| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003B24 | Sequence | 509 | 008764 (6) | ref|XP_004249516.1| | 5e-62 | PREDICTED: protein GPR107-like [Solanum lycopersicum] | |||||
| JMFF014C10 | Sequence | 565 | 008764 (6) | ref|XP_004249516.1| | 1e-68 | PREDICTED: protein GPR107-like [Solanum lycopersicum] | |||||
| JMFF021P18 | Sequence | 422 | 008764 (6) | ref|XP_004249516.1| | 2e-39 | PREDICTED: protein GPR107-like [Solanum lycopersicum] | |||||
| JMFF027G24 | Sequence | 490 | 008764 (6) | ref|XP_004249516.1| | 4e-58 | PREDICTED: protein GPR107-like [Solanum lycopersicum] | 207 | 015933 | |||
| JMFF049M12 | Sequence | 385 | 008764 (6) | ref|XP_004249516.1| | 3e-30 | PREDICTED: protein GPR107-like [Solanum lycopersicum] | |||||
| JMSF010J04 | Sequence | 296 | 008764 (6) | emb|CDP06670.1| | 7e-14 | unnamed protein product [Coffea canephora] | 101 | 019240 | |||
This contig is upended
. : . : . : . : . : . :
JMFF014C10+ ACCGTCGAGGTTGTAGAGCTCGGTA
____________________________________________________________
consensus ACCGTCGAGGTTGTAGAGCTCGGTA
. : . : . : . : . : . :
JMFF003B24+ CTCCATGGAGACCTTAGATTCCGGCGCGCAGTTCGCGAAGAAGAGAGAGTACTCA
JMFF027G24+ TTCCGGCGCGCAGTTCGCGAAGAAGAGAGAGTACTCA
JMFF014C10+ CGGACCTCCATGGAGACCTTAGATTCCGGCGCGCAGTTCGCGAAGAAGAGAGAGTACTCA
____________________________________________________________
consensus CGGACCTCCATGGAGACCTTAGATTCCGGCGCGCAGTTCGCGAAGAAGAGAGAGTACTCA
. : . : . : . : . : . :
JMFF003B24+ TTGGGAGCCGTGATAGGGTAAGAGCGGTTGAAAGAGGAATTCGGCGGCGGGGATAGGTCA
JMFF027G24+ TTGGGAGCCGTGATAGGGTAAGAGCGGTTGAAAGAGGAATTCGGCGGCGGGGATAGGTCA
JMFF021P18+ GAGGAATTCGGCGGCGGGGATAGGTCA
JMFF014C10+ TTGGGAGCCGTGATAGGGTAAGAGCGGTTGAAAGAGGAATTCGGCGGCGGGGATAGGTCA
____________________________________________________________
consensus TTGGGAGCCGTGATAGGGTAAGAGCGGTTGAAAGAGGAATTCGGCGGCGGGGATAGGTCA
. : . : . : . : . : . :
JMFF003B24+ CGGAAGGTGAAGAGTAGGTTTATATACTTTGAATCGAGCACGCAGAACTGCGGGTTCTGC
JMFF027G24+ CGGAAGGTGAAGAGTAGGTTTATATACTTTGAATCGAGCACGCAGAACTGCGGGTTCTGC
JMFF021P18+ CGGAAGGTGAAGAGTAGGTTTATATACTTTGAATCGAGCACGCAGAACTGCGGGTTCTGC
JMFF049M12+ GAAGAGTAGGTTTATATACTTTGAATCGAGCACGCAGAACTGCGGGTTCTGC
JMFF014C10+ CGGAAGGTGAAGAGTAGGTTTATATACTTTGAATCGAGCACGCAGAACTGCGGGTTCTGC
____________________________________________________________
consensus CGGAAGGTGAAGAGTAGGTTTATATACTTTGAATCGAGCACGCAGAACTGCGGGTTCTGC
. : . : . : . : . : . :
JMFF003B24+ TGGAGCTCCAGCAGGACCTGGATGAGCGACTCCTGCGAGAGGAGGAAGAAGCCGAGGTGA
JMFF027G24+ TGGAGCTCCAGCAGGACCTGGATGAGCGACTCCTGCGAGAGGAGGAAGAAGCCGAGGTGA
JMFF021P18+ TGGAGCTCCAGCAGGACCTGGATGAGCGACTCCTGCGAGAGGAGGAAGAAGCCGAGGTGA
JMFF049M12+ TGGAGCTCCAGCAGGACCTGGATGAGCGACTCCTGCGAGAGGAGGAAGAAGCCGAGGTGA
JMSF010J04+ TCCTGCGAGAGGAGGAAGAAGCCGAGGTGA
JMFF014C10+ TGGAGCTCCAGCAGGACCTGGATGAGCGACTCCTGCGAGAGGAGGAAGAAGCCGAGGTGA
____________________________________________________________
consensus TGGAGCTCCAGCAGGACCTGGATGAGCGACTCCTGCGAGAGGAGGAAGAAGCCGAGGTGA
. : . : . : . : . : . :
JMFF003B24+ GACGGCTCCGGCGCGGCGAGCGTGGAGAACACGGCCACCGACGAGACGGCTATGGAGGCG
JMFF027G24+ GACGGCTCCGGCGCGGCGAGCGTGGAGAACACGGCCACCGACGAGACGGCTATGGAGGCG
JMFF021P18+ GACGGCCCCGGCGCGGCGAGCGTGGAGAACACGGCCACCGACGAGACGGCTATGGAGGCG
JMFF049M12+ GACGGCTCCGGCGCGGCGAGCGTGGAGAACACGGCCACCGACGAGACGGCTATGGAGGCG
JMSF010J04+ GACGGNTCCGGCGCGGCGAGCGTGGAGAACACGGCCACCGACGAGACGGCTATGGAGGCG
JMFF014C10+ GACGGCTCCGGCGCGGCGAGCGTGGAGAACACGGCCACCGACGAGACGGCTATGGAGGCG
____________________________________________________________
consensus GACGGCTCCGGCGCGGCGAGCGTGGAGAACACGGCCACCGACGAGACGGCTATGGAGGCG
. : . : . : . : . : . :
JMFF003B24+ TGACCCGTGTGCGTGAACCCGAACCGCTCGAACAGAATCATCGCCCGGGAATCTGAAGTG
JMFF027G24+ TGACCCGTGTGCGTGAACCCGAACCGCTCGAACAGAATCATCGCCCGGGAATCTGAAGTG
JMFF021P18+ TGACCCGTGTGCGTGAACCCGAACCGCTCGAACAGAATCATCGCCCGGGAATCTGAAGTG
JMFF049M12+ TGACCCGTGTGCGTGAACCCGAACCGCTCGAACAGAATCATCGCCCGGGAATCTGAAGTG
JMSF010J04+ TGACCCGTGTGCGTGAACCCGAACCGCTCGAACAGAATCATCGCCCGGGAATCTGAAGTG
JMFF014C10+ TGACCCGTGTGCGTGAACCCGAACCGCTCGAACAGAATCATCGCCCGGGAATCTGAAGTG
____________________________________________________________
consensus TGACCCGTGTGCGTGAACCCGAACCGCTCGAACAGAATCATCGCCCGGGAATCTGAAGTG
. : . : . : . : . : . :
JMFF003B24+ ATCTTCAGGGTTTTGATCTCGGCGGCGGCGAGGTAGACAATGGAGAGGGAGAGGAGGAGG
JMFF027G24+ ATCTTCAGGGTTTTGATCTCGGCGGCGGCGAGGTAGACAATGGAGAGGGAGAGGAGGAGG
JMFF021P18+ ATCTTCAGGGTTTTGATCTCGGCGGCGGCGAGGTAGACAATGGAGAGGGAGAGGAGGAGG
JMFF049M12+ ATCTTCAGGGTTTTGATCTCGGCGGC-GTGAGGTAGACAATGGAGAGGGAGAGGAGGAGG
JMSF010J04+ ATCTTCAGGGTTTTGATCTCGGCGGCGGCGAGGTAGACAATGGAGAGGGAGAGGAGGAGG
JMFF014C10+ ATCTTCAGGGTTTTGATCTCGGCGGCGGCGAGGTAGACAATGGAGAGGGAGAGGAGGAGG
____________________________________________________________
consensus ATCTTCAGGGTTTTGATCTCGGCGGCGGCGAGGTAGACAATGGAGAGGGAGAGGAGGAGG
. : . : . : . : . : . :
JMFF003B24+ ATCAAGGGTAGTTTCGTCATTCTCGCAGGCGGAGATCGGCGGCGAAGCCTGCAAGCCGAC
JMFF027G24+ ATCAAGGGTAGTTTCGTCATTCTCGCAGGCGGAGATCGGCGGCGAAGCCTGCAAGCCGAC
JMFF021P18+ ATCAAGGGTAGTTTCGTCATTCTCGCAGGCGGAGATCGGCGGCGAAGCCTGCAAGCCGAC
JMFF049M12+ ATCAAGGGTAGTTTCGTCATTCTCGCAGGCGGAGATCGGCGGCGAAGCCTGCAAGCCGAC
JMSF010J04+ ATCAAGGGTAGTTTCGTCATTCTCGCAGGCGGAGATCGGCGGCGAAGCCTGCAAGCCGAC
JMFF014C10+ ATCAAGGGTAGTTTCGTCATTCTCGCAGGCGGAGATCGGCGGCGAAGCCTGCAAGCCGAC
____________________________________________________________
consensus ATCAAGGGTAGTTTCGTCATTCTCGCAGGCGGAGATCGGCGGCGAAGCCTGCAAGCCGAC
. : . : . : . : . : . :
JMFF003B24+ GGCGATGAGGAAAAGAAAAGCAAATGCTGAAA
JMFF027G24+ GGCGATGAGGAAAAGAAAAGCAAATGCTGAAA
JMFF021P18+ GGCGATGAGGAAAAGAAAAGCAAATGCTGAAA
JMFF049M12+ GGCGATGAGGAAAAGAAAAGCAAATGCTGAAA
JMSF010J04+ GGCGATGAGGAAAAGAAAAGCAAAT
JMFF014C10+ GGCGATGAGGAAAAGAAAAGCAAATGCTGAAATGCGTTTGGGAAGCAGAGACGGGGAGAT
____________________________________________________________
consensus GGCGATGAGGAAAAGAAAAGCAAATGCTGAAATGCGTTTGGGAAGCAGAGACGGGGAGAT