAACTCTTCCACTTATATTAGTGCTATATAGTTCCAAGTACT
 
. : . : . : . : . : . :
JMFS056A01+ GCAAATTTGGAAGCTGACCAAGCTGTGGAACCAGTTGACCCGTCAAATGTGCATTTCCCA
                      ____________________________________________________________
consensus GCAAATTTGGAAGCTGACCAAGCTGTGGAACCAGTTGACCCGTCAAATGTGCATTTCCCA
 
. : . : . : . : . : . :
JMFS056A01+ GATCCACTCTAGTAACACTATTGTCACTGTTGCACGTAACATGAAACCATGTGCAGGGAT
JMFF026K06+ GTAACATGAAACCATGTGCAGGGAT
                      ____________________________________________________________
consensus GATCCACTCTAGTAACACTATTGTCACTGTTGCACGTAACATGAAACCATGTGCAGGGAT
 
. : . : . : . : . : . :
JMFS056A01+ TAACAAGGGTTGGATCCCAACTCTGTAGAACATTGTTAGGATCCGCCAAATTGGTCTTCA
JMFF026K06+ TAACAAGGGTTGGATCCCAACTCTGTAGAACATTGTTAGGATCCGCCAAATTGGTCTTCA
                      ____________________________________________________________
consensus TAACAAGGGTTGGATCCCAACTCTGTAGAACATTGTTAGGATCCGCCAAATTGGTCTTCA
 
. : . : . : . : . : . :
JMFS056A01+ AAGCATTCAATGCATCACCTTCAGAGTTACCAGAGACTAGTGACAATTGAAGAAACGGCA
JMFF026K06+ AAGCATTCAATGCATCACCTTCAGAGTTACCAGAGACTAGTGACAATTGAAGAAACGGCA
                      ____________________________________________________________
consensus AAGCATTCAATGCATCACCTTCAGAGTTACCAGAGACTAGTGACAATTGAAGAAACGGCA
 
. : . : . : . : . : . :
JMFS056A01+ ACAAGAAGCATAGAAGAGCAGCAGAAGCAGAAACCCAGATCACGGGCACCCTCCGATCCA
JMFF026K06+ ACAAGAAGCATAGAAGAGCAGCAGAAGCAGAAACCCAGATCACGGGCACCCTCCGATCCA
                      ____________________________________________________________
consensus ACAAGAAGCATAGAAGAGCAGCAGAAGCAGAAACCCAGATCACGGGCACCCTCCGATCCA
 
. : . : . : . : . : . :
JMFS056A01+ TGATTACCAACTTATTCTTCTTCATCACCACCGCCTAAAAGCTAAGACTTCCCTTCTTCA
JMFF026K06+ TGATTACCAACTTATTCTTCTTCATCACCACCGCCTAAAAGCTAAGACTTCCCTTCTTCA
                      ____________________________________________________________
consensus TGATTACCAACTTATTCTTCTTCATCACCACCGCCTAAAAGCTAAGACTTCCCTTCTTCA
 
. : . : . : . : . : . :
JMFS056A01+ GCATCGTGCAGCTAGCTTTTCAGCTCAAAAGAAAAGAACAAAAAAAGTCAAAGCGCAACC
JMFF026K06+ GCATCGTGCAGCTAGCTTTTCAGCTCAAAAGAAAAGAACAAAAAAAGTCAAAGCGCAACC
                      ____________________________________________________________
consensus GCATCGTGCAGCTAGCTTTTCAGCTCAAAAGAAAAGAACAAAAAAAGTCAAAGCGCAACC
 
. : . : . : . : . : . :
JMFS056A01+ GGAAGCCCTAATTTTGAAGGAGTAAAATCGAGAATCTGAGGAGTAAAACTGAAGCAAAAA
JMFF026K06+ GGAAGCCCTAATTTTGAAGGAGTAAAATCGAGAATCTGAGGAGTAAAACTGAAGCAAAAA
                      ____________________________________________________________
consensus GGAAGCCCTAATTTTGAAGGAGTAAAATCGAGAATCTGAGGAGTAAAACTGAAGCAAAAA
 
. : . : . : . : . : . :
JMFS056A01+ GGGACAAAAGCGGTCTTGGCTCAGCAGCAAAAGAAGAAGAGCTCAGAAATGGAGATTTTG
JMFF026K06+ GGGACAAAAGCGGTCTTGGCTCAGCAGCAAAAGAAGAAGAGCTCAGAAATGGAGATTTTG
                      ____________________________________________________________
consensus GGGACAAAAGCGGTCTTGGCTCAGCAGCAAAAGAAGAAGAGCTCAGAAATGGAGATTTTG
 
. : . : . : . : . : . :
JMFF026K06+ TTAGAAGATGAACTGAACTCCCTTTTTTCTTTCACTTTCCGGGAGAATTGAGGATTCCAA
                      ____________________________________________________________
consensus TTAGAAGATGAACTGAACTCCCTTTTTTCTTTCACTTTCCGGGAGAATTGAGGATTCCAA
 
. : . : . : . : . : . :
JMFF026K06+ AAAGCAGAAAGAGAGAGAAAGAGAGGAGAGGTGATTTTGAAGAAAAATTAAACGGTCTAC
                      ____________________________________________________________
consensus AAAGCAGAAAGAGAGAGAAAGAGAGGAGAGGTGATTTTGAAGAAAAATTAAACGGTCTAC