Contig 008749:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010A06Sequence222008749 (3)ref|XP_009614667.1|1e-04PREDICTED: defensin-like protein [Nicotiana tomentosiformis]355008749 (3)gb|AAS65426.1|1e-04Kunitz-type trypsin inhibitor [Ipomoea batatas]
JMFF010B06Sequence357008749 (3)gb|AAS65426.1|1e-11Kunitz-type trypsin inhibitor [Ipomoea batatas]

Alignment

This contig is upended


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rJMFF010A06+                                                  GCAAAACATGGCTTCATCTC
rJMFF010B06+                                     CTCATCCTCTGCAGCAAAACATGGCTTCATCTC
                      ____________________________________________________________
consensus                                        CTCATCCTCTGCAGCAAAACATGGCTTCATCTC
 
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rJMFF010A06+          TCCGTTCATTTGCAGCTGCCCTTCTCTTTGTCATGCTGTTCATGGCCACTGAGCTGGGGA
rJMFF010B06+          TCCGTTCATTTGCAGCTGCCCTTCTCTTTGTCATGCTGTTCATGNCCNCTGAGNTGGGGA
                      ____________________________________________________________
consensus             TCCGTTCATTTGCAGCTGCCCTTCTCTTTGTCATGCTGTTCATGGCCACTGAGCTGGGGA
 
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rJMFF010A06+          GAAACACAATATTGGTGGCAGAGGCAGGGAAGTGCGAGGTGCCGAGCGGCAAGTTCAAGG
rJMFF010B06+          GAANCACAATATTGGTGGCAGAGGCAGGGAAGTGCGAGGTGCCGAGCGGCAAGTTCAAGG
                      ____________________________________________________________
consensus             GAAACACAATATTGGTGGCAGAGGCAGGGAAGTGCGAGGTGCCGAGCGGCAAGTTCAAGG
 
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rJMFF010A06+          GGTTATGTGGTCGGA                                             
rJMFF010B06+          GGTTATGTGGTCGGAGCAAAACCTGCAGATCGATTTGCCGGACGGAGGTGTNNNCCGACG
                      ____________________________________________________________
consensus             GGTTATGTGGTCGGAGCAAAACCTGCAGATCGATTTGCCGGACGGAGGTGTNNNCCGACG
 
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rJMFF010B06+          GCCAGTGCAGAGGGATTAGGTTCCGCTGCATGTGCATTAAGAATTGCTAATTCATCGATC
                      ____________________________________________________________
consensus             GCCAGTGCAGAGGGATTAGGTTCCGCTGCATGTGCATTAAGAATTGCTAATTCATCGATC
 
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rJMFF010B06+          TAAGCTACCGATAAATGTTACAAATCCAACGACCCATGGAGCCTTGGCTTCTCTCTGATC
JMFF010A06-                     ATAAATGTTACAAATCCAACGACCCATGGAGCCTTGGCTTCTCTCTGATC
                      ____________________________________________________________
consensus             TAAGCTACCGATAAATGTTACAAATCCAACGACCCATGGAGCCTTGGCTTCTCTCTGATC
 
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rJMFF010B06+          TTCTTGTTAAATTTTAAGCGC                                       
JMFF010A06-           TTCTTGTTAAATTTTAAGCGCCGTTGAAAGTTGGTTTTAATGGTTATATGAAAAAAAAAA
                      ____________________________________________________________
consensus             TTCTTGTTAAATTTTAAGCGCCGTTGAAAGTTGGTTTTAATGGTTATATGAAAAAAAAAA