| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF030I20 | Sequence | 651 | 003731 (6) | ref|XP_009778930.1| | 6e-73 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana sylvestris] | 720 | 008689 (3) | pir||S31196 | 1e-90 | hypothetical protein - potato |
| JMSF034C05 | Sequence | 700 | 003731 (6) | ref|XP_009778930.1| | 2e-105 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana sylvestris] | 711 | 008689 (3) | pir||S31196 | 5e-47 | hypothetical protein - potato |
| JMSF052O01 | Sequence | 698 | 003731 (6) | ref|XP_009778930.1| | 1e-105 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana sylvestris] | 868 | 008689 (3) | pir||S31196 | 2e-79 | hypothetical protein - potato |
This contig is upended
. : . : . : . : . : . :
rJMSF030I20+ TTTTCTGATCAATGCGTATCCCTATTTTGCGTACAAGGCGAATCCGAAGCAAGTGT
rJMSF052O01+ TCCGAAGCAAGTGT
____________________________________________________________
consensus TTTTCTGATCAATGCGTATCCCTATTTTGCGTACAAGGCGAATCCGAAGCAAGTGT
. : . : . : . : . : . :
rJMSF030I20+ CGCTGGATTTCGTGCTGTTCCAGCCAAATCCAGGGATTGTTGATCCCGTCTCCAATCTTC
rJMSF052O01+ CGCTGGATTTCGTGCTGTTCCAGCCAAATCCAGGGATTGTTGATCCCGTCTCCAATCTTC
____________________________________________________________
consensus CGCTGGATTTCGTGCTGTTCCAGCCAAATCCAGGGATTGTTGATCCCGTCTCCAATCTTC
. : . : . : . : . : . :
rJMSF030I20+ ACTATGATAATATGTTGTTTGCTCAGATGGATGCGGTTCACTCTGCTTTAGATTCGCTAG
rJMSF052O01+ ACTATGATAATATGTTGTTTGCTCAGATGGATGCGGTTCACTCTGCTTTAGATTCGCTAG
____________________________________________________________
consensus ACTATGATAATATGTTGTTTGCTCAGATGGATGCGGTTCACTCTGCTTTAGATTCGCTAG
. : . : . : . : . : . :
rJMSF030I20+ GGTATAAGAATGTGTGCGTGCAGATCTCGGAGACGGGATGGCCGTCTAAGGGCGACGCCG
rJMSF034C05+ GTGTGCGTGCAGATCTCGGAGACGGGATGGCCGTCTAAGGGCGACGCCG
rJMSF052O01+ GGTATAAGAATGTGTGCGTGCAGATCTCGGAGACGGGATGGCCGTCTAAGGGCGACGCCG
____________________________________________________________
consensus GGTATAAGAATGTGTGCGTGCAGATCTCGGAGACGGGATGGCCGTCTAAGGGCGACGCCG
. : . : . : . : . : . :
rJMSF030I20+ ACGAGGCCGGAGCGACGGAGGACAACGCCAGGAAGTACAACTGCAACCTCATGAAGCTCA
rJMSF034C05+ ACGAGGCCGGAGCGACGGAGGACAACGCCAGGAAGTACAACTGCAACCTCATGAAGCTCA
rJMSF052O01+ ACGAGGCCGGAGCGACGGAGGACAACGCCAGGAAGTACAACTGCAACCTCATGAAGCTCA
____________________________________________________________
consensus ACGAGGCCGGAGCGACGGAGGACAACGCCAGGAAGTACAACTGCAACCTCATGAAGCTCA
. : . : . : . : . : . :
rJMSF030I20+ TGACTTCTAAGAAGGGAACTCCGATGAGGCCGACTAACGATTTGAACATCTACGTCTTTG
rJMSF034C05+ TGACTTCTAAGAAGGGAACTCCGATGAGGCCGACTAACGATTTGAACATCTACGTCTTTG
rJMSF052O01+ TGACTTCTAAGAAGGGAACTCCGATGAGGCCGACTAACGATTTGAACATCTACGTCTTTG
____________________________________________________________
consensus TGACTTCTAAGAAGGGAACTCCGATGAGGCCGACTAACGATTTGAACATCTACGTCTTTG
. : . : . : . : . : . :
rJMSF030I20+ CAATGTTCAACGAGAACATGAAGCCCGGCCCGACCTCGGAGCGCAACTACGGGCTCTTCA
rJMSF034C05+ CAATGTTCAACGAGAACATGAAGCCCGGCCCGACCTCGGAGCGCAACTACGGGCTCTTCA
rJMSF052O01+ CAATGTTCAACGAGAACATGAAGCCCGGCCCGACCTCGGAGCGCAACTACGGGCTCTTCA
____________________________________________________________
consensus CAATGTTCAACGAGAACATGAAGCCCGGCCCGACCTCGGAGCGCAACTACGGGCTCTTCA
. : . : . : . : . : . :
rJMSF030I20+ AGCCCGACGGAACCCCAGCCTATCCTCTCGGAATCAACCTCAGTACAAACATTAGTTCAG
rJMSF034C05+ AGCCCGACGGAACCCCAGCCTATCCTCTCGGAATCAACCTCAGTACAAACATTAGTTCAG
rJMSF052O01+ AGCCCGACGGAACCCCAGCCTATCCTCTCGGAATCAACCTCAGTACAAACATTAGTTCAG
____________________________________________________________
consensus AGCCCGACGGAACCCCAGCCTATCCTCTCGGAATCAACCTCAGTACAAACATTAGTTCAG
. : . : . : . : . : . :
rJMSF030I20+ GCGGTTCCGGAACAAACTCCGGAGGATCTACGCCGTCAACGTCGTCCTCTCCACCGGGAA
rJMSF034C05+ GCGGTTCCGGAACAAACTCCGGAGGATCTACGCCGTCAACGTCGTCCTCTCCACCGGGAA
rJMSF052O01+ GCGGTTCCGGAACAAACTCCGGAGGATCTACGCCGTCAACGTCGTCCTCTCCACCGGGAA
____________________________________________________________
consensus GCGGTTCCGGAACAAACTCCGGAGGATCTACGCCGTCAACGTCGTCCTCTCCACCGGGAA
. : . : . : . : . : . :
rJMSF030I20+ CTTCTTCCACAGGCTATCTGTCCATTTCTTCGGATTCGG
rJMSF034C05+ CTTCTTCCACAGGCTATCTGTCCATTTCTTCGGATTCGGCGAGACAAATGCTGTGCAAGT
rJMSF052O01+ CTTCTTCCACAGGCTATCTGTCCATTTCTTCGGATTCGGCGAGACAAATGCTGTGCAAGT
____________________________________________________________
consensus CTTCTTCCACAGGCTATCTGTCCATTTCTTCGGATTCGGCGAGACAAATGCTGTGCAAGT
. : . : . : . : . : . :
rJMSF034C05+ GCAGAAGAGTAGAGATGTTTTTGCAGATTGCAGTATCCATTATGTTGCTCACCCAATTAT
rJMSF052O01+ GCAGAAGAGTAGAGATGTTTTTGCAGATTGCAGTATCCATTATGTTGCTCACCCAATTAT
____________________________________________________________
consensus GCAGAAGAGTAGAGATGTTTTTGCAGATTGCAGTATCCATTATGTTGCTCACCCAATTAT
. : . : . : . : . : . :
rJMSF034C05+ TGAACAGAGTTTAGAATTTTTTGTGTTCAGAAATCAGAAGACAAGGAAGAAGGGGGAGGA
rJMSF052O01+ TGAACAGAGTTTAGAATTTTTTGTGTTCAGAAATCAGAAGACAAGGAAGAAGGGGGAGGA
____________________________________________________________
consensus TGAACAGAGTTTAGAATTTTTTGTGTTCAGAAATCAGAAGACAAGGAAGAAGGGGGAGGA
. : . : . : . : . : . :
rJMSF034C05+ GAGGAATAATGTGATTCCTGCACTTTTACGGGACTACTTTACTTTTGGAATCAATTCTCA
rJMSF052O01+ GAGGAATAATGTGATTCCTGCACTTTTACGGGACTACTTTACTTTTGGAATCAATTCTCA
____________________________________________________________
consensus GAGGAATAATGTGATTCCTGCACTTTTACGGGACTACTTTACTTTTGGAATCAATTCTCA
. : . : . : . : . : . :
rJMSF034C05+ ACAGCGGGAGGATTATTCTTTTGTTATTACTATTATTATTAGAAAGGAGTATCATTATTT
rJMSF052O01+ ACAGCGGGAGGATTATTCTTTTGTTATTACTATTATTATTAGAAAGGAGTATCATTATTT
____________________________________________________________
consensus ACAGCGGGAGGATTATTCTTTTGTTATTACTATTATTATTAGAAAGGAGTATCATTATTT
. : . : . : . : . : . :
rJMSF034C05+ TACTCTGCTGTATTAATTATTTGTTTTGCAGACTCACTTTTTCTTATAATTATAATTA
rJMSF052O01+ TACTCTGCTGTATTAATTATTTGTTTTGCAGACTCACTTTTTCTTATAATTATAATTATT
____________________________________________________________
consensus TACTCTGCTGTATTAATTATTTGTTTTGCAGACTCACTTTTTCTTATAATTATAATTATT