Contig 008765:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014D12Sequence525008765 (2)823009901 (4)ref|XP_009608003.1|2e-81PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Nicotiana tomentosiformi
JMSF006D13Sequence328008765 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF014D12+ CCTTCTTTGTTTGAGTCGGTCAGCTATGTGCAACGCTAGCTAGGG
                      ____________________________________________________________
consensus CCTTCTTTGTTTGAGTCGGTCAGCTATGTGCAACGCTAGCTAGGG
 
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JMFF014D12+ TCACAATGCGGGATTTACACAATTCATATTCTCGGGTAGTTGCTGCCGATTTCCTCTCAC
                      ____________________________________________________________
consensus TCACAATGCGGGATTTACACAATTCATATTCTCGGGTAGTTGCTGCCGATTTCCTCTCAC
 
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JMFF014D12+ CCAAAAAAGAGAGAGAGAGAGTGAAACCCCAGCCAAGAAATTTCTGAATCTCCCATGAAT
                      ____________________________________________________________
consensus CCAAAAAAGAGAGAGAGAGAGTGAAACCCCAGCCAAGAAATTTCTGAATCTCCCATGAAT
 
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JMFF014D12+ TAGGGCAAAATTTTCATTCATATTTCCTCTATTGGAAGCAAATGGTTTCTATATACAGCT
                      ____________________________________________________________
consensus TAGGGCAAAATTTTCATTCATATTTCCTCTATTGGAAGCAAATGGTTTCTATATACAGCT
 
. : . : . : . : . : . :
JMFF014D12+ ACAACAAAATTGGGCATCATCAATCCTCAAACAAAGGCATACAATACAAAAATTTTCAGC
                      ____________________________________________________________
consensus ACAACAAAATTGGGCATCATCAATCCTCAAACAAAGGCATACAATACAAAAATTTTCAGC
 
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JMFF014D12+ AAAAACCTATATTATCTAGACAGATCATCAGAAGATAAAGTTTCAATCCCATGAATAAAA
                      ____________________________________________________________
consensus AAAAACCTATATTATCTAGACAGATCATCAGAAGATAAAGTTTCAATCCCATGAATAAAA
 
. : . : . : . : . : . :
JMSF006D13+ ACCATCTATCAAATTGACAAAACAAAATCCCAATGACAAT
JMFF014D12+ ATCAAAGCAAGAAATAGCATACCATCTATCAAATTGACAAAACAAAATCCCAATGACAAT
                      ____________________________________________________________
consensus ATCAAAGCAAGAAATAGCATACCATCTATCAAATTGACAAAACAAAATCCCAATGACAAT
 
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JMSF006D13+ ATTTGACATTGATCAAATGCAGAAAAGAAAGCAATATACACCGCGGAAAATTTAAAAGCA
JMFF014D12+ ATTTGACATTGATCAAATGCAGAAAAGAAAGCAATATACACCGCGGAAAATTTAAAAGCA
                      ____________________________________________________________
consensus ATTTGACATTGATCAAATGCAGAAAAGAAAGCAATATACACCGCGGAAAATTTAAAAGCA
 
. : . : . : . : . : . :
JMSF006D13+ AACAAAAATGGTACCCGGATTC
JMFF014D12+ AACAAAAATGGTACCCGGATTCATCAGAACGATGGATTCTGGCCCTATTTGAGGAATAAC
                      ____________________________________________________________
consensus AACAAAAATGGTACCCGGATTCATCAGAACGATGGATTCTGGCCCTATTTGAGGAATAAC