Contig 008740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007J15Sequence549008740 (4)ref|XP_009800759.1|3e-19PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl
JMFS090G04Sequence617008740 (4)ref|XP_009800759.1|2e-61PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl
JMFS118H09Sequence625008740 (4)ref|XP_009800759.1|1e-30PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl
JMSF038B02Sequence698008740 (4)ref|XP_009800759.1|1e-51PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl813007118 (2)ref|XP_009798332.1|5e-22PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Nicotian

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS090G04+ TAGT
                      ____________________________________________________________
consensus TAGT
 
. : . : . : . : . : . :
JMFS090G04+ ATTGGATTCNCCACACGATTCCTCTGGCTNTGAGATATTTGATCCATTTACTTCAATCTT
                      ____________________________________________________________
consensus ATTGGATTCNCCACACGATTCCTCTGGCTNTGAGATATTTGATCCATTTACTTCAATCTT
 
. : . : . : . : . : . :
JMFS090G04+ AATTTTCAGCTTCATATCATTGGAGACTAGATTATCTAAATTTACCTCAATGTAATTGTT
                      ____________________________________________________________
consensus AATTTTCAGCTTCATATCATTGGAGACTAGATTATCTAAATTTACCTCAATGTAATTGTT
 
. : . : . : . : . : . :
JMFS090G04+ CCCATTTTTAGTTTCATAGTATTCATCCACTTCATCACAGTCTGTAAAATTTTCAGGGAA
JMSF038B02+ TTTCATAGTATTCATCCACTTCATCACAGTCTGTAAAATTTTCAGGGAA
                      ____________________________________________________________
consensus CCCATTTTTAGTTTCATAGTATTCATCCACTTCATCACAGTCTGTAAAATTTTCAGGGAA
 
. : . : . : . : . : . :
JMFS090G04+ AAAACGGTTCCCAGCTTCATCAATCCATGCAATTGGTTGCTGTGAACCTGTCTTCAAGTC
JMSF038B02+ AAAACGGTTCCCAGCTTCATCAATCCATGCAATTGGTTGCTGTGAACCTGTCTTCAAGTC
                      ____________________________________________________________
consensus AAAACGGTTCCCAGCTTCATCAATCCATGCAATTGGTTGCTGTGAACCTGTCTTCAAGTC
 
. : . : . : . : . : . :
JMFS090G04+ CACCAGCATTACAGAGACAAAGTCAAGCACACAAATTCTACCAAAAAAGTCTACCTCTAT
JMSF038B02+ CACCAGCATTACAGAGACAAAGTCAAGCACACAAATTCTACCAAAAAAGTCTACCTCTAT
JMFS118H09+ GAGACAAAGTCAAGCACACAAATTCTACCAAAANAGTCTACCTCTAT
                      ____________________________________________________________
consensus CACCAGCATTACAGAGACAAAGTCAAGCACACAAATTCTACCAAAAAAGTCTACCTCTAT
 
. : . : . : . : . : . :
JMFS090G04+ AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
JMSF038B02+ AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
JMFS118H09+ AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
JMFF007J15+ AGGAAAGTC
                      ____________________________________________________________
consensus AACTGATTTCTCCATCTGCAAATCTTTTCTAACGATTGCAAGAATATCCTCAGGAAAGTC
 
. : . : . : . : . : . :
JMFS090G04+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
JMSF038B02+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
JMFS118H09+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
JMFF007J15+ AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
                      ____________________________________________________________
consensus AGTCCATTCATCATTTTGATAATACATCAAACGTTTTGGAGGTCCACTTCTCTTTAAATT
 
. : . : . : . : . : . :
JMFS090G04+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
JMSF038B02+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
JMFS118H09+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
JMFF007J15+ CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
                      ____________________________________________________________
consensus CAGATAATGTTGAACCATAGGTTTCCTGATGTGAAAACCACATTTGCCTTCGACTCCATT
 
. : . : . : . : . : . :
JMFS090G04+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
JMSF038B02+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
JMFS118H09+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
JMFF007J15+ CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
                      ____________________________________________________________
consensus CAGCTTTCTTCGCTTGCCAAGCTTGTCTGTGCAAGAATTAGGAGGAGAGCTATTTGGTAG
 
. : . : . : . : . : . :
JMFS090G04+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
JMSF038B02+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
JMFS118H09+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
JMFF007J15+ CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
                      ____________________________________________________________
consensus CAATAAGCAGGTAGTTCCATTACTAAATGTCTCATCAGATTGAGCCTCCCATTTTCTTTT
 
. : . : . : . : . : . :
JMFS090G04+ CAAATCAACATCA
JMSF038B02+ CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
JMFS118H09+ CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
JMFF007J15+ CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
                      ____________________________________________________________
consensus CAAATCAACATCATAATGCCTATCCAATTCCCTTCCTAAGTTTACATCCATTTCTTCCTA
 
. : . : . : . : . : . :
JMSF038B02+ GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
JMFS118H09+ GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
JMFF007J15+ GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
                      ____________________________________________________________
consensus GAGAGTGAAACCCTATCAACAACTTCAAATCGAAGATTTCAAAGATAACTCTATACAACA
 
. : . : . : . : . : . :
JMSF038B02+ ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
JMFS118H09+ ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
JMFF007J15+ ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
                      ____________________________________________________________
consensus ACTCAATCTTAGTTTTGCCTCATAGAGACCGTTCCATTTACAAAATCTGCATACCCAGAG
 
. : . : . : . : . : . :
JMSF038B02+ TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGT
JMFS118H09+ TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGTACTTCCCGTCAA
JMFF007J15+ TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGTACTTCCCGTCAA
                      ____________________________________________________________
consensus TTACAGAGATTGAAAAGCCGACAAATTAGTCTTCCTCATCCAAATTGTACTTCCCGTCAA
 
. : . : . : . : . : . :
JMFS118H09+ CAGCGGTGTCAAACCCTAAATCCGCCCGAAGAATTCTC
JMFF007J15+ CAGCGGTGTCAAACCCTAAATCCGCCCGAAGAATTCTCAGCGGGACAAGTGGACAACTAC
                      ____________________________________________________________
consensus CAGCGGTGTCAAACCCTAAATCCGCCCGAAGAATTCTCAGCGGGACAAGTGGACAACTAC