Contig 008683:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011M15Sequence614008683 (3)emb|CDP10970.1|3e-102unnamed protein product [Coffea canephora]
JMSF018C18Sequence441008683 (3)emb|CDP10970.1|3e-84unnamed protein product [Coffea canephora]731007068 (8)ref|XP_009605353.1|167PREDICTED: uncharacterized protein LOC104099923 [Nicotiana tomentosiformis]
JMSF051P06Sequence641023298ref|XP_009593179.1|213PREDICTED: uncharacterized protein LOC104089880 [Nicotiana tomentosiformis]714008683 (3)emb|CDP10970.1|6e-112unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF018C18+                                                TNTTCGCCATCAACGTCGACGAC
                      ____________________________________________________________
consensus                                                  TNTTCGCCATCAACGTCGACGAC
 
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JMSF018C18+           GAGAGCCGGAGCCGCAAAAAGCTGACGGTCGGAGGGAAAAACAACGCGTTCCCCTCACCC
                      ____________________________________________________________
consensus             GAGAGCCGGAGCCGCAAAAAGCTGACGGTCGGAGGGAAAAACAACGCGTTCCCCTCACCC
 
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JMSF018C18+           TCGCCGGACGGAAAATGGATCGTATTTCGGTCGGGCCGGTCGGGTCACAAGAATCTCTAC
JMFN011M15-                                                     GGTCACAAGAATCTCTAC
rJMSF051P06+                GACGGAAAATGGATCGTATTTCGGTCGGGCCGGTCGGGTCACAAGAATCTCTAC
                      ____________________________________________________________
consensus             TCGCCGGACGGAAAATGGATCGTATTTCGGTCGGGCCGGTCGGGTCACAAGAATCTCTAC
 
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JMSF018C18+           ATAATGGACGCCCTGGAAGGAGAAACGGGCGGGCTCTCCCGGCTAACGGAGGGGCCATGG
JMFN011M15-           ATAATGGACGCCCTGGAAGGAGAAACGGGCGGGCTCTCCCGGCTAACGGAGGGGCCATGG
rJMSF051P06+          ATAATGGACGCCCTGGAAGGAGAAACGGGCGGGCTCTCCCGGCTAACGGAGGGGCCATGG
                      ____________________________________________________________
consensus             ATAATGGACGCCCTGGAAGGAGAAACGGGCGGGCTCTCCCGGCTAACGGAGGGGCCATGG
 
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JMSF018C18+           AGTGATACCATGTGCAACTGGTCACCGGACGGCGAATGGATCGCCTTCGCGTCGGACCGG
JMFN011M15-           AGTGATACCATGTGCAACTGGTCACCGGACGGCGAATGGATCGCCTTCGCGTCGGACCGG
rJMSF051P06+          AGTGATACCATGTGCAACTGGTCACCGGACGGCGAATGGATCGCCTTCGCGTCGGACCGG
                      ____________________________________________________________
consensus             AGTGATACCATGTGCAACTGGTCACCGGACGGCGAATGGATCGCCTTCGCGTCGGACCGG
 
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JMSF018C18+           GAAAACCCGGGTTCTGGAAGCTTCGAGTTGTTTCTAATTCACCCGAACGGGACGGGGCTC
JMFN011M15-           GAAAACCCGGGTTCTGGAAGCTTCGAGTTGTTTCTAATTCACCCGAACGGGACGGGGCTC
rJMSF051P06+          GAAAACCCGGGTTCTGGAAGCTTCGAGTTGTTTCTAATTCACCCGAACGGGACGGGGCTC
                      ____________________________________________________________
consensus             GAAAACCCGGGTTCTGGAAGCTTCGAGTTGTTTCTAATTCACCCGAACGGGACGGGGCTC
 
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JMSF018C18+           CGAAAACTGGTCCAGAGCGGAACGGGTGGGCGGACCAACCACCCGTGGTTCAGCCCGGAT
JMFN011M15-           CGAAAACTGGTCCAGAGCGGAACGGGTGGGCGGACCAACCACCCGTGGTTCAGCCTGGAT
rJMSF051P06+          CGAAAACTGGTCCAGAGCGGAACGGGTGGGCGGACCAACCACCCGTGGTTCAGCCCGGAT
                      ____________________________________________________________
consensus             CGAAAACTGGTCCAGAGCGGAACGGGTGGGCGGACCAACCACCCGTGGTTCAGCCCGGAT
 
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JMSF018C18+           GGGAAGCACGTGGTGTTCACCACCGACTACGGCGGCGTATCAGCTGAGCCCATCTCC   
JMFN011M15-           GGGAAGCACGTGGTGTTCACCACCGACTACGGCGGCGTATCAGCTGAGCCCATCTCCAAC
rJMSF051P06+          GGGAAGCACGTGGTGTTCACCACCGACTACGGCGGCGTATCAGCTGAGCCCATCTCCAAC
                      ____________________________________________________________
consensus             GGGAAGCACGTGGTGTTCACCACCGACTACGGCGGCGTATCAGCTGAGCCCATCTCCAAC
 
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JMFN011M15-           CCTCATCATTATCAGCCCTACGGCGAGATATTCATCATCAGATCCGACGGCTCAGATTTG
rJMSF051P06+          CCTCATCATTATCAGCCCTACGGCGAGATATTCATCATCAGATCCGACGGCTCAGATTTG
                      ____________________________________________________________
consensus             CCTCATCATTATCAGCCCTACGGCGAGATATTCATCATCAGATCCGACGGCTCAGATTTG
 
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JMFN011M15-           CACAGATTAACCCATAATTCGTATGAGGATGGGACCCCCACTTGGGGACCCATTTACATC
rJMSF051P06+          CACAGATTAACCCATAATTCGTATGAGGATGGGACCCCCACTTGGGGACCCATTTACATC
                      ____________________________________________________________
consensus             CACAGATTAACCCATAATTCGTATGAGGATGGGACCCCCACTTGGGGACCCATTTACATC
 
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JMFN011M15-           CAGCCGAAGAATATTGAGTGGCCCAACGGTGGAGATGCATGCTCGTTTGAGGATTGCCAC
rJMSF051P06+          CAGCCGAAGAATATTGAGTGGCCCAACGGTGGAGATGCATGCTCGTTTGAGGATTGCCAC
                      ____________________________________________________________
consensus             CAGCCGAAGAATATTGAGTGGCCCAACGGTGGAGATGCATGCTCGTTTGAGGATTGCCAC
 
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JMFN011M15-           TGGTTAAACATAAGCCCAAACAATAATGCCAGTATTATTCAATGTGCTCACTTCCCAAAG
rJMSF051P06+          TGGTTAAACATAAGCCCAAACAATAATGCCAGTATTATTCAATGTGCTCACTTCCCAAAG
                      ____________________________________________________________
consensus             TGGTTAAACATAAGCCCAAACAATAATGCCAGTATTATTCAATGTGCTCACTTCCCAAAG
 
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JMFN011M15-           TGAGATTTGCTATTTTTGGATGGATTTTAAATTCTAAAGTTATATATATATAAAGT    
rJMSF051P06+          TGAGATTTGCTATTTTTGGATGGATTTTAAATTCTAAAGTTATATATATATAAAGTATAA
                      ____________________________________________________________
consensus             TGAGATTTGCTATTTTTGGATGGATTTTAAATTCTAAAGTTATATATATATAAAGTATAA
 
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rJMSF051P06+          TAATTATGTAAATACATGAGGTATGTACCATGAGAAGATTAGTTGTGTTACTTGTGTATT
                      ____________________________________________________________
consensus             TAATTATGTAAATACATGAGGTATGTACCATGAGAAGATTAGTTGTGTTACTTGTGTATT