Contig 008665:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N20Sequence520008665 (4)gb|AFR60863.1|3e-40sporamin B [Ipomoea batatas]679008665 (4)gb|AFR60863.1|4e-40sporamin B [Ipomoea batatas]
JMSF048O07Sequence645008665 (4)gb|AFR60863.1|4e-53sporamin B [Ipomoea batatas]712008665 (4)gb|AFR60863.1|1e-41sporamin B [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048O07- GAACATTACCTACAAACATCATAACTAC
                      ____________________________________________________________
consensus GAACATTACCTACAAACATCATAACTAC
 
. : . : . : . : . : . :
JMFF003N20- CTATTCTCCCAAGTTGTCGGCAACATGAAAACCCTCGCAATACTCTTATTCGCATTTTCC
JMSF048O07- CTATTCTCCCAAGTTGTCGGCAACATGAAAACCCTCGCAATACTCTTATTCGCATTTTCC
                      ____________________________________________________________
consensus CTATTCTCCCAAGTTGTCGGCAACATGAAAACCCTCGCAATACTCTTATTCGCATTTTCC
 
. : . : . : . : . : . :
JMFF003N20- CTCTATCTCCTTCCCAACCCAACTCACTCTGCGTTCAATCCAATCCGCCTTCCCATCCGC
JMSF048O07- CTCTATCTCCTTCCCAACCCAACTCACTCTGCGTTCAATCCAATCCGCCTTCCCATCCGC
                      ____________________________________________________________
consensus CTCTATCTCCTTCCCAACCCAACTCACTCTGCGTTCAATCCAATCCGCCTTCCCATCCGC
 
. : . : . : . : . : . :
JMFF003N20- CTTCCCACGGCCGACGCAGCAGTAGCCTCCGACAACACTCCGGTGGTGGACACCGACGGA
JMSF048O07- CTTCCCACGGCCGACGCAGCAGTAGCCTCCGACAACACTCCGGTGGTGGACACCGACGGA
rJMSF048O07+ GGCCGACGCAGCAGTAGCNTCCGACAACACTCCGGTGGTGGACACCGACGGA
                      ____________________________________________________________
consensus CTTCCCACGGCCGACGCAGCAGTAGCCTCCGACAACACTCCGGTGGTGGACACCGACGGA
 
. : . : . : . : . : . :
JMFF003N20- AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
JMSF048O07- AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
rJMSF048O07+ AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
                      ____________________________________________________________
consensus AACGAGCTCCGGGCCGGCGAAACTTACTACATAACCTCCATCGAAACGCCGCACTCCGCC
 
. : . : . : . : . : . :
JMFF003N20- TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
JMSF048O07- TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
rJMSF048O07+ TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
                      ____________________________________________________________
consensus TCCGCAGGAGTGCAACTTGCCTGGTTAAACTCTACAGCACAATGCGCGAGCAACGTGGTC
 
. : . : . : . : . : . :
JMFF003N20- GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
JMSF048O07- GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
rJMFF003N20+ CCCAACGCC
rJMSF048O07+ GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
                      ____________________________________________________________
consensus GTGCCGCGGTGCTTTTCGTTCGGCGACCCCATTAGGGTCAGGCCGACTGACCCCAACGCC
 
. : . : . : . : . : . :
JMFF003N20- GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
JMSF048O07- GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
rJMFF003N20+ GCCGTNGTCTTGCCGTNGAAGTTCNTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
rJMSF048O07+ GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
                      ____________________________________________________________
consensus GCCGTCGTCTTGCCGTCGAAGTTCCTGAGCTTCGAATTCTCCGTTTCGACGCCCCGGGTT
 
. : . : . : . : . : . :
JMFF003N20- TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
JMSF048O07- TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
rJMFF003N20+ TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
rJMSF048O07+ TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
                      ____________________________________________________________
consensus TGCGCGAGTAGTGTCTATTGGGGGATCCAGTACGACAGGCCATCCCAACAATTCTTCTTG
 
. : . : . : . : . : . :
JMFF003N20- AACTCCGGCGAGTTTG
JMSF048O07- AACTCCGGCGAGTTTGTCTCCGACCTTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
rJMFF003N20+ AACTCCGGCGAGTTTGTCTCCGACCNTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
rJMSF048O07+ AACTCCGGCGAGTTTGTCTCCGACCTTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
                      ____________________________________________________________
consensus AACTCCGGCGAGTTTGTCTCCGACCTTAGCGGCCAGTTCAAGATTGTAGCCCAACCGGAC
 
. : . : . : . : . : . :
JMSF048O07- CCTAACACTTACAGAATCGATTATTGTCCGTTTGGCGGCCACAAATGCT
rJMFF003N20+ CCTAACACTTACAGAATCGATTATTGTCCNTTTGGCGGCCACAAATGCT
rJMSF048O07+ CCTAACACTTACAGAATCGATTATTGTCCGTTTGGCGGCCACAAATGCTTCTACGTTAGC
                      ____________________________________________________________
consensus CCTAACACTTACAGAATCGATTATTGTCCGTTTGGCGGCCACAAATGCTTCTACGTTAGC
 
. : . : . : . : . : . :
rJMSF048O07+ CTAAACATCGACGAGTCAGCCGGGGCTGTGCGTTGGGTTCTGAGTGATAATAATTTTCTC
                      ____________________________________________________________
consensus CTAAACATCGACGAGTCAGCCGGGGCTGTGCGTTGGGTTCTGAGTGATAATAATTTTCTC
 
. : . : . : . : . : . :
rJMSF048O07+ CCTGTATGGTTCAGGAAAACTAGAAACTGTTTAGATTTCACACTGTAAACCGGGGTGTGA
                      ____________________________________________________________
consensus CCTGTATGGTTCAGGAAAACTAGAAACTGTTTAGATTTCACACTGTAAACCGGGGTGTGA
 
. : . : . : . : . : . :
rJMSF048O07+ GGTCAGAAATTTAGTTTTTCTGTGTTGGGTGTGGGATCTTGGAAGTTAATTATGCTAAAT
                      ____________________________________________________________
consensus GGTCAGAAATTTAGTTTTTCTGTGTTGGGTGTGGGATCTTGGAAGTTAATTATGCTAAAT
 
. : . : . : . : . : . :
rJMSF048O07+ AAGTGACGTTAGTTGCAGGTTTCACAACTTATAACAGATCCTAGATTGTTGTGTACTGTT
                      ____________________________________________________________
consensus AAGTGACGTTAGTTGCAGGTTTCACAACTTATAACAGATCCTAGATTGTTGTGTACTGTT