Contig 008782:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K19Sequence467008782 (8)ref|XP_010531526.1|6e-85PREDICTED: V-type proton ATPase subunit B2 [Tarenaya hassleriana] ref|XP_0105315743002534 (8)gb|AEZ00886.1|2e-95putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis]
JMFF009M17Sequence619008782 (8)ref|XP_010555212.1|356PREDICTED: V-type proton ATPase subunit B2-like [Tarenaya hassleriana] ref|XP_01782002534 (8)gb|AEZ00886.1|6e-80putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis]
JMFF011B11Sequence536008782 (8)gb|KJB39257.1|3e-92hypothetical protein B456_007G004300 [Gossypium raimondii]784002534 (8)gb|AEZ00886.1|3e-93putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis]
JMFF020L14Sequence498008782 (8)gb|KJB39257.1|1e-81hypothetical protein B456_007G004300 [Gossypium raimondii]768002534 (8)gb|AEZ00886.1|2e-94putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis]
JMFF021A13Sequence472008782 (8)ref|XP_010555212.1|261PREDICTED: V-type proton ATPase subunit B2-like [Tarenaya hassleriana] ref|XP_01640002534 (8)ref|XP_008377719.1|6e-69PREDICTED: V-type proton ATPase subunit B 2-like [Malus domestica]
JMFF047G08Sequence428008782 (8)emb|CDP14545.1|6e-74unnamed protein product [Coffea canephora]315002534 (8)ref|XP_008382093.1|4e-19PREDICTED: V-type proton ATPase subunit B2 [Malus domestica] ref|XP_008382094.1|
JMSF026E11Sequence691008782 (8)ref|XP_010531526.1|5e-133PREDICTED: V-type proton ATPase subunit B2 [Tarenaya hassleriana] ref|XP_0105315766002534 (8)gb|AEZ00886.1|3e-95putative nucleotide-binding subunit of vacuolar, partial [Elaeis guineensis]
JMSF039B17Sequence660008782 (8)ref|XP_007036768.1|380ATPase, V1 complex, subunit B protein isoform 3 [Theobroma cacao] ref|XP_0070367854002534 (8)dbj|BAD95251.1|7e-131vacuolar-type H+-ATPase subunit B2 [Arabidopsis thaliana]

Alignment

This contig is upended


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JMSF026E11+ CTCTTCAGCATCACC
                      ____________________________________________________________
consensus CTCTTCAGCATCACC
 
. : . : . : . : . : . :
JMFF009M17+ ATCTGTGC
JMSF026E11+ ANGAAGATTATCAGTCTTCTCCAAACGCTTCACCAAACCAGCCTGACGACATATCTGTGC
JMSF039B17+ CTCCAAACGCTTCACCAAACCAGCCTGACGACATATCTGTGC
                      ____________________________________________________________
consensus ANGAAGATTATCAGTCTTCTCCAAACGCTTCACCAAACCAGCCTGACGACATATCTGTGC
 
. : . : . : . : . : . :
JMFF009M17+ AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
JMSF026E11+ AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
JMSF039B17+ AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
                      ____________________________________________________________
consensus AGCAATTTCATTATGAGGAAGTCCAGCAGCAGAAAATAGAGGAATTTTCTGTCCTCTGGC
 
. : . : . : . : . : . :
JMFF011B11+ GTATCATTTCTTCTGGATAGGT
JMFF009M17+ TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
JMSF026E11+ TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
JMSF039B17+ TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
JMFF005K19+ TAGGT
                      ____________________________________________________________
consensus TATTGAATTCATGACATCAATTGTTGAAATTCCTGTTTGTATCATTTCTTCTGGATAGGT
 
. : . : . : . : . : . :
JMFF011B11+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF020L14+ TTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF009M17+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMSF026E11+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMSF039B17+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF005K19+ TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
JMFF047G08+ GTAGGCCTCAGGTAGAATAGG
JMFF021A13+ TAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTGGAATAGG
                      ____________________________________________________________
consensus TCTCTCACTAGGATTGATAGAACTCCCAGAAATATCCAAGTAGGCCTCAGGTAGAATAGG
 
. : . : . : . : . : . :
JMFF011B11+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF020L14+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF009M17+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMSF026E11+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMSF039B17+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF005K19+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF047G08+ AGGACCATNGTCAATGGGTTCCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
JMFF021A13+ AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
                      ____________________________________________________________
consensus AGGACCATTGTCAATGGGTTTCCCGGAACCATTAAAAATGCGGCCAAGCATATCCAGCGA
 
. : . : . : . : . : . :
JMFF011B11+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF020L14+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF009M17+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMSF026E11+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMSF039B17+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF005K19+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF047G08+ CACAGGAGTTTNTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
JMFF021A13+ CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
                      ____________________________________________________________
consensus CACAGGAGTTTTTAAAACCTCCCCTGTAAACTGAACAGTTGTATATTTGTTGTCAATTCC
 
. : . : . : . : . : . :
JMFF011B11+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF020L14+ AGAAGTTCCTTCAAAGACATGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF009M17+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMSF026E11+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMSF039B17+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF005K19+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF047G08+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
JMFF021A13+ AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
                      ____________________________________________________________
consensus AGAAGTTCCTTCAAAGACCTGAACAACAGCTTTCTCCCCGTCAACTTCCAGAACTTGTCC
 
. : . : . : . : . : . :
JMFF011B11+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF020L14+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF009M17+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMSF026E11+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMSF039B17+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF005K19+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF047G08+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
JMFF021A13+ ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
                      ____________________________________________________________
consensus ACGTCGGGTTGTTCCATCTCCTAAACGGATGTTAACAATCTCCTGGTACTTGGGTCCCTT
 
. : . : . : . : . : . :
JMFF011B11+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF020L14+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF009M17+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMSF026E11+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMSF039B17+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF005K19+ CACTTTGTCCAGGATAACCAACGGCCTAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF047G08+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
JMFF021A13+ CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
                      ____________________________________________________________
consensus CACTTTGTCCAGGATAACCAACGGCCCAGCAACACCAGAGACAGTCCTATATTCCATGCC
 
. : . : . : . : . : . :
JMFF011B11+ AATCTCCAGAGTTCCCTCCTCCATGCCAATAC
JMFF020L14+ AATCTCCAGAGTTCCCTCCTCCATGCCAATAC
JMFF009M17+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMSF026E11+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMSF039B17+ AATCTCCAGAGTTCCCTCCTCCATGTCAATACTGTTATCCGCCACACCCATATTATGAAA
JMFF005K19+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMFF047G08+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
JMFF021A13+ AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
                      ____________________________________________________________
consensus AATCTCCAGAGTTCCCTCCTCCATGCCAATACTGTTATCCGCCACACCCATATTATGAAA
 
. : . : . : . : . : . :
JMFF005K19+ CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAG
JMFF047G08+ CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAAACAC
JMFF021A13+ CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAGACACGAAAATGAGATCCAAT
                      ____________________________________________________________
consensus CTTTTCGTTTGTTCTTCTCTAATGCCAGATCGAGAGCGAGACACGAAAATGAGATCCAAT