Contig 008715:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN029O20-                                                          CACGTCAAATTAT
                      ____________________________________________________________
consensus                                                            CACGTCAAATTAT
 
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JMFN029O20-           ATATCTTCTATTCAAAATCTCACATTTATCTTTATTTTTCATACATTGGCTATTCGTGAA
                      ____________________________________________________________
consensus             ATATCTTCTATTCAAAATCTCACATTTATCTTTATTTTTCATACATTGGCTATTCGTGAA
 
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JMFN029O20-           TTGAGTAACCCTTTCACGGGTTGTCATATATATATATATTTACATTCTTTTTTTTTTAGT
                      ____________________________________________________________
consensus             TTGAGTAACCCTTTCACGGGTTGTCATATATATATATATTTACATTCTTTTTTTTTTAGT
 
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JMFN029O20-           TTTATTTTTTAAAATTTCTTATCAAAGCCTTATCCAATGAATGAAAAATAGAAATGAAGT
rJMFF033E24-                                  AAGCCTTATCCAATGAATGAAAAATAGAAATGAAGT
rJMFF002O17-                                  AAGCCTTATCCAATGAATGAAAAATAGAAATGAAGT
                      ____________________________________________________________
consensus             TTTATTTTTTAAAATTTCTTATCAAAGCCTTATCCAATGAATGAAAAATAGAAATGAAGT
 
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JMFN029O20-           GTCAAACTATGAATCGTTAACACATAATCCGACGTGATATACCCGAAATACATTATTGGA
rJMFF033E24-          GTCAGACTATGAATCGTTAACACATAATCCGACGTGATATACCCGAAATACATTATTGGA
rJMFF002O17-          GTCAGACTATGAATCGTTAACACATAATCCGACGTGATATACCCGAAATACATTATTGGA
                      ____________________________________________________________
consensus             GTCAGACTATGAATCGTTAACACATAATCCGACGTGATATACCCGAAATACATTATTGGA
 
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JMFN029O20-           CAGTATCTGACTGAGTTTTAGGTAAAACTTGCTGAGGAACTGCAAAGCTGACATCCTTCA
rJMFF033E24-          CAGTATCTGACTGAGTTTTAGGTAAGACTTGCTGAGGAACTGCAGAGCTGACATCCTTCA
rJMFF002O17-          CAGTATCTGACTGAGTTTTAGGTAAGACTTGCTGAGGAACTGCAGAGCTGACATCCTTCA
                      ____________________________________________________________
consensus             CAGTATCTGACTGAGTTTTAGGTAAGACTTGCTGAGGAACTGCAGAGCTGACATCCTTCA
 
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JMFN029O20-           AATCTCTTGACTTTCCCCACAACACAACGTACAATCCGATTATAATCACAAATCCACCCA
rJMFF033E24-          AATCTCTTGACTTTCCCCACAACACAACGTACAATCCGATTATAATCACAAATCCACCCA
rJMFF002O17-          AATCTCTTGACTTTCCCCACAACACAACGTACAATCCGATTATAATCACAAATCCACCCA
                      ____________________________________________________________
consensus             AATCTCTTGACTTTCCCCACAACACAACGTACAATCCGATTATAATCACAAATCCACCCA
 
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JMFN029O20-           ACACACTTCCTAAATGCAAAGTTTCACTAAGCAGCAATGAGCTCGCCAGTGCGACGATCA
rJMFF033E24-          ACACACTTCCTAGATGCAAAGTTTCACTAAGCAGCAATGAGCTCGCCAGTGCGACGATCA
rJMFF002O17-          ACACACTTCCTAGATGCAAAGTTTCACTAAGCAGCAATGAGCTCGCCAGTGCGACGATCA
                      ____________________________________________________________
consensus             ACACACTTCCTAGATGCAAAGTTTCACTAAGCAGCAATGAGCTCGCCAGTGCGACGATCA
 
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JMFN029O20-           CCAGTATTAAAGGATTGA                                          
rJMFF033E24-          CCAGTATTAAAGGATTGAAGATGGAGACGAATAAAGGTCCGCTCTTGTTTGCGCACCATG
rJMFF002O17-          CCAGTATTAAAGGATTGAAGATGGAGACGAATAAAGGTCCGCTCTTGTTTGCGCACCATG
                      ____________________________________________________________
consensus             CCAGTATTAAAGGATTGAAGATGGAGACGAATAAAGGTCCGCTCTTGTTTGCGCACCATG
 
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rJMFF033E24-          TCATCAATATCACCACAACTCCCGACCCTAAAACTCCCATAAAAAGAACGACGAATAGTC
rJMFF002O17-          TCATCAATATCACCACAACTCCCGACCCTAAAACTCCCATAAAAAGAACGACGAATAGTC
                      ____________________________________________________________
consensus             TCATCAATATCACCACAACTCCCGACCCTAAAACTCCCATAAAAAGAACGACGAATAGTC
 
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rJMFF033E24-          TTATATTCCAACCGAGCTTCCACTCAGCCTCGTCTCTAGTGACGCATAAAGCGAACACAA
rJMFF002O17-          TTATATTCCAACCGAGCTTCCACTCAGCCTCGTCTCTAGTGACGCATAAAGCGAACACAA
                      ____________________________________________________________
consensus             TTATATTCCAACCGAGCTTCCACTCAGCCTCGTCTCTAGTGACGCATAAAGCGAACACAA
 
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rJMFF033E24-          CAGACTGAATTGCTCCATTGAAACTCATCAATGCAGTGCTTGAATAATGGCATGGATAAT
rJMFF002O17-          CAGACTGAATTGCTCCATTGAAACTCATCAATGCAGTGCTTGAATAATGGCATGGATAAT
                      ____________________________________________________________
consensus             CAGACTGAATTGCTCCATTGAAACTCATCAATGCAGTGCTTGAATAATGGCATGGATAAT
 
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rJMFF033E24-          TCTTGCTTACCCTAGCCAGTAGTACTATCCACACTGCATAGCAAAAGCATGAGATCATAG
rJMFF002O17-          TCTTGCTTACCCTAGCCAGTAGTACTATCCACACTGCATAGCAAAAGCATGAGATCATAG
                      ____________________________________________________________
consensus             TCTTGCTTACCCTAGCCAGTAGTACTATCCACACTGCATAGCAAAAGCATGAGATCATAG
 
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rJMFF033E24-          TGAGGGTTGCACCCAATGCGAAACTACCGGAACTGCCCTCGGCATGTGCAGTTTGGGCGT
rJMFF002O17-          TGAGGGTTGCACCCAATGCGAAACTACCGGAACTGCCCTCGGCATGTGCAGTTTGGGCGT
JMFN028A13+                                                            AGTTTGGGCGT
                      ____________________________________________________________
consensus             TGAGGGTTGCACCCAATGCGAAACTACCGGAACTGCCCTCGGCATGTGCAGTTTGGGCGT
 
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rJMFF033E24-          GGGGATGGGCGAGGTGAAATAAGTCAATCTTTGAACTCCAT                   
rJMFF002O17-          GGGGATGGGCGANGTGAAATAAGTCAATCTTTGAACTCCATATTTGGACCTCCTGCCCTT
JMFN028A13+           GGGGATGGGCGAGGTGAAATAAGTCAATCTTTGAACTCCATATTTGGACCTCCTGCCCTT
JMFS072A05+                              TAAGTCAATCTTTGAACTCCATATTTGGACCTCCTGCCCTT
                      ____________________________________________________________
consensus             GGGGATGGGCGAGGTGAAATAAGTCAATCTTTGAACTCCATATTTGGACCTCCTGCCCTT
 
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rJMFF002O17-          TGTACAACGTCAGAAGCATAGCTCCACTTATGCATACAATTGNTCCCATCACCTTTTGCC
JMFN028A13+           TGTACAACGTCAGAAGCATAGCTCCACTTATGCATACAATTGTTCCCATCACC-TTTGCC
JMFS072A05+           TGTACAACGTCAGAAGCATAGCTCCACTTATGCATACAATTGTTCCCATCACC-TTTGCC
                      ____________________________________________________________
consensus             TGTACAACGTCAGAAGCATAGCTCCACTTATGCATACAATTGTTCCCATCACC-TTTGCC
 
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rJMFF002O17-          TTNCCACTTGCTTTATGAAGCTTCA                                   
JMFN028A13+           TTCCCACTTGCTTTATGAAGCTTCATATTCTCCATTCTGAGAAGAACTGCAACAACAAAG
JMFS072A05+           TTCCCACTTGCTTTATGAAGCTTCATATTCTCCATTCTGAGAAGAACTGCAACAACAAAG
JMFF033E24+                                                              ACAACAAAG
JMFF002O17+                                                TGAGAAGANCTGCAACAACAAAG
                      ____________________________________________________________
consensus             TTCCCACTTGCTTTATGAAGCTTCATATTCTCCATTCTGAGAAGAACTGCAACAACAAAG
 
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JMFN028A13+           GTCATTGCCGGGATAAGATTGTAAATTGCAGTGGCAAATGTTGCAGATGTTAACACCACA
JMFS072A05+           GTCATTGCCGGGATAAGATTGTAAATTGCAGTGGCAAATGTTGCAGATGTTAACACCACA
JMFF033E24+           GTCATTGCCGGGATAAGATTGTAAATTGCAGTGGCAAATGTTGCAGATGTTAACACCACA
JMFF002O17+           GTCATTGCCGGGATAAGATTGTAAATTGCAGTGGCAAATGTTGCAGATGTTAACACCACA
                      ____________________________________________________________
consensus             GTCATTGCCGGGATAAGATTGTAAATTGCAGTGGCAAATGTTGCAGATGTTAACACCACA
 
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JMFN028A13+           CCTTTGAAGAACATGTTTGAGAATAGAGATCCCCCTAATAGAGCAGAAAGAAATGATTGA
JMFS072A05+           CCTTTGAAGAACATGTTTGAGAATAGAGATCCCCCTAATAGAGCAGAAAGAAATGATTGA
JMFF033E24+           CCTTTGAAGAACATGTTTGAGAATAGAGATCCCCCTAATAGAGCAGAAAGAAATGATTGA
JMFF002O17+           CCTTTGAAGAACATGTTTGAGAATAGAGATCCCCCTAATAGAGCAGAAAGAAATGATTGA
                      ____________________________________________________________
consensus             CCTTTGAAGAACATGTTTGAGAATAGAGATCCCCCTAATAGAGCAGAAAGAAATGATTGA
 
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JMFN028A13+           AGTAAGACTCCCCACGTCAACTTTGGCCTCTTATTCCATTCAACAACGATGGCAATGGGG
JMFS072A05+           AGTAAGACTCCCCACGTCAACTTTGGCCTCTTATTCCATTCAACAACGATGGCAATGGGG
JMFF033E24+           AGTAAGACTCCCCACGTCAACTTTGGCCTCTTATTCCATTCAACAACGATGGCAATGGGG
JMFF002O17+           AGTAAGACTCCCCACGTCAACTTTGGCCTCTTATTCCATTCAACAACGATGGCAATGGGG
                      ____________________________________________________________
consensus             AGTAAGACTCCCCACGTCAACTTTGGCCTCTTATTCCATTCAACAACGATGGCAATGGGG
 
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JMFN028A13+           CTGAGGAAGGCGGTGGCGAAGATCCACCGGTAAGCCACCATAATGCTCACCGGCATGCCG
JMFS072A05+           CTGAGGAAGGCGGTGGCGAAGATCCACCGGTAAGCCACCATAATGCTCACCGGCATGCCG
JMFF033E24+           CTGAGGAAGGCGGTGGCGAAGATCCACCGGTAAGCCACCATAATGCTCACCGGCATGCCG
JMFF002O17+           CTGAGGAAGGCGGTGGCGAAGATCCACCGGTAAGCCACCATAATGCTCACCGGCATGCCG
                      ____________________________________________________________
consensus             CTGAGGAAGGCGGTGGCGAAGATCCACCGGTAAGCCACCATAATGCTCACCGGCATGCCG
 
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JMFN028A13+           TCGTTGGCCGCCACCTTAGACAGCACGATGTTCCCTCCCAGGAATGTGGCGGCCACCACC
JMFS072A05+           TCGTTGGCCGCCACCTTAGACAGCACGATGTTCCCTCCCAGGAATGTGGCGGCCACCACC
JMFF033E24+           TCGTTGGCCGCCACCTTAGACAGCACGATGTTCCCTCCCAGGAATGTGGCGGCCACCACC
JMFF002O17+           TCGTTGGCCGCCACCTTAGACAGCACGATGTTCCCTCCCAGGAATGTGGCGGCCACCACC
                      ____________________________________________________________
consensus             TCGTTGGCCGCCACCTTAGACAGCACGATGTTCCCTCCCAGGAATGTGGCGGCCACCACC
 
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JMFN028A13+           AT-GGCTCCCACCTGCTGCACCTTCTCCACGCTCTTCATTTCTTTCCCCCCAACACCCAT
JMFS072A05+           AT-GGCTCCCACCTGCTGCACCTTCTCCACGCTCTTCATTTCTTTCCCCCCAACACCCAT
JMFF033E24+           AT-GGNTCCCACCTGCTGCACCTTCTCCACGCTCTTCATTTCTTTCCCCCCAACACCCAT
JMFF002O17+           ATGGGCTCCCACCTGCTGCACCTTCTCCACGCTCTTCATTTCTTTCCCCCCAACACCCAT
                      ____________________________________________________________
consensus             AT-GGCTCCCACCTGCTGCACCTTCTCCACGCTCTTCATTTCTTTCCCCCCAACACCCAT
 
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JMFN028A13+           CTTTCGATCTTCAATTCAAAGGATTTAATTTGAAGATTTCAAGAAAGCAGCAAACTAAAG
JMFS072A05+           CTTTCGATCTTCAATTCAAAGGATTTAATTTGAAGATTTCAAGAAAGCAGCAAACTAAAG
JMFF033E24+           CTTTCGATCTTCAATTCAAAGGATTTAATTTGAAGATTTCAAGAAAGCAGCAAACTAAAG
JMFF002O17+           CTTTCGATCTTCAATTCAAAGGATTTAATTTGAAGATTTCAAGAAAGCAGCAAACTAAAG
                      ____________________________________________________________
consensus             CTTTCGATCTTCAATTCAAAGGATTTAATTTGAAGATTTCAAGAAAGCAGCAAACTAAAG
 
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JMFN028A13+           AGATATA                                                     
JMFS072A05+           AGATATATTGGAGAGAGATGTAGTTTGTGTGAATGTATGTATAGTTTG            
JMFF033E24+           AGATATATTCGAGAGAGATGTAGTTTGTGTGAATGTATGTATAGTTTGGAATGAAGTGGT
JMFF002O17+           AGATATATTGGAGAGAGATGTAGTTTGTGTGAATGTATGTATAGTTTGGAATGAAGTGGT
                      ____________________________________________________________
consensus             AGATATATTGGAGAGAGATGTAGTTTGTGTGAATGTATGTATAGTTTGGAATGAAGTGGT