Contig 008727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005B05Sequence537008727 (4)ref|XP_006357254.1|3e-24PREDICTED: uncharacterized protein At1g27050-like [Solanum tuberosum]709008727 (4)emb|CDP00278.1|1e-60unnamed protein product [Coffea canephora]
JMFF043D01Sequence645008727 (4)emb|CDP00278.1|1e-59unnamed protein product [Coffea canephora]617008727 (4)ref|XP_009796143.1|5e-53PREDICTED: uncharacterized protein At1g27050 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF043D01-                              ACCCTGGCGAGTTTTTTTTTTTTTTTTACCTGAAACATCA
                      ____________________________________________________________
consensus                                 ACCCTGGCGAGTTTTTTTTTTTTTTTTACCTGAAACATCA
 
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rJMFF043D01-          TACATAAACCCATAATTTAATGTCGGAAACCACATAACTATACTGAGACAATCTAACTAT
rJMFF005B05-           ACATAAACCCATAATTTAATGTCGGAAACCACATAACTATACTGAGACAATCTAACTAT
                      ____________________________________________________________
consensus             TACATAAACCCATAATTTAATGTCGGAAACCACATAACTATACTGAGACAATCTAACTAT
 
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rJMFF043D01-          AATCTCGAGAACAGCAAACATAGTTTTACAACAATGGCAAACCCGTACCAGCTAAATCAA
rJMFF005B05-          AATCTCGAGAACAGCAAACATAGTTTTACAACAATGGCAAACCCGTACCAGCTAAATCAA
                      ____________________________________________________________
consensus             AATCTCGAGAACAGCAAACATAGTTTTACAACAATGGCAAACCCGTACCAGCTAAATCAA
 
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rJMFF043D01-          AGAATATCATCGTAAGCAACGATCTCCCTGCCCTTAAAACAGTTAAAAGGCACCCCCAAC
rJMFF005B05-          AGAATATCATCGTAAGCAACGATCTCCCTGCCCTTAAAACAGTTAAAAGGCACCCCCAAC
                      ____________________________________________________________
consensus             AGAATATCATCGTAAGCAACGATCTCCCTGCCCTTAAAACAGTTAAAAGGCACCCCCAAC
 
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rJMFF043D01-          CTAGAAGCAATCCCACCCGGTTTCTGAACACTACTATTTGCATCAACATTATGCTTGTTT
rJMFF005B05-          CTAGAAGCAATCCCACCCGGTTTCTGAACACTACTATTTGCATCAACATTATGCTTGTTT
                      ____________________________________________________________
consensus             CTAGAAGCAATCCCACCCGGTTTCTGAACACTACTATTTGCATCAACATTATGCTTGTTT
 
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rJMFF043D01-          TTGGAGTTCACAATTGCAGATCCCAGCTTGTTACCTCTCCCATGCCTACTGAGAGGCACC
rJMFF005B05-          TTGGAGTTCACAATTGCAGATCCCAGCTTGTTACCTCTCCCATGCCTACTGAGAGGCACC
JMFF043D01+                      AATTGCAGATCCCAGCTNGTTACCTCTCCCATGCCTACTGAGAGGCACC
                      ____________________________________________________________
consensus             TTGGAGTTCACAATTGCAGATCCCAGCTTGTTACCTCTCCCATGCCTACTGAGAGGCACC
 
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rJMFF043D01-          TCTGCTCTAACTAGCTTCGAAGAAACTCCCATCGCTCCTTCGTTCTTAGCCACCCCTTCC
rJMFF005B05-          TCTGCCCTAACTAGCTTCGAAGAAACTCCCATCGCTCCTTCGTTCTTAGCCACCCCTTCC
JMFF043D01+           TCTGCTCTAACTAGCTTCGAAGAAACTCCCATCGCTCCTTCGTTCTTAGCCACCCCTTCC
                      ____________________________________________________________
consensus             TCTGCTCTAACTAGCTTCGAAGAAACTCCCATCGCTCCTTCGTTCTTAGCCACCCCTTCC
 
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rJMFF043D01-          TTCCACTGTGGCACCGGATCACTTGCCCACATTACTTGAACTGGTTCGGAATGTAGGGTA
rJMFF005B05-          TTCCACTGTGGCACCGGATCACTTGCCCACATTACTTGAACTGGTTCGGAATGTAGGGTA
JMFF043D01+           TTCCACTGTGGCACCGGATCACTTGCCCACATTACTTGAACTGGTTCGGAATGTAGGGTA
JMFF005B05+              CACTGTGGCACCGGATCACTTGCCCACATTACTTGAACTGGTTCGGAATGTAGGGTA
                      ____________________________________________________________
consensus             TTCCACTGTGGCACCGGATCACTTGCCCACATTACTTGAACTGGTTCGGAATGTAGGGTA
 
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rJMFF043D01-          ATTGGGAAAGCGGCGTCAGCGGCGGCGGACACGGCGGACACCGCCGA-TTCTCTGGACCG
rJMFF005B05-          ATTGGGAAAGCGGCGTCAGCGGCGGCGGACACGGCGGACACCGCCGA-TTCTCTGGACCG
JMFF043D01+           ATTGGGAAAGCGGCGTCAGCGGCGGCGGACACGGCGGACACCGCCGA-TTCTCTGGACCG
JMFF005B05+           ATTGGGAAAGCGGCGTCAGCGGCGGCGGACACGGCGGACACCGCCGATTTCTCTGGACCG
                      ____________________________________________________________
consensus             ATTGGGAAAGCGGCGTCAGCGGCGGCGGACACGGCGGACACCGCCGA-TTCTCTGGACCG
 
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rJMFF043D01-          GAAGGTGATGTGGGCGAGCCCACCGGGGT-CCATGCGGGTGCGAGAGATTGCGCCGTAAA
rJMFF005B05-          GAAGGTGATGTGGGCGAGCCCACCGGGGT-CCATGCGGGTGCGAGAGATTGCGCCGTAGA
JMFF043D01+           GAAGGTGATGTGGGCGAGCCCACCGGGGT-CCATGCGGGTGCGAGAGATTGCGCCGTAGA
JMFF005B05+           GAAGGTGATGTGGGCGAGCCCACCGGGGTCCCATGCGGGTGCGAGAGATTGCGCCGTAGA
                      ____________________________________________________________
consensus             GAAGGTGATGTGGGCGAGCCCACCGGGGT-CCATGCGGGTGCGAGAGATTGCGCCGTAGA
 
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rJMFF043D01-          TCTCGAACCGAGACTTCAGGTCTAACACCGAACACTCCG                     
rJMFF005B05-          TCTCGAACCGAGACTTCAGGTCTAACACCGAACACTCCGCCGTGAGCCCAATAACGACCA
JMFF043D01+           TCTCGAACCGAGACTTCAGGTCTAACACCGAACACTCCGCCGTGAGCCCAATAACGACCA
JMFF005B05+           TCTCGAACCGAGACTTCAGGTCTAACACCGAACACTCCGCCGTGAGCCCAATAACGACCA
                      ____________________________________________________________
consensus             TCTCGAACCGAGACTTCAGGTCTAACACCGAACACTCCGCCGTGAGCCCAATAACGACCA
 
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rJMFF005B05-          CCGTCGTGGGTAGTTTAGCAGACCCCGTAGAATTTTCCGGCAACAGATCATCATTCGCTG
JMFF043D01+           CCGTCGTGGGTAGTTTAGCAGACCCCGTAGAATTTTCCGGCAACAGATCATCATTCGCTG
JMFF005B05+           CCGTCGTGGGTAGTTTAGCAGACCCCGTAGAATTTTCCGGCAACAGATCATCATTCGCTG
                      ____________________________________________________________
consensus             CCGTCGTGGGTAGTTTAGCAGACCCCGTAGAATTTTCCGGCAACAGATCATCATTCGCTG
 
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rJMFF005B05-          CCACGGCGTTGTCCGCATCGACCGGCGGCGGCAGANGACGGCGGCGCTTA          
JMFF043D01+           CCACGGCGTTGTCCGCATCGACCGGCGGCGGCAGAGGACGGCGGCGCTTAGGGAAAGAGT
JMFF005B05+           CCACGGCGTTGTCCGCATCGACCGGCGGCGGCAGAGGACGGCGGCGCTTAGGGAAAGAGT
                      ____________________________________________________________
consensus             CCACGGCGTTGTCCGCATCGACCGGCGGCGGCAGAGGACGGCGGCGCTTAGGGAAAGAGT
 
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JMFF043D01+           TAGGAACATGGCGAGACTGATACGCTCTGTCTCTCTTCCGACCCATTAATTCTCTTCCCT
JMFF005B05+           TAGGAACATGGCGAGACTGATACGCTCTGTCTCTCTTCCGACCCATTAATTCTCTTCCCT
                      ____________________________________________________________
consensus             TAGGAACATGGCGAGACTGATACGCTCTGTCTCTCTTCCGACCCATTAATTCTCTTCCCT
 
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JMFF043D01+           CCTTTCTTCTGGTAGGTTCGCTATCCAAAATTCTCGTGCGTTTCCGCAGAGCAAAAATTC
JMFF005B05+           CCTTTCTTCTGGTAGGTTCGCTATCCAAAATTCTCGTGCGTTTCCGCAGAGCAAAAATTC
                      ____________________________________________________________
consensus             CCTTTCTTCTGGTAGGTTCGCTATCCAAAATTCTCGTGCGTTTCCGCAGAGCAAAAATTC
 
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JMFF043D01+           GACAAAATTTTGTGAGGTTTCCGGTGAAGAAGTGAGAATTATCGGAAAGTTATGTACT  
JMFF005B05+           GACAAAATTTTGTGAGGTTTCCGGTGAAGAAGTGAGAATTATCGGAAAGTTATGTACTGT
                      ____________________________________________________________
consensus             GACAAAATTTTGTGAGGTTTCCGGTGAAGAAGTGAGAATTATCGGAAAGTTATGTACTGT