Contig 008680:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011J13Sequence615008680 (4)ref|XP_010104285.1|8e-94hypothetical protein L484_005388 [Morus notabilis] gb|EXB99570.1| hypothetical p
JMFN039G09Sequence625008680 (4)ref|XP_010104285.1|2e-105hypothetical protein L484_005388 [Morus notabilis] gb|EXB99570.1| hypothetical p
JMSF007G15Sequence374006393 (2)799008680 (4)ref|XP_011101883.1|8e-127PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC
JMSF051J03Sequence675006393 (2)ref|XP_011101883.1|1e-18PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC742008680 (4)ref|XP_011101883.1|3e-118PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007G15+ GGGGTTTACGTCTTATTGGGC
                      ____________________________________________________________
consensus GGGGTTTACGTCTTATTGGGC
 
. : . : . : . : . : . :
rJMSF007G15+ TGAGGCCTGAGGAACTGGCTGAAAATCTTAAACTTCCATTCGAGTTCAGAGCTATGCCCG
rJMSF051J03+ TTCGAGTTCAGAGCTATGCCCG
                      ____________________________________________________________
consensus TGAGGCCTGAGGAACTGGCTGAAAATCTTAAACTTCCATTCGAGTTCAGAGCTATGCCCG
 
. : . : . : . : . : . :
rJMSF007G15+ CTCAATCTGCACTAGTTGCCCCAACCGTGCTGGGTTGCCAACCTGGAGAAACGGTTATTG
rJMSF051J03+ CTCAATCTGCACTAGTTGCCCCANCCGTGCTGGGTTGCCAACCTGGAGAAACGGTTATTG
                      ____________________________________________________________
consensus CTCAATCTGCACTAGTTGCCCCAACCGTGCTGGGTTGCCAACCTGGAGAAACGGTTATTG
 
. : . : . : . : . : . :
JMFN011J13- GCGTGTCAACAGTAAACCAAC
JMFN039G09- TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
rJMSF007G15+ TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
rJMSF051J03+ TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
                      ____________________________________________________________
consensus TCAACTTTGCTTTCCAGCTTCATCACATGCCAGATGAGAGCGTGTCAACAGTAAACCAAC
 
. : . : . : . : . : . :
JMFN011J13- GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
JMFN039G09- GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
rJMSF007G15+ GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
rJMSF051J03+ GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
                      ____________________________________________________________
consensus GAGACCAGCTTCTACGGATGGTGAAGAGCCTCAACCCGAAACTTGTAACTGTTGTAGAGC
 
. : . : . : . : . : . :
JMFN011J13- AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
JMFN039G09- AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
rJMSF007G15+ AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
rJMSF051J03+ AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
                      ____________________________________________________________
consensus AAGATGTGAACACCAATACTGCTCCATTCCTACCGAGATTTGCAGAAGCCTACAACTACT
 
. : . : . : . : . : . :
JMFN011J13- ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
JMFN039G09- ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
rJMSF007G15+ ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
rJMSF051J03+ ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
                      ____________________________________________________________
consensus ACTCAGCTGTGTTCGAATCTCTTGATGCAACTCTTCCAAGGGATAGCCAGGAGAGGATGA
 
. : . : . : . : . : . :
JMFN011J13- ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
JMFN039G09- ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
rJMSF007G15+ ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
rJMSF051J03+ ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
                      ____________________________________________________________
consensus ACGTAGAAAGGCATTGCCTGGCACGCGATATCATCAACATTATTGCTTGCGAGGGAGAGG
 
. : . : . : . : . : . :
JMFN011J13- AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
JMFN039G09- AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
rJMSF007G15+ AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
rJMSF051J03+ AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
                      ____________________________________________________________
consensus AGAGAATAGAGCGGTATGAGGTGGCGGGAAAATGGAGAGCGAGGATGATGATGGCGGGAT
 
. : . : . : . : . : . :
JMFN011J13- TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
JMFN039G09- TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
rJMSF007G15+ TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
rJMSF051J03+ TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
                      ____________________________________________________________
consensus TCAATCCATGCCCTATTAGCCGAAATGTCAATGATTCAATTCGAAAGCTTATAAAGCAAT
 
. : . : . : . : . : . :
JMFN011J13- ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
JMFN039G09- ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
rJMSF007G15+ ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
rJMSF051J03+ ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
                      ____________________________________________________________
consensus ACAGCGAGAGATACAAGGTGAAGGAGGATGCAGGGTCACTGCATTTTGGATGGGAAGACA
 
. : . : . : . : . : . :
JMFN011J13- AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
JMFN039G09- AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
rJMSF007G15+ AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
rJMSF051J03+ AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
                      ____________________________________________________________
consensus AAATCTTAATTGTGGCTTCTGCATGGAGATAATAAAGCTAAGCTAGTTAGCTAATGGTGT
 
. : . : . : . : . : . :
JMFN011J13- TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
JMFN039G09- TGGTGTGTGCCCCTCTCTATNCAGCTATGTCTGACTTTGTGACAATATTTTCGTTGTTAG
rJMSF007G15+ TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
rJMSF051J03+ TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
                      ____________________________________________________________
consensus TGGTGTGTGCCCCTCTCTATCAAGCTATGTCTGACTTTGTGACAATATTTTCGTTTTTAG
 
. : . : . : . : . : . :
JMFN011J13- ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAAC
JMFN039G09- ATTGNGATGCTCTGCATGATTTTGT
rJMSF007G15+ ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAAC
rJMSF051J03+ ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAACTTTATT
                      ____________________________________________________________
consensus ATTGGGATGCTCTGCATGATTTTGTATATTTAAGATATTACTCTCTCCGTCAACTTTATT