Contig 008763:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014B20Sequence573008763 (2)ref|XP_009770304.1|1e-66PREDICTED: double-stranded RNA-binding protein 2-like [Nicotiana sylvestris]599021249ref|XP_009606187.1|2e-16PREDICTED: double-stranded RNA-binding protein 2-like [Nicotiana tomentosiformi
JMFF036M24Sequence553008763 (2)ref|XP_011076987.1|1e-67PREDICTED: double-stranded RNA-binding protein 2-like [Sesamum indicum]673018047

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF036M24+                                   GATCTGAATGTAGTGTATGCCGGCAATGATGCTCCT
                      ____________________________________________________________
consensus                                     GATCTGAATGTAGTGTATGCCGGCAATGATGCTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF036M24+           ACTCTTTGAGAAACCTCTTGCAAGAGATTCTTGTATACTCCTGTCTCATCCAAAATTCTG
                      ____________________________________________________________
consensus             ACTCTTTGAGAAACCTCTTGCAAGAGATTCTTGTATACTCCTGTCTCATCCAAAATTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF036M24+           GCGGCAAGAGAATTGGAAGGTCCACGGTTGGCGAGAGCATTGAGCGCCACCTCAGCTGCG
                      ____________________________________________________________
consensus             GCGGCAAGAGAATTGGAAGGTCCACGGTTGGCGAGAGCATTGAGCGCCACCTCAGCTGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF036M24+           GAGTGCTCAGCCTGGCGAAGCGTGGAGCAGTAATGGGGGCTCTCGAAGGTCTCGCCGTTG
JMFF014B20+                                GTGGAGCAGTAGTTAGGGCTCTCGAACGTCTCGCCGTTG
                      ____________________________________________________________
consensus             GAGTGCTCAGCCTGGCGAAGCGTGGAGCAGTAGTTGGGGCTCTCGAAGGTCTCGCCGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF036M24+           AAGTTCACCGTGGCCTTGAATCGGGGCCCGTGATCCGGGCCTTCTCTGATGCAACTATAC
JMFF014B20+           AAGTTCACGGTCGCCTTGAATCGCGGCGCGTGATCAGGACCTTCTCTGATGCAGGAATAC
                      ____________________________________________________________
consensus             AAGTTCACGGTGGCCTTGAATCGGGGCGCGTGATCCGGGCCTTCTCTGATGCAGGTATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF036M24+           GACGGCAGGTTGAAGCAGCTCCTCTGCGCCAGTTCCTGCAGCTGGTTCTTATACATTTCT
JMFF014B20+           GACGGCAAGTTGAAGCAGCTCCTCTGCGCCAGCTCCTGCAGCTGGTTCTTATACATTTCT
                      ____________________________________________________________
consensus             GACGGCAGGTTGAAGCAGCTCCTCTGCGCCAGTTCCTGCAGCTGGTTCTTATACATTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF036M24+           CC                                                          
JMFF014B20+           CCCTACCACAACCAAACCCTTCCAAACCTTCAAAAGCGAGAAATCAAACGGAAAACAATC
                      ____________________________________________________________
consensus             CCCTACCACAACCAAACCCTTCCAAACCTTCAAAAGCGAGAAATCAAACGGAAAACAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014B20+           AGCTCAGATCATCACGGCCGACACCAGCTCCGATCGGAGGGTTTCTAGACAGAGAAAGTA
                      ____________________________________________________________
consensus             AGCTCAGATCATCACGGCCGACACCAGCTCCGATCGGAGGGTTTCTAGACAGAGAAAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014B20+           ACATCGGAGCAAATGGCCGGCAGAGAGAGAGAGAGATTGGAGCTTCGTAGCAGAGAAGAG
                      ____________________________________________________________
consensus             ACATCGGAGCAAATGGCCGGCAGAGAGAGAGAGAGATTGGAGCTTCGTAGCAGAGAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014B20+           AAAGAGAGAGCGGGTGAGGGATTCTACTCTCTCGGCATCAGAAACAACGAAGGAGAGTGT
                      ____________________________________________________________
consensus             AAAGAGAGAGCGGGTGAGGGATTCTACTCTCTCGGCATCAGAAACAACGAAGGAGAGTGT