Contig 008777:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019O10Sequence506008777 (6)ref|XP_009607918.1|257PREDICTED: uncharacterized protein LOC104102030 [Nicotiana tomentosiformis]735008777 (6)ref|XP_006344688.1|282PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum]
JMFS040A09Sequence628008777 (6)ref|XP_006344688.1|341PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum]
JMSF019E15Sequence552008777 (6)ref|XP_006344688.1|304PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum]
JMSF021G23Sequence685008777 (6)ref|XP_006344688.1|352PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum]738008777 (6)ref|XP_006344688.1|326PREDICTED: uncharacterized protein LOC102583600 [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF019O10- TCTTTATATATATGAG
                      ____________________________________________________________
consensus TCTTTATATATATGAG
 
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rJMFF019O10- TGTGTGCAGTTAGAGACGAAAACACAAAACAAGGCAGTGGGGATAGCAGAAACTTTAGAA
rJMSF021G23- GAGACGAAAACACAAAACAAGGCAGTGGGGATAGCAGAAACTTTAGAA
                      ____________________________________________________________
consensus TGTGTGCAGTTAGAGACGAAAACACAAAACAAGGCAGTGGGGATAGCAGAAACTTTAGAA
 
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rJMFF019O10- ACTACAACTAGACCTGTGAACACACGTTAATATAACAATCCACTATTTTTCTTCCACTTG
rJMSF021G23- ACTACAACTAGACCTGTGAACACACGTTAATATAACAATCCACTATTTTTCTTCCACTTG
                      ____________________________________________________________
consensus ACTACAACTAGACCTGTGAACACACGTTAATATAACAATCCACTATTTTTCTTCCACTTG
 
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rJMFF019O10- CCTTCTTGCTTCCCTGACCCGGGGAGAACTTGAGTTCAATTTTTTTGGCAGCACGTTGTA
rJMSF021G23- CCTTCTTGCTTCCCTGACCCGGGGAGAACTTGAGTTCAA-TTTTTTGGCAGCACGTTGTA
                      ____________________________________________________________
consensus CCTTCTTGCTTCCCTGACCCGGGGAGAACTTGAGTTCAATTTTTTTGGCAGCACGTTGTA
 
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rJMFF019O10- TAGCTGCCTGTTTGTAGCGTTGTCTGCGGTTTCTGCGTTGGCTGACAAACAGAAGTCCTG
rJMSF021G23- TAGCTGCCTGTTTGTAGCGTTGTCTGCGGTTTCTGCGTTGGCTGACAAACAGAAGTCCTG
                      ____________________________________________________________
consensus TAGCTGCCTGTTTGTAGCGTTGTCTGCGGTTTCTGCGTTGGCTGACAAACAGAAGTCCTG
 
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rJMFF019O10- CAGTGAGAACCATTCCACCTATTGCCCAAGACACTCTTTCACTGAAAAGCATGTCCTCCA
rJMSF021G23- CAGTGAGAACCATTCCACCTATTGCCCAAGACACTCTTTCACTGAAAAGCATGTCCTCCA
                      ____________________________________________________________
consensus CAGTGAGAACCATTCCACCTATTGCCCAAGACACTCTTTCACTGAAAAGCATGTCCTCCA
 
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rJMFF019O10- CCCAGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
rJMSF021G23- CCCAGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
JMSF021G23+ AGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
                      ____________________________________________________________
consensus CCCAGTGCTTGAAATCTTCTAGCACACTTGAACTCCGAGCAGTTTGAGCAAACTTGGAGT
 
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rJMFF019O10- GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
rJMSF021G23- GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
JMFS040A09+ TTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
JMSF021G23+ GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
                      ____________________________________________________________
consensus GTTTGGAGTGAGACACTCCCCATGATTTAGCTACGTGATCCATATTAGATTTCCCACCAT
 
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rJMFF019O10- AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
rJMSF021G23- AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
JMFS040A09+ AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
JMSF021G23+ AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
JMSF019E15+ GGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
                      ____________________________________________________________
consensus AACAAGAAACTTCTTCTGGATCGTCATACAAGGATTTGACAGAAAAACCTGCAACGCGGC
 
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rJMFF019O10- AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
rJMSF021G23- AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMFS040A09+ AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMSF021G23+ AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMSF019E15+ AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
JMFF019O10+ CCTACCACAAACAAAGTCATTTACCC
                      ____________________________________________________________
consensus AGAGCTCTGTGCCATTAGAGATCCACTCTGAGGCCCTACCACAAACAAAGTCATTTACCC
 
. : . : . : . : . : . :
rJMFF019O10- CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
rJMSF021G23- CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMFS040A09+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMSF021G23+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMSF019E15+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
JMFF019O10+ CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
                      ____________________________________________________________
consensus CACATGGTGCAAGAACCTGTGTCTTCGCATCCACCGCAAAGTATGCGTTAGAGCAGGCTT
 
. : . : . : . : . : . :
rJMFF019O10- GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
rJMSF021G23- GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMFS040A09+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMSF021G23+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMSF019E15+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
JMFF019O10+ GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
                      ____________________________________________________________
consensus GGTATACTCTATCACAGAGAGATGAACATATAAGAGGAGGTCCGGGTTGGACACCAACGT
 
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rJMFF019O10- GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCT
rJMSF021G23- GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMFS040A09+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMSF021G23+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMSF019E15+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
JMFF019O10+ GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
                      ____________________________________________________________
consensus GTGGATCACAGATGGAGCATTCCAACATTTCCCACAAGTTCAAGCACTCTTGGCTCGCTT
 
. : . : . : . : . : . :
rJMSF021G23- CCCCTGTAGAAGCCAACCTCCTAATGGACAG
JMFS040A09+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
JMSF021G23+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
JMSF019E15+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
JMFF019O10+ CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
                      ____________________________________________________________
consensus CCCCTGTAGAAGCCAACCTCCTAATGGACAGCAATGTAGGATGCGTCTGAGTTACATCAC
 
. : . : . : . : . : . :
JMFS040A09+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
JMSF021G23+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
JMSF019E15+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
JMFF019O10+ AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
                      ____________________________________________________________
consensus AGCAAGTCTTCCCACGAAACACCCTGCAAAGGTTCAAATCTCTTGGCCCTTTGTTCACTT
 
. : . : . : . : . : . :
JMFS040A09+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
JMSF021G23+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
JMSF019E15+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
JMFF019O10+ TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
                      ____________________________________________________________
consensus TCCTCGGAGGTTTCCCTTCGTTGGAAAATCTAGGAAAACGACCACCCGGTGAAATACAAA
 
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JMFS040A09+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
JMSF021G23+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
JMSF019E15+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
JMFF019O10+ CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
                      ____________________________________________________________
consensus CTCCATCTTTACCGGCGGCGAGATTGAAGTAAGCGAGCAGTATCAGTAGCAGAGCATAGT
 
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JMFS040A09+ AGGAATCAAATC
JMSF021G23+ AGGAATCAAATCTCATCCTTGATCCTTC
JMSF019E15+ AGGAATCAAATCTCATCCTTGATCCTTC
JMFF019O10+ AGGAATCAAATCTCATCCTTGATCCTTCAATGCCGTGCGGTGCAGTGCGGGGCATTAAGG
                      ____________________________________________________________
consensus AGGAATCAAATCTCATCCTTGATCCTTCAATGCCGTGCGGTGCAGTGCGGGGCATTAAGG