| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004B06 | Sequence | 531 | 008731 (9) | gb|KHG15968.1| | 1e-36 | rRNA 2'-O-methyltransferase fibrillarin 2 -like protein [Gossypium arboreum] | 757 | 008731 (9) | emb|CBI22679.3| | 2e-124 | unnamed protein product [Vitis vinifera] |
| JMFF005N23 | Sequence | 260 | 008731 (9) | 741 | 008731 (9) | emb|CBI22679.3| | 2e-125 | unnamed protein product [Vitis vinifera] | |||
| JMFF045N11 | Sequence | 640 | 008731 (9) | ref|XP_007200358.1| | 1e-75 | hypothetical protein PRUPE_ppa010543mg [Prunus persica] gb|EMJ01557.1| hypotheti | 607 | 008731 (9) | emb|CAN78338.1| | 2e-70 | hypothetical protein VITISV_004622 [Vitis vinifera] |
| JMFN004L01 | Sequence | 264 | 008731 (9) | ||||||||
| JMFN009P11 | Sequence | 119 | 008731 (9) | ||||||||
| JMFN015G10 | Sequence | 611 | 008731 (9) | ref|XP_003634097.1| | 1e-116 | PREDICTED: probable mediator of RNA polymerase II transcription subunit 36b [Vi | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF045N11- GCCTATACTATA
____________________________________________________________
consensus GCCTATACTATA
. : . : . : . : . : . :
rJMFF045N11- CCCTTCAACTGAAAATGATTTAATAATAGTAAGTCCAAAAGAGAATAATTTAATTCTTTG
rJMFF004B06- ATTCTTTG
____________________________________________________________
consensus CCCTTCAACTGAAAATGATTTAATAATAGTAAGTCCAAAAGAGAATAATTTAATTCTTTG
. : . : . : . : . : . :
rJMFF045N11- AAGGTACAAGTGAATGACATGTACTATATGGGCAATTTTTGACCAACTTAACAACATTAA
rJMFF004B06- AAGGTACAAGTGAATGACATGTACTATATGGGCAATTTTTGACCAACTTAACAACATTAA
____________________________________________________________
consensus AAGGTACAAGTGAATGACATGTACTATATGGGCAATTTTTGACCAACTTAACAACATTAA
. : . : . : . : . : . :
rJMFF045N11- ACTGACAAAAGGAAAGAAGAATGAGAATAGTAGCCTAGCTATGAGAATGGCCTACAACCA
rJMFF004B06- ACTGACAAAAGGAAAGAAGAATGAGAATAGTAGCCTAGCTATGAGAATGGCCTACAACCA
____________________________________________________________
consensus ACTGACAAAAGGAAAGAAGAATGAGAATAGTAGCCTAGCTATGAGAATGGCCTACAACCA
. : . : . : . : . : . :
rJMFF045N11- AAACTACAATTGCAATACAACACTGAAATGCAACTCAATCAGGCTCCAAATCTAATAAAG
rJMFF004B06- AAACTACAATTGCAATACAACACTGAAATGCAACTCAATCAGGCTCCAAATCTAATAAAG
____________________________________________________________
consensus AAACTACAATTGCAATACAACACTGAAATGCAACTCAATCAGGCTCCAAATCTAATAAAG
. : . : . : . : . : . :
rJMFF045N11- TTCAAAAGACAACACATCTATGCACTGGGTTTTTGCTTCTTGGGCATCCTGTAACCCCCA
rJMFF004B06- TTCAAAAGACAACACATCTATGCACTGGGTTTTTGCTTCTTGGGCATCCTGTAACCCCCA
JMFN015G10+ TTTTGCTTCTTGGGCATCCTGTAACCCCCA
rJMFF005N23- TTTTGCTTCTTGGGCATCCTGTAACCCCCA
____________________________________________________________
consensus TTCAAAAGACAACACATCTATGCACTGGGTTTTTGCTTCTTGGGCATCCTGTAACCCCCA
. : . : . : . : . : . :
rJMFF045N11- ACAACACAAGCATGGTCTCTCTCAAACGGTTCAAGCGTCACCTGCTCGCTCGGCTTGAAT
rJMFF004B06- ACAACACAAGCATGGTCTCTCTCAAACGGTTCAAGCGTCACCTGCTCGCTCGGCTTGAAT
JMFN015G10+ ACAACACAAGCATGGTCTCGCTCAAATGGTTCAAGAGTCACCTGCTCGCTCGGCTTGAAT
rJMFF005N23- ACAACACAAGCATGGTCTCGCTCAAATGGTTCAAGAGTCACCTGCTCGCTCGGCTTGAAT
____________________________________________________________
consensus ACAACACAAGCATGGTCTCGCTCAAATGGTTCAAGAGTCACCTGCTCGCTCGGCTTGAAT
. : . : . : . : . : . :
rJMFF045N11- TGCTCTGCTTGTAGCTTCTTAACCTCCTGTGCAAATACTGCTTCGGCAGGCACAGTTGAA
rJMFF004B06- TGCTCTGCTTGTAGCTTCTTAACCTCCTGTGCAAATACTGCTTCGGCAGGCACAGTTGAA
JMFN015G10+ TGCTCCGCTTGCAGCTTCTTAACCTCTTGTGCAAATACTGCTTCAGCCGGTACAGTTGAA
rJMFF005N23- TGCTCCGCTTGCAGCTTCTTAACCTCTTGTGCAAATACTGCTTCAGCCGGTACAGTTGAA
____________________________________________________________
consensus TGCTCCGCTTGCAGCTTCTTAACCTCTTGTGCAAATACTGCTTCAGCCGGTACAGTTGAA
. : . : . : . : . : . :
rJMFF045N11- TCGATACAGTTTGCCTTGATGGAAATAACAAAGTGTCCTTCTGATTTCAAGAAGTAGGAG
rJMFF004B06- TCGATACAGTTTGCCTTGATGGAAATAACAAAGTGTCCTTCTGATTTCAAGAAGTAGGAG
JMFN015G10+ TCGATGCAGTTTGCCTTGATGGAAATGACAAAATGACCTTCAGATTTCAAGAAGTAGGAG
rJMFF005N23- TCGATGCAGTTTGCCTTGATGGAAATGACAAAATGACCTTCAGATTTCAAGAAGTAGGAG
____________________________________________________________
consensus TCGATGCAGTTTGCCTTGATGGAAATGACAAAATGACCTTCAGATTTCAAGAAGTAGGAG
. : . : . : . : . : . :
rJMFF045N11- GCATTCAGTGCTAAAATCCTTGCCTGATCAGGTTGAGCAACATCAGAAAATATCACATCA
rJMFF004B06- GCATTCAGTGCTAAAATCCTTGCCTGATCAGGTTGAGCAACATCAGAAAATATCACATCA
JMFN015G10+ GCATTCAGTGCTAAAATCCTTGCCTGATCAGGTTGAGCAACATCAGAAAATATCACATCA
rJMFF005N23- GCATTCAGTGCTAAAATCCTTGCCTGATCAGGTTGAGCAACATCAGAAAATATCACATCA
____________________________________________________________
consensus GCATTCAGTGCTAAAATCCTTGCCTGATCAGGTTGAGCAACATCAGAAAATATCACATCA
. : . : . : . : . : . :
rJMFF045N11- ACCATGCCAACCAACATCCTATATTTTGCAGGGTGTCTGGCATCTTCAATGATGG
rJMFF004B06- ACCATGCCAACCAACATCCTATATTTTGCAGGGTGTCTGGCATCTTCAATGATGGGTATA
JMFN015G10+ ACCATACCAACCAACATCCTGTATTTTGCAGGATGTCTGGCATCTTCAATGATGGGTATA
rJMFF005N23- ACCATACCAACCAACATCCTGTATTTTGCAGGATGTCTGGCATCTTCAATGATGGGTATA
____________________________________________________________
consensus ACCATACCAACCAACATCCTGTATTTTGCAGGATGTCTGGCATCTTCAATGATGGGTATA
. : . : . : . : . : . :
rJMFF004B06- ACATTAGTACGCTTTTTTGCCATGTTAACCAAATCTCTACCACTTCTGTGAGAAAACTCC
JMFN015G10+ ACATTAGTGCGCTTTTTTGCCATGTTAACCAAATCTCTACCACTTCTGTGAGAAAACTCC
rJMFF005N23- ACATTAGTGCGCTTTTTTGCCATGTTAACCAAATCTCTACCACTTCTGTGAGAAAACTCC
JMFF045N11+ TAACCAAATCTCTACCACTTCTGTGAGAAAACTCC
____________________________________________________________
consensus ACATTAGTGCGCTTTTTTGCCATGTTAACCAAATCTCTACCACTTCTGTGAGAAAACTCC
. : . : . : . : . : . :
rJMFF004B06- ACAGCATAGACAACCCCAGTGGGGCCAACAAGGTCAGAAACATGAGAGACTGTTGTCCCT
JMFN015G10+ ACAGCATAGACAACCCCAGTAGGGCCAACAAGGTCAGACACGTGAGAGACTGTTGTTCCG
rJMFF005N23- ACAGCATAGACAACCCCAGTAGGGCCAACAAGGTCAGACACGTGAGAGACTGTTGTTCCG
JMFF045N11+ ACAGCATAGACAACCCCAGTGGGGCCAACAAGGTCAGAAACATGAGAGACTGTTGTCCCT
____________________________________________________________
consensus ACAGCATAGACAACCCCAGTGGGGCCAACAAGGTCAGACACGTGAGAGACTGTTGTTCCT
. : . : . : . : . : . :
rJMFF004B06- GAAGCAGCTCCAAGATAAAGAACTCGCGCACCTGGTTTAATCCAAATTTCATCAACACCT
JMFN015G10+ GAAGCAGCTCCAAGATAGAGTACTCGTGCACCTGGTTTAATCCAAATTTCATC
rJMFF005N23- GAAGCAGCTCCAAGATAGAGTACTCGTGCACCTGGTTTAATCCAAATTTCATCAACACCT
JMFF004B06+ GAAGCAGNTNCAAGATAAAGAANTNGNGCACNTGGTTTAATCNAAATTTNATCAACACCT
JMFF045N11+ GAAGCAGCTCCAAGATAAAGAACTCGCGCACCTGGTTTAATCCAAATTTCATCAACACCT
____________________________________________________________
consensus GAAGCAGCTCCAAGATAAAGAACTCGTGCACCTGGTTTAATCCAAATTTCATCAACACCT
. : . : . : . : . : . :
rJMFF004B06- CCNAGAATAGCAGCTGCCAATTTGGA
rJMFF005N23- CCAAGAATAGCAGCTGCCAACTTGGA
JMFF004B06+ CCAAGAATAGCAGNTGNCAATTTGGAACGGAAAGGATTCCAAACCCTGTACTCAACNTTG
JMFF045N11+ CCAAGAATAGCAGCTGCCAATTTGGAACGGAAAGGATTCCAAACCCTGTACTCAACCTTG
____________________________________________________________
consensus CCAAGAATAGCAGCTGCCAATTTGGAACGGAAAGGATTCCAAACCCTGTACTCAACCTTG
. : . : . : . : . : . :
JMFF004B06+ GTTCCATNTTCATTNTGAACAGCAATTNTNTTNTNGTTGTAGACAGATTCACCAGGGACC
JMFF045N11+ GTTCCATCTTCATTCTGAACAGCAATTCTCTTCTCGTTGTAGACAGATTCACCAGGGACC
____________________________________________________________
consensus GTTCCATCTTCATTCTGAACAGCAATTCTCTTCTCGTTGTAGACAGATTCACCAGGGACC
. : . : . : . : . : . :
JMFF004B06+ ATATTNTTAGTGACAAGAGCATNTTCTTTACCCTTAGCAATGAACACTCCCTCATGCCTA
JMFF045N11+ ATATTCTTAGTGACAAGAGCATCTTCTTTACCCTTAGCAATGAACACTCCCTCATGCCTA
____________________________________________________________
consensus ATATTCTTAGTGACAAGAGCATCTTCTTTACCCTTAGCAATGAACACTCCCTCATGCCTA
. : . : . : . : . : . :
JMFF004B06+ TGAGGCTCCACGACAACCTTACTACCACCCTTCATTCCTCCACGTCCCCTCCCTCCACCT
JMFN009P11+ ACAACCTTACTACCACCCTTCATTCCTCCACGTCCCCTTCCTCCACCT
JMFF045N11+ TGAGGCTCCACGACAACCTTACTACCACCCTTCATTCCTCCACGTCCCCTCCCTCCACCT
____________________________________________________________
consensus TGAGGCTCCACGACAACCTTACTACCACCCTTCATTCCTCCACGTCCCCTCCCTCCACCT
. : . : . : . : . : . :
JMFF004B06+ CTTCCACCACCTCTTCCGCCGCCGCCTCTTCCGCCGCCGCGCTTCATGGCACTCCCACCA
JMFN004L01+ CCGCCGCCTCTTCCCCCGCCGCGCTTCATGTCACTCCCACCA
JMFN009P11+ CTTCCACCACCTCT
JMFF045N11+ CTTCCACCACCTCTTCCGCCGCCGCCTCTTCCGCCGCCGCGCTTCATGGCACTCCCACCA
JMFF005N23+ CCGCCGCCTCTTCCCCCGCCGCGCTTCATGTCACTCCCACCA
____________________________________________________________
consensus CTTCCACCACCTCTTCCGCCGCCGCCTCTTCCGCCGCCGCGCTTCATGTCACTCCCACCA
. : . : . : . : . : . :
JMFF004B06+ CCTCTTCCTCCGCCGGGCCCTCCTCGACCTCCTCTTCCACCTCTCCC
JMFN004L01+ CCTCTTCCCCCGCCGAATCCTCCTCTACCTCCTCTTCCGCCTCTCCC
JMFF045N11+ CCTCTTCCTCCGCCGGGCCCTCCTCGACCTCCTCTTCCACCTCTCCC
JMFF005N23+ CCTCTTCCCCCGCCGAATCCTCCTCTACCTCCTCTTCCGCCTCTCCCTCCATCTCCTCGG
____________________________________________________________
consensus CCTCTTCCTCCGCCGGGTCCTCCTCTACCTCCTCTTCCGCCTCTCCCTCCATCTCCTCGG
. : . : . : . : . : . :
JMFF005N23+ CCACCCCTAAAACCACCACCGCCACCTCCACGACCTCTGGCAACCATAGCTGCTGCTGTG
____________________________________________________________
consensus CCACCCCTAAAACCACCACCGCCACCTCCACGACCTCTGGCAACCATAGCTGCTGCTGTG
. : . : . : . : . : . :
JMFF005N23+ TTAGAAGGATATTTGGCAAAAACTAGGGTTTTGCAAGGGGAGACCGGACACGGTTCACAC
____________________________________________________________
consensus TTAGAAGGATATTTGGCAAAAACTAGGGTTTTGCAAGGGGAGACCGGACACGGTTCACAC