Contig 008675:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF050F21Sequence697008675 (2)emb|CDP13927.1|4e-93unnamed protein product [Coffea canephora]640008675 (2)ref|XP_009769610.1|288PREDICTED: uncharacterized protein LOC104220436 [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-                                                                     GG
                      ____________________________________________________________
consensus                                                                       GG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           AAAATGGAAACAGCTCTCAGCTTCAGGAGCTCCACTTGGGTCCCAGTCACGACGTCGTTT
                      ____________________________________________________________
consensus             AAAATGGAAACAGCTCTCAGCTTCAGGAGCTCCACTTGGGTCCCAGTCACGACGTCGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           CCTCAGTCTCATGTCAAGCTCAATTTATTGAGATTAAAGCGCTCCAGACGAGTGCAGAAT
                      ____________________________________________________________
consensus             CCTCAGTCTCATGTCAAGCTCAATTTATTGAGATTAAAGCGCTCCAGACGAGTGCAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           CGGCAGAATAATTGCCTGTTGATAGTGAAGTCTTCCGGGTCGAGCATCAATGGGTCTTCT
                      ____________________________________________________________
consensus             CGGCAGAATAATTGCCTGTTGATAGTGAAGTCTTCCGGGTCGAGCATCAATGGGTCTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           GACCCGTCTCCAGTCTCACCGAACAATATTTTCGTGGAAGAGGCCATTGGAGCAGAATAT
                      ____________________________________________________________
consensus             GACCCGTCTCCAGTCTCACCGAACAATATTTTCGTGGAAGAGGCCATTGGAGCAGAATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           GGAGAGGGGTTTGAGACATTTAGAGCGGATGGATTACTCAAAGTTGATGTTGATTTTCTA
                      ____________________________________________________________
consensus             GGAGAGGGGTTTGAGACATTTAGAGCGGATGGATTACTCAAAGTTGATGTTGATTTTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           AATGATAGACTGCAAGAAGGTTTCCTTCAAAGAATCCGGTATGCAATGAAACCTGACGAA
                      ____________________________________________________________
consensus             AATGATAGACTGCAAGAAGGTTTCCTTCAAAGAATCCGGTATGCAATGAAACCTGACGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           GCTTATGGATTAGTTTTCTCTTGGGACAATGTAGTGGCAGATACTCATGCTCTAAGGTTG
                      ____________________________________________________________
consensus             GCTTATGGATTAGTTTTCTCTTGGGACAATGTAGTGGCAGATACTCATGCTCTAAGGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           AATGCCTGGAAGCAACTTGCTTCTGAAGAAGGGAAGGAAATTGCCGAAGATGATAGTATG
                      ____________________________________________________________
consensus             AATGCCTGGAAGCAACTTGCTTCTGAAGAAGGGAAGGAAATTGCCGAAGATGATAGTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           CAAAGACTTTTGCTTTATGGTGGTGTCGATCATGTACTAAACAAGGTGTTGCGGTGGGAG
                      ____________________________________________________________
consensus             CAAAGACTTTTGCTTTATGGTGGTGTCGATCATGTACTAAACAAGGTGTTGCGGTGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           AAGGAAGAAAATGATTTGGTTCGATTGAGGTTAAGGTTATCACAGTTATTCTGTGACAAT
                      ____________________________________________________________
consensus             AAGGAAGAAAATGATTTGGTTCGATTGAGGTTAAGGTTATCACAGTTATTCTGTGACAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           CTACTCCAACTCTCGAAACCAATCGAAGGGCTGAAGGAATGGCTTGATGCTATATCAACA
rJMSF050F21+                              AATCGAAGGGCTGAAGGAATGGCTTGATGCTATATCAACA
                      ____________________________________________________________
consensus             CTACTCCAACTCTCGAAACCAATCGAAGGGCTGAAGGAATGGCTTGATGCTATATCAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F21-           GCACGCATTCCTTGTGCAGTTGTTTCAAATCTAGA                         
rJMSF050F21+          GCACGCATTCCTTGTGCAGTTGTTTCAAATCTAGATCGAAAAAATATGGTTGACGCCTTA
                      ____________________________________________________________
consensus             GCACGCATTCCTTGTGCAGTTGTTTCAAATCTAGATCGAAAAAATATGGTTGACGCCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          GAACACCTGGGGCTCATGAAGTATTTTCAGGCTATTGTGTCAGAGGAAGACGGCATGGAA
                      ____________________________________________________________
consensus             GAACACCTGGGGCTCATGAAGTATTTTCAGGCTATTGTGTCAGAGGAAGACGGCATGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          TCCATAGCACAGAGGTTTCTTTCTGCAGCGGTAAAGTTGGATAGGAAGCCATCTAAGTGC
                      ____________________________________________________________
consensus             TCCATAGCACAGAGGTTTCTTTCTGCAGCGGTAAAGTTGGATAGGAAGCCATCTAAGTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          GTGGTGTTTGAAGACGACCCTAGAGGCATAACAGCGGCTCACAACTGTACAATGATGGCT
                      ____________________________________________________________
consensus             GTGGTGTTTGAAGACGACCCTAGAGGCATAACAGCGGCTCACAACTGTACAATGATGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          GTAGCACTCATCGGTGCTCACCCAGCGTATCATTTGGATCAGGCTGACCTTACAGTTGGC
                      ____________________________________________________________
consensus             GTAGCACTCATCGGTGCTCACCCAGCGTATCATTTGGATCAGGCTGACCTTACAGTTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          GGCTACAATGAGCTTTCAGTCATCAATCTCAGGAGATTATTTGCGCATAAAGGCTCCAAC
                      ____________________________________________________________
consensus             GGCTACAATGAGCTTTCAGTCATCAATCTCAGGAGATTATTTGCGCATAAAGGCTCCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          TTTATGGACCTGGAGAAGCAAATTGTGGAGAGAACTCCCCCCAGAAGGAAGCTGAGAATT
                      ____________________________________________________________
consensus             TTTATGGACCTGGAGAAGCAAATTGTGGAGAGAACTCCCCCCAGAAGGAAGCTGAGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          GACACCATTTTNTGATCCAAATCCAACCCTCTTTCACCTCACTTGTACATTTTTCATTAG
                      ____________________________________________________________
consensus             GACACCATTTTNTGATCCAAATCCAACCCTCTTTCACCTCACTTGTACATTTTTCATTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          GGTAGATCACACTCATCATTTAGGGGCTCTTTTTGCTTCCTTTATTATTATTTTTTTCAT
                      ____________________________________________________________
consensus             GGTAGATCACACTCATCATTTAGGGGCTCTTTTTGCTTCCTTTATTATTATTTTTTTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050F21+          TTAGGATTTATATTATTATATATAAATAGTAGAAACCACAAAGCATGTATTAACACAAAT
                      ____________________________________________________________
consensus             TTAGGATTTATATTATTATATATAAATAGTAGAAACCACAAAGCATGTATTAACACAAAT