Contig 008713:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002J06Sequence568008713 (2)emb|CDP00005.1|2e-38unnamed protein product [Coffea canephora]
JMSF018J16Sequence516008713 (2)emb|CDP00005.1|6e-43unnamed protein product [Coffea canephora]791015014dbj|BAH09867.1|2e-85peroxin 12 [Nicotiana tabacum]

Alignment

This contig is upended


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JMSF018J16+                         TCAACCCATACAATGACTCCGCAAATGATGCATCAGAGGTCCGCAA
JMFF002J06+                                           CCGCAAATGATGCATCAGAGGTCCGCAA
                      ____________________________________________________________
consensus                           TCAACCCATACAATGACTCCGCAAATGATGCATCAGAGGTCCGCAA
 
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JMSF018J16+           ACTGTGTGTTTCAAGAACAAGCATAAGCAAAGCAAAGAATTCATCCTCAAAATCGAGAAT
JMFF002J06+           ACTGTGTGTTTCAAGAACAAGCATAAGCAAAGCAAAGAATTCATCCTCAAAATCGAGAAT
                      ____________________________________________________________
consensus             ACTGTGTGTTTCAAGAACAAGCATAAGCAAAGCAAAGAATTCATCCTCAAAATCGAGAAT
 
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JMSF018J16+           TTTGTGGAGGAAGGATCTTCTCATAGCCAAAACGCCGAGAGAGTAACTGAGTGCAGCTCG
JMFF002J06+           TTTGTGGAGGAAGGATCTTCTCATAGCCAAAACGCCGAGAGAGTAACTGAGTGCAGCTCG
                      ____________________________________________________________
consensus             TTTGTGGAGGAAGGATCTTCTCATAGCCAAAACGCCGAGAGAGTAACTGAGTGCAGCTCG
 
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JMSF018J16+           TAGACTAGAAGGGAGCTGCTGAGCAGCAGCCATCTCGAAGAAGGTGGGACGAGTCCCTTG
JMFF002J06+           TAGACTAGAAGGGAGCTGCTGAGCAGCAGCCATCTCGAAGAAGGTGGGACGAGTCCCTTG
                      ____________________________________________________________
consensus             TAGACTAGAAGGGAGCTGCTGAGCAGCAGCCATCTCGAAGAAGGTGGGACGAGTCCCTTG
 
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JMSF018J16+           CCCACCCACCTGAAACAACATCCTTCTTCACCCTTGGTTAACGAACTCTTGGGTTTCAGT
JMFF002J06+           CCCACCCACCTGAAACAACATCCTTCTTCACCCTTGGTTAACGAACTCTCGGGTTTCAGT
                      ____________________________________________________________
consensus             CCCACCCACCTGAAACAACATCCTTCTTCACCCTTGGTTAACGAACTCTTGGGTTTCAGT
 
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JMSF018J16+           GATGGGTATAGATTGAATGAGCACTACCGTGGTCAAGCAGCTCTGAATGCTTATCTTGCT
JMFF002J06+           GATGGGTATAGATTGAATGAGCACTACCGTGGTCAAGCAGCTCTGAATGCTTATCTTGCT
                      ____________________________________________________________
consensus             GATGGGTATAGATTGAATGAGCACTACCGTGGTCAAGCAGCTCTGAATGCTTATCTTGCT
 
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JMSF018J16+           TCAGACGTTGAGGGGCGTGAGTCGTCGCCGGCGTCCCTGCTGGCGCTGGCTGGAGTCTGC
JMFF002J06+           TCAGACGTTGAGGGGCGTGAGTCGTCGCCGGCGTCCCTGCTGGCGCTGGCTGGAGTCTGC
                      ____________________________________________________________
consensus             TCAGACGTTGAGGGGCGTGAGTCGTCGCCGGCGTCCCTGCTGGCGCTGGCTGGAGTCTGC
 
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JMSF018J16+           TACGTCGCTGCAGGTACTGGGCCGCCGGATGGCTACTGCGTGAGTGAGTGAAGGGGACAA
JMFF002J06+           TACGTCGCTGCAGGTACTGGGCCGCCGGATGGCTACTGCGTGAGTGAGTGAAGGGGACAA
                      ____________________________________________________________
consensus             TACGTCGCTGCAGGTACTGGGCCGCCGGATGGCTACTGCGTGAGTGAGTGAAGGGGACAA
 
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JMSF018J16+           AGGGCGAAGTGGCGAAGGTGTAGGGTGGGGAGGGGATTGTGGCAATGGC           
JMFF002J06+           AGGGCGAAGTGGCGAAGGTGTAGGGTGGGGAGGGGATTGTGGCAATGGCGATAAAGGAAC
                      ____________________________________________________________
consensus             AGGGCGAAGTGGCGAAGGTGTAGGGTGGGGAGGGGATTGTGGCAATGGCGATAAAGGAAC
 
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JMFF002J06+           TGAGCGATAGGGATTTTGGACGATTTTACTGATAAAAGCACCAAACTCCGTTTGCCCCAC
                      ____________________________________________________________
consensus             TGAGCGATAGGGATTTTGGACGATTTTACTGATAAAAGCACCAAACTCCGTTTGCCCCAC