Contig 008729:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005G20Sequence515008729 (3)ref|XP_009592475.1|5e-06PREDICTED: uncharacterized protein LOC104089319 isoform X3 [Nicotiana tomentosi520008729 (3)ref|XP_009592475.1|5e-06PREDICTED: uncharacterized protein LOC104089319 isoform X3 [Nicotiana tomentosi
JMFN010O16Sequence524008729 (3)ref|XP_009592475.1|2e-07PREDICTED: uncharacterized protein LOC104089319 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFN010O16+                                                                    AAG
                      ____________________________________________________________
consensus                                                                      AAG
 
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JMFN010O16+           TCAAGAAGGAATGTCCATACATCTAAAAGCATTTGTCCACAATCATAGCTCAAACTTCAT
rJMFF005G20-                                   AAAGCATTTGTCCACAATCATAGCTCAAACTTCAT
JMFF005G20+                                    AAAGCATTTGTCCACAATCATAGCTCAAACTTCAT
                      ____________________________________________________________
consensus             TCAAGAAGGAATGTCCATACATCTAAAAGCATTTGTCCACAATCATAGCTCAAACTTCAT
 
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JMFN010O16+           CCATAAAATGACAACGATCTGAGAAAGAATGTTAGTCTCTACTTGGAAACATAGTATATG
rJMFF005G20-          CCATAAAATGACAACGATCTGAGAAAGAATGTTAGTCTCTACTTGGAAACATAGTATATG
JMFF005G20+           CCATAAAATGACAACGATCTGAGAAAGAATGTTAGTCTCTACTTGGAAACATAGTATATG
                      ____________________________________________________________
consensus             CCATAAAATGACAACGATCTGAGAAAGAATGTTAGTCTCTACTTGGAAACATAGTATATG
 
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JMFN010O16+           TTGTAGTACTATTATTCTCTGCATCCAAAAGCATAATCCAAAACCAACGGCCAAGGCAAG
rJMFF005G20-          TTGTAGTACTATTATTCTCTGCATCCAAAAGCATAATCCAAAACCAACGGCCAAGGCAAG
JMFF005G20+           TTGTAGTACTATTATTCTCTGCATCCAAAAGCATAATCCAAAACCAACGGCCAAGGCAAG
                      ____________________________________________________________
consensus             TTGTAGTACTATTATTCTCTGCATCCAAAAGCATAATCCAAAACCAACGGCCAAGGCAAG
 
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JMFN010O16+           CCCAAAGCTCTAGCACCTCATTTCCCCACAAGAAAAGTTGCTCAAGTACCGTGAGACAGC
rJMFF005G20-          CCCAAAGCTCTAGCACCTCATTTCCCCACAAGAAAAGTTGCTCAAGTACCGTGAGACAGC
JMFF005G20+           CCCAAAGCTCTAGCACCTCATTTCCCCACAAGAAAAGTTGCTCAAGTACCGTGAGACAGC
                      ____________________________________________________________
consensus             CCCAAAGCTCTAGCACCTCATTTCCCCACAAGAAAAGTTGCTCAAGTACCGTGAGACAGC
 
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JMFN010O16+           TCGCAACAAGCACGGACGTCAACCTTCAAATGCGATGTCAACCGAGATCCTGCCGCCAGC
rJMFF005G20-          TCGCAACGAGCACGGACGTCAACCTTCAAATGCGATGTCAACCGAGATCCTGCCGCCAGC
JMFF005G20+           TCGCAACGAGCACGGACGTCAACCTTCAAATGCGATGTCAACCGAGATCCTGCCGCCAGC
                      ____________________________________________________________
consensus             TCGCAACGAGCACGGACGTCAACCTTCAAATGCGATGTCAACCGAGATCCTGCCGCCAGC
 
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JMFN010O16+           GGCAACAACGACTGCGCGGCCGCTAGTCCTCCCAATGTCCTGGGGTCAGTGAAGGAAAAG
rJMFF005G20-          GGCAACAACGACTGCGCGGCCGCTAGTCCTCCCAATGTCCTGGGGTCAGTGAAGGAAAAG
JMFF005G20+           GGCAACAACGACTGCGCGGCCGCTAGTCCTCCCAATGTCCTGGGGTCAGTGAAGGAAAAG
                      ____________________________________________________________
consensus             GGCAACAACGACTGCGCGGCCGCTAGTCCTCCCAATGTCCTGGGGTCAGTGAAGGAAAAG
 
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JMFN010O16+           CGGCGGGGTTGGGCACGCGAGGCGGTAATTGGTGGCGGACGGAGGCGAGCGAGTGGTGGA
rJMFF005G20-          CGGCGGGGTTGGGCACGCGAGGCGGTAATTGGTGGCGGACGGAGGCGAGCGAGTGGTGGA
JMFF005G20+           CGGCGGGGTTGGGCACGCGAGGCGGTAATTGGTGGCGGACGGAGGCGAGCGAGTGGTGGA
                      ____________________________________________________________
consensus             CGGCGGGGTTGGGCACGCGAGGCGGTAATTGGTGGCGGACGGAGGCGAGCGAGTGGTGGA
 
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JMFN010O16+           GAAGAGCGGGAGGTGGAGGTCCGGACAGTGGAGAGCAGTGATCTGGAAAGCGAGCCACGC
rJMFF005G20-          GAAGAGCGGGAGGTGGAGGTCCGGACAGTGGAGAGCAGTGATCTGGAAAGCGAGCCACGC
JMFF005G20+           GAAGAGCGGGAGGTGGAGGTCCGGACAGTGGAGAGCAGTGATCTGGAAAGCGAGCCACGC
                      ____________________________________________________________
consensus             GAAGAGCGGGAGGTGGAGGTCCGGACAGTGGAGAGCAGTGATCTGGAAAGCGAGCCACGC
 
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JMFN010O16+           CAAGCCATAGCTGTTGCGAAATCAACTCTATACTGTCTTGA                   
rJMFF005G20-          CAAGCCATAGCTGTTGCGAAATCAACTCTATACTGTCTTGATTCCTTCAACACAGTGGGC
JMFF005G20+           CAAGCCATAGCTGTTGCGAAATCAACTCTATACTGTCTTGATTCCTTCAACACAGTGGGC
                      ____________________________________________________________
consensus             CAAGCCATAGCTGTTGCGAAATCAACTCTATACTGTCTTGATTCCTTCAACACAGTGGGC