Contig 008778:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020A01Sequence487008778 (3)emb|CDP03114.1|1e-13unnamed protein product [Coffea canephora]644011092 (3)emb|CDP03114.1|3e-44unnamed protein product [Coffea canephora]
JMFF029K19Sequence362008778 (3)emb|CDP03114.1|4e-13unnamed protein product [Coffea canephora]711011092 (3)emb|CDP03114.1|1e-38unnamed protein product [Coffea canephora]
JMFF043B07Sequence600008778 (3)emb|CDP03114.1|2e-13unnamed protein product [Coffea canephora]640011092 (3)emb|CDP03114.1|7e-39unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF043B07+ CGCCGGCGCACAATGTTGCAGAGGAGGCGGCGGCGGCCGTCTTTTCCCTCTCCGAACTNT
                      ____________________________________________________________
consensus CGCCGGCGCACAATGTTGCAGAGGAGGCGGCGGCGGCCGTCTTTTCCCTCTCCGAACTNT
 
. : . : . : . : . : . :
JMFF043B07+ TCGCCGTGAAAATCGACGATTTTGGAGTAGACCTAGACGCCGCCGACGACTCCGTCTCCG
JMFF029K19+ CCG
JMFF020A01+ CCG
                      ____________________________________________________________
consensus TCGCCGTGAAAATCGACGATTTTGGAGTAGACCTAGACGCCGCCGACGACTCCGTCTCCG
 
. : . : . : . : . : . :
JMFF043B07+ ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
JMFF029K19+ ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
JMFF020A01+ ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
                      ____________________________________________________________
consensus ACGAAGAAAACAAGCTGGAATCCGTGGACGAGCTGGAGTCGGAGTTGAAGTGTCTCCTCG
 
. : . : . : . : . : . :
JMFF043B07+ TGTAGCTCTCCATCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
JMFF029K19+ TGTAGCTCCCCACCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
JMFF020A01+ TGTAGCTCTCCATCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
                      ____________________________________________________________
consensus TGTAGCTCTCCATCCATTTCTCCAACATGATTGCTCGTCGGAGACTTGTGATTTCCTCTT
 
. : . : . : . : . : . :
JMFF043B07+ CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
JMFF029K19+ CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
JMFF020A01+ CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
                      ____________________________________________________________
consensus CAACTTCAACGCCGCCGCCATTGTTGTTCCTTCTGTACGCCGCGGCGGCGGCGAACGACG
 
. : . : . : . : . : . :
JMFF043B07+ ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
JMFF029K19+ ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
JMFF020A01+ ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
                      ____________________________________________________________
consensus ACGTTTCTTTCTCTTCTACCGACTCGTCAATGGAATGGTAAATGGCTTCCAGGAGGGAGG
 
. : . : . : . : . : . :
JMFF043B07+ AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
JMFF029K19+ AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
JMFF020A01+ AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
                      ____________________________________________________________
consensus AAGAGAAGGACGGAGTTTTCCTCCTCCGCTGACTTCTTTCGTTCCGCCATGGCTTTTCCA
 
. : . : . : . : . : . :
JMFF043B07+ TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAATG
JMFF029K19+ TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAAT
JMFF020A01+ TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAATG
                      ____________________________________________________________
consensus TATCAGAGATAGATTCAGAGTAGAGTTTCAGAAGAAAGTGGACATGGAAAATAAATAATG
 
. : . : . : . : . : . :
JMFF043B07+ ATCAGATACTGTAGTGGAAGGTGGCTATATAGAGAAGTTGGTGGAAAAGCCAAATGGCAC
JMFF020A01+ ATCAGATACTGTAGTGGAAGGTGGCTATATAGAGAAGTTGGTGGAAAAGCCAAATGGCAC
                      ____________________________________________________________
consensus ATCAGATACTGTAGTGGAAGGTGGCTATATAGAGAAGTTGGTGGAAAAGCCAAATGGCAC
 
. : . : . : . : . : . :
JMFF043B07+ GGCTTGGATTTTGGGAGAGAGAGAGAGAGAGAAGGAAACTTCCGCAGGGGAATAGAGTAT
JMFF020A01+ GGCTTGGATTTTGGGAGAGAGAGAGAGAGAGAAGGAAACTTCCGCAGGGGAATAGAGTAT
                      ____________________________________________________________
consensus GGCTTGGATTTTGGGAGAGAGAGAGAGAGAGAAGGAAACTTCCGCAGGGGAATAGAGTAT