Contig 008673:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007K01Sequence457011658 (4)ref|XP_004232573.1|7e-60PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]754008673 (3)ref|XP_009801334.1|3e-78PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]
JMSF047B07Sequence727011658 (4)ref|XP_009588847.1|1e-113PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana tomentosifor621008673 (3)ref|XP_009801334.1|2e-66PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]
JMSF050B03Sequence688011658 (4)ref|XP_009588847.1|1e-120PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana tomentosifor744008673 (3)ref|XP_009801334.1|3e-93PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007K01+ TTCTGCAGGCCTTTGG
                      ____________________________________________________________
consensus TTCTGCAGGCCTTTGG
 
. : . : . : . : . : . :
rJMSF007K01+ GGGGTTCACTGTGTTCTTCTATGGCCTTGGAGTGGCTGTGTATGCCTTTGAAGGGATAGG
rJMSF050B03+ TGTGTATGCCTTTGAAGGGATAGG
                      ____________________________________________________________
consensus GGGGTTCACTGTGTTCTTCTATGGCCTTGGAGTGGCTGTGTATGCCTTTGAAGGGATAGG
 
. : . : . : . : . : . :
rJMSF007K01+ AATGGTGTTGCCATTGGAATCAGAGATGAGGGACAAGGCTAAATTTGGGAGAGTCTTGGG
rJMSF050B03+ AATGGTGTTGCCATTGGAATCAGAGATGAGGGACAAGGCTAAATTTGGGAGAGTCTTGGG
                      ____________________________________________________________
consensus AATGGTGTTGCCATTGGAATCAGAGATGAGGGACAAGGCTAAATTTGGGAGAGTCTTGGG
 
. : . : . : . : . : . :
rJMSF007K01+ ATTCTCAATGGCCCTCATTTCTGTCATGTATGGAGCTTTTGGAATCTTGGGTTACATGGC
rJMSF047B07+ TTTGGAATCTTGGGTTACATGGC
rJMSF050B03+ ATTCTCAATGGCCCTCATTTCTGTCATGTATGGAGCTTTTGGAATCTTGGGTTACATGGC
                      ____________________________________________________________
consensus ATTCTCAATGGCCCTCATTTCTGTCATGTATGGAGCTTTTGGAATCTTGGGTTACATGGC
 
. : . : . : . : . : . :
rJMSF007K01+ ATTCGGGGACGAAACAAACGATATAATCACCTCGAATATGGGGCGGGGAATCGTGAGTAG
rJMSF047B07+ ATTCGGGGACGAAACAAACGATATAATCACCTCGAATATGGGGCGGGGAATCGTGAGTAG
rJMSF050B03+ ATTCGGGGACGAAACAAACGATATAATCACCTCGAATATGGGGCGGGGAATCGTGAGTAG
                      ____________________________________________________________
consensus ATTCGGGGACGAAACAAACGATATAATCACCTCGAATATGGGGCGGGGAATCGTGAGTAG
 
. : . : . : . : . : . :
rJMSF007K01+ CATAGTCCAAATCGGACTATGCATCAACCTGTTCTTCACATTCCCGCTAATGATGAACCC
rJMSF047B07+ CATAGTCCAAATCGGACTATGCATCAACCTGTTCTTCACATTCCCGCTAATGATGAACCC
rJMSF050B03+ CATAGTCCAAATCGGACTATGCATCAACCTGTTCTTCACATTCCCGCTAATGATGAACCC
                      ____________________________________________________________
consensus CATAGTCCAAATCGGACTATGCATCAACCTGTTCTTCACATTCCCGCTAATGATGAACCC
 
. : . : . : . : . : . :
rJMSF007K01+ AGTGTACGAAGTCCTCGAGAGGCGAGTGACCCATGGGCAGACAT-TTTGTTGCTGAGATG
rJMSF047B07+ AGTGTACGAAGTCCTCGAGAGGCGAGTGACCCATGGGCAGACATGTTTGTTGCTGAGATG
rJMSF050B03+ AGTGTACGAAGTCCTCGAGAGGCGAGTGACCCATGGGCAGACATGTTTGTTGCTGAGATG
                      ____________________________________________________________
consensus AGTGTACGAAGTCCTCGAGAGGCGAGTGACCCATGGGCAGACATGTTTGTTGCTGAGATG
 
. : . : . : . : . : . :
rJMSF007K01+ GGGAATGGTGTTTGGGGTGAGTTTGATGGCTCTGCTAATCCCAAACTTTGCGGATTTCTT
rJMSF047B07+ GGGAATGGTGTTTGGGGNGAGTTTGATGGCTCTGCTAATCCCAAACTTTGCGGATTTCTT
rJMSF050B03+ GGGAATGGTGTTTGGGGTGAGTTTGATGGCTCTGCTAATCCCAAACTTTGCGGATTTCTT
                      ____________________________________________________________
consensus GGGAATGGTGTTTGGGGTGAGTTTGATGGCTCTGCTAATCCCAAACTTTGCGGATTTCTT
 
. : . : . : . : . : . :
rJMSF007K01+ GTCACTGGTGGGGAGCAGTGTGTGCATTGTTTTAGGGTTTGTGTTGCCTGCTTTGTTTCA
rJMSF047B07+ GTCACTGGTGGGGAGCAGTGTGTGCATTGTTTTAGGGTTTGTGTTGCCTGCTTTGTTTCA
rJMSF050B03+ GTCACTGGTGGGGAGCAGTGTGTGCATTGTTTTAGGGTTTGTGTTGCCTGCTTTGTTTCA
                      ____________________________________________________________
consensus GTCACTGGTGGGGAGCAGTGTGTGCATTGTTTTAGGGTTTGTGTTGCCTGCTTTGTTTCA
 
. : . : . : . : . : . :
rJMSF007K01+ CTTGATTGTGTTCAAGCAGGAATTGGGGACTGTTGGATTGGTGTGTGATGGAGCACTCAC
rJMSF047B07+ CTTGATTGTGTTCAAGCAGGAATTGGGGACTGTTGGATTGGTGTGTGATGGAGCACTCAC
rJMSF050B03+ CTTGATTGTGTTCAAGCAGGAATTGGGGACTGTTGGATTGGTGTGTGATGGAGCACTCAC
                      ____________________________________________________________
consensus CTTGATTGTGTTCAAGCAGGAATTGGGGACTGTTGGATTGGTGTGTGATGGAGCACTCAC
 
. : . : . : . : . : . :
rJMSF007K01+ TGTGTTTGGCATCATTTTTGCTGTTTATGGGACTTGGTCTTCTCTGCTTGAGATCTTTGC
rJMSF047B07+ TGTGTTTGGCATCATTTTTGCTGTTTATGGGACTTGGTCTTCTCTGCTTGAGATCTTTGC
rJMSF050B03+ TGTGTTTGGCATCATTTTTGCTGTTTATGGGACTTGGTCTTCTCTGCTTGAGATCTTTGC
                      ____________________________________________________________
consensus TGTGTTTGGCATCATTTTTGCTGTTTATGGGACTTGGTCTTCTCTGCTTGAGATCTTTGC
 
. : . : . : . : . : . :
rJMSF007K01+ AACTAAGGCTTAAGCTATTGTAATTATGTGAGTTGATGATTATCAGTTTTTGTTTTACAT
rJMSF047B07+ AACTAAGGCTTAAGCTATTGTAATTATGTGAGTTGATGATTATCAGTTTTTGTTTTACAT
rJMSF050B03+ AACTAAGGCTTAAGCTATTGTAATTATGTGAGTTGATGATTATCAGTTTTTGTTTTACAT
                      ____________________________________________________________
consensus AACTAAGGCTTAAGCTATTGTAATTATGTGAGTTGATGATTATCAGTTTTTGTTTTACAT
 
. : . : . : . : . : . :
rJMSF007K01+ ATAGCTGTGTAAAAAGTGTGCATCTTGCTCTATACAGTTGTGAAAATTGTATCATATGTT
rJMSF047B07+ ATAGCTGTGTAAAAAGTGTGCATCTTGCTCTATACAGTTGTGAAAATTGTATCATATGTT
rJMSF050B03+ ATAGCTGTGTAAAAAGTGTGCATCTTGCTCTATACAGTTGTGAAAATTGTATCATATGTT
                      ____________________________________________________________
consensus ATAGCTGTGTAAAAAGTGTGCATCTTGCTCTATACAGTTGTGAAAATTGTATCATATGTT
 
. : . : . : . : . : . :
rJMSF007K01+ TGCAGACTTTGAATCT
rJMSF047B07+ TGCAGACTTTGAATCTTGTAGTGTGGTTACTTCTTGTTT
rJMSF050B03+ TGCAGACTTTGAATCTTGTAGTGTGGTTACTTTTTGTTTTGTACCATTTTTACCTTACAC
                      ____________________________________________________________
consensus TGCAGACTTTGAATCTTGTAGTGTGGTTACTTTTTGTTTTGTACCATTTTTACCTTACAC