Contig 008793:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024O11Sequence460008793 (5)emb|CDO98433.1|2e-62unnamed protein product [Coffea canephora]548008793 (5)emb|CDO98433.1|1e-51unnamed protein product [Coffea canephora]
JMFF026K15Sequence588008793 (5)emb|CDO98433.1|2e-61unnamed protein product [Coffea canephora]627008793 (5)emb|CDO98433.1|2e-61unnamed protein product [Coffea canephora]
JMFN030C11Sequence104008793 (5)emb|CDO98433.1|5e-13unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF026K15-                                                    TTTGCTTTGTTAGCATTT
                      ____________________________________________________________
consensus                                                       TTTGCTTTGTTAGCATTT
 
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JMFF026K15+                                CAATGCTCAGTTTCAAATTTCAAATAGAAGCAAAAAGCA
rJMFF024O11-              TTTCTGGCTCTGGTGCACAATGCTCAGTTTCAAATTTCAAATAGAAGCAAAAAGCA
rJMFF026K15-          TGCATTTCTGGCTCTGGTGCACAATGCTCAGTTTCAAATTTCAAATAGAAGCAAAAAGCA
                      ____________________________________________________________
consensus             TGCATTTCTGGCTCTGGTGCACAATGCTCAGTTTCAAATTTCAAATAGAAGCAAAAAGCA
 
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JMFF026K15+           TGAAGAAAACAAGACAATGTCTAAGTATCGGAACTATAATTCTACACGTTAAATGTTTTA
rJMFF024O11-          TGAAGAAAACAAGACAATGTCTAAGTATCGGAACTATAATTCTACACGTTAAATGTTTTA
rJMFF026K15-          TGAAGAAAACAAGACAATGTCTAAGTATCGGAACTATAATTCTACACGTTAAATGTTTTA
                      ____________________________________________________________
consensus             TGAAGAAAACAAGACAATGTCTAAGTATCGGAACTATAATTCTACACGTTAAATGTTTTA
 
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JMFF026K15+           TTACAAAAATGCTTGGGCAGAAAGACAGGCGCATCAGCAAAGTGAACTGACAGTCAATGC
rJMFF024O11-          TTACAAAAATGCTTGGGCAGAAAGACAGGCGCATCAGCAAAGTGAACTGACAGTCAATGC
rJMFF026K15-          TTACAAAAATGCTTGGGCAGAAAGACAGGCGCATCAGCAAAGTGAACTGACAGTCAATGC
                      ____________________________________________________________
consensus             TTACAAAAATGCTTGGGCAGAAAGACAGGCGCATCAGCAAAGTGAACTGACAGTCAATGC
 
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JMFF026K15+           GCTTCTCATTTCTCCCACTTTATACGGAGTATCTTATTAACTCAGAAGACTAGATGACAC
rJMFF024O11-          GCTTCTCATTTCTCCCACTTTATACGGAGTATCTTATTAACTCAGAAGACTAGATGACAC
rJMFF026K15-          GCTTCTCATTTCTCCCACTTTATACGGAGTATCTTATTAACTCAGAAGACTAGATGACAC
JMFF024O11+                               TATACGGAGTATCTTATTAACTCAGAAGACTAGATGACAC
                      ____________________________________________________________
consensus             GCTTCTCATTTCTCCCACTTTATACGGAGTATCTTATTAACTCAGAAGACTAGATGACAC
 
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JMFF026K15+           CAGAAAAAATGGGGAAAAAACAGTCAATTTGTCATTCAATTATTGGACTCCACAGCCTGA
rJMFF024O11-          CAGAAAAAATGGGGAAAAAACAGTCAATTTGTCATTCAATTATTGGACTCCACAGCCTGA
rJMFF026K15-          CAGAAAAAATGGGGAAAAAACAGTCAATTTGTCATTCAATTATTGGACTCCACAGCCTGA
JMFF024O11+           CAGAAAAAATGGGGAAAAAACAGTCAATTTGTCATTCAATTATTGGACTCCACAGCCTGA
                      ____________________________________________________________
consensus             CAGAAAAAATGGGGAAAAAACAGTCAATTTGTCATTCAATTATTGGACTCCACAGCCTGA
 
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JMFF026K15+           ACCTTAGGACCGTGGAGAGAAGGTGGGCGGTGGTCCTTGCCCCAGCCAATGCCGCGGGTG
rJMFF024O11-          ACCTTAGGACCGTGGAGAGAAGGTGGGCGGTGGTCCTTGCCCCAGCCAATGCCGCGGGTG
rJMFF026K15-          ACCTTAGGACCGTGGAGAGAAGGTGGGCGGTGGTCCTTGCCCCAGCCAATGCCGCGGGTG
JMFF024O11+           ACCTTAGGACCGTGGAGAGAAGGTGGGCGGTGGTCCTTGCCCCAGCCAATGCCGCGGGTG
                      ____________________________________________________________
consensus             ACCTTAGGACCGTGGAGAGAAGGTGGGCGGTGGTCCTTGCCCCAGCCAATGCCGCGGGTG
 
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JMFF026K15+           GCGTCGAGATACTGGTGGACAAGGTGGCGGCACTTCTGGAGATGGTTGACGCCCTCGATG
rJMFF024O11-          GCGTCGAGATACTGGTGGACAAGGTGGCGGCACTTCTGGAGATGGTTGACGCCCTCGATG
rJMFF026K15-          GCGTCGAGATACTGGTGGACAAGGTGGCGGCACTTCTGGAGATGGTTGACGCCCTCGATG
JMFF024O11+           GCGTCGAGATACTGGTGGACAAGGTGGCGGCACTTCTGGAGATGGTTGACGCCCTCGATG
                      ____________________________________________________________
consensus             GCGTCGAGATACTGGTGGACAAGGTGGCGGCACTTCTGGAGATGGTTGACGCCCTCGATG
 
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JMFF026K15+           CGGTAGCACCACCGGACCTTCTCGCGGAGGATCTTGGCCTTCTCGATATCTACCCACTTC
rJMFF024O11-          CGGTAGCACCACCGGACCTTCTCGCGGAGGATCTTGGCCTTCTCGATATCTACCCACTTC
rJMFF026K15-          CGGTAGCACCACCGGACCTTCTCGCGGAGGATCTTGGCCTTCTCGATATCTACCCACTTC
JMFF024O11+           CGGTAGCACCACCGGACCTTCTCGCGGAGGATCTTGGCCTTCTCGATATCTACCCACTTC
                      ____________________________________________________________
consensus             CGGTAGCACCACCGGACCTTCTCGCGGAGGATCTTGGCCTTCTCGATATCTACCCACTTC
 
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JMFF026K15+           TCCCGAACCAGGTGCTCCCTCATCTCCAGCATCGCCACCGGGTCCTTGTACGGGTTCTCC
rJMFF024O11-          TCCCGAACCAGGTGCTCCCTCATCTCCAGCATCGCCACCGGGTCCTTGTACGGGTTCTCC
JMFN030C11+           TCCCGAACCAGGTGCTCCCTCATCTCCAGCATCGCCACCGGGTCCTTGTACGTGTTCTCC
rJMFF026K15-          TCCCGAACCAGGTGCTCCCTCATCTCCAGCATCGCCACCGGGTCCTTGTACGGGTTCTCC
JMFF024O11+           TCCCGAACCAGGTGCTCCCTCATCTCCAGCATCGCCACCGGGTCCTTGTACGGGTTCTCC
                      ____________________________________________________________
consensus             TCCCGAACCAGGTGCTCCCTCATCTCCAGCATCGCCACCGGGTCCTTGTACGGGTTCTCC
 
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JMFF026K15+           GAGTCGAAGTCGTCCGGAGCTCCATCGTCGAACACAACTCCCTTCTTCCTCACCAT    
rJMFF024O11-          GAGTCGAAGTCG                                                
JMFN030C11+           GAGTCGAAGTCGTCCGGAGCTCCATCGTCGAACACAACTCCCTT                
rJMFF026K15-          GAGTCGAAGTCGTCCGGAGCTCCATCGTCGAACACAACTCCCTTCTTCCTCACCAT    
JMFF024O11+           GAGTCGAAGTCGTCCGGAGCTCCATCGTCGAACACAACTCCCTTCTTCCTCACCATCTCT
                      ____________________________________________________________
consensus             GAGTCGAAGTCGTCCGGAGCTCCATCGTCGAACACAACTCCCTTCTTCCTCACCATCTCT
 
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JMFF024O11+           CTCTCCGTCCCTCTCTCAGTCTCTCTCTCTCTGTAGCAAAAAACTGTTAGAATGTTAGAT
                      ____________________________________________________________
consensus             CTCTCCGTCCCTCTCTCAGTCTCTCTCTCTCTGTAGCAAAAAACTGTTAGAATGTTAGAT