Contig 008657:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF047L05Sequence682008657 (2)ref|XP_006352931.1|2e-94PREDICTED: MIP18 family protein At1g68310-like [Solanum tuberosum]748008657 (2)ref|XP_006352931.1|4e-94PREDICTED: MIP18 family protein At1g68310-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF047L05-                                                  GGCTTTTCTTCACCACCGTCA
                      ____________________________________________________________
consensus                                                    GGCTTTTCTTCACCACCGTCA
 
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JMSF047L05-           GCCCGCCACTTACCTCTCTCTAACCCTGAAGAATAACAGTCCGTAGAAACACAGAATTTG
rJMSF047L05+                                              CAGTCCGTAGAAACACAGAATTTG
                      ____________________________________________________________
consensus             GCCCGCCACTTACCTCTCTCTAACCCTGAAGAATAACAGTCCGTAGAAACACAGAATTTG
 
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JMSF047L05-           GGGAAGATTGTCAGACTGCAGAGCTTGGGCGAACAGTTGAGAATAATTTCGGTGGCCATC
rJMSF047L05+          GGGAAGATTGTCAGACTGCAGAGCTTGGGCGAACAGTTGAGAATAATTTCGGTGGCCATC
                      ____________________________________________________________
consensus             GGGAAGATTGTCAGACTGCAGAGCTTGGGCGAACAGTTGAGAATAATTTCGGTGGCCATC
 
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JMSF047L05-           ATCCAAATTGGTGCTAAGAATGGTTTCTGAATTGATTAATGCTAATCCCATTGTTTATGA
rJMSF047L05+          ATCCAAATTGGTGCTAAGAATGGTTTCTGAATTGATTAATGCTAATCCCATTGTTTATGA
                      ____________________________________________________________
consensus             ATCCAAATTGGTGCTAAGAATGGTTTCTGAATTGATTAATGCTAATCCCATTGTTTATGA
 
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JMSF047L05-           GAAGAAGGAACGCCGAGCTGCTCGAAGTACACCGATTGTGGATGAATATGCAGTAGAACC
rJMSF047L05+          GAAGAAGGAACGCCGAGCTGCTCGAAGTACACCGATTGTGGATGAATATGCAGTAGAACC
                      ____________________________________________________________
consensus             GAAGAAGGAACGCCGAGCTGCTCGAAGTACACCGATTGTGGATGAATATGCAGTAGAACC
 
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JMSF047L05-           AATCGACCAACAAGAAATATTTGATCATCTTAGAGACATAAAAGATCCAGAGCATCCTTA
rJMSF047L05+          AATCGACCAACAAGAAATATTTGATCATCTTAGAGACATAAAAGATCCAGAGCATCCTTA
                      ____________________________________________________________
consensus             AATCGACCAACAAGAAATATTTGATCATCTTAGAGACATAAAAGATCCAGAGCATCCTTA
 
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JMSF047L05-           TTCCTTAGAAGAGCTGAAAGTTATTACAGAAGATGCCATTGAAATAGATGACAAGCGAAA
rJMSF047L05+          TTCCTTAGAAGAGCTGAAAGTTATTACAGAAGATGCCATTGAAATAGATGACAAGCGAAA
                      ____________________________________________________________
consensus             TTCCTTAGAAGAGCTGAAAGTTATTACAGAAGATGCCATTGAAATAGATGACAAGCGAAA
 
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JMSF047L05-           CCATGTCACTGTCACATTCACCCCAACCGTTGAGCATTGCAGTATGGCAACCGTCATAGG
rJMSF047L05+          CCATGTCACTGTCACATTCACCCCAACCGTTGAGCATTGCAGTATGGCAACCGTCATAGG
                      ____________________________________________________________
consensus             CCATGTCACTGTCACATTCACCCCAACCGTTGAGCATTGCAGTATGGCAACCGTCATAGG
 
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JMSF047L05-           CTTATGCCTGCGAGTTAAACTCATGCGCTGCCTGCCTTCTCGTTATAAAGTTGATATTAG
rJMSF047L05+          CTTATGCCTGCGAGTTAAACTCATGCGCTGCCTGCCTTCTCGTTATAAAGTTGATATTAG
                      ____________________________________________________________
consensus             CTTATGCCTGCGAGTTAAACTCATGCGCTGCCTGCCTTCTCGTTATAAAGTTGATATTAG
 
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JMSF047L05-           AGTTGCACCAGGAAGTCACGCCACGGAAGCTGCAGTAAATAAACAATTGAATGACAAAGA
rJMSF047L05+          AGTTGCACCAGGAAGTCACGCCACGGAAGCTGCAGTAAATAAACAATTGAATGACAAAGA
                      ____________________________________________________________
consensus             AGTTGCACCAGGAAGTCACGCCACGGAAGCTGCAGTAAATAAACAATTGAATGACAAAGA
 
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JMSF047L05-           ACGAGTTGCTGCAGCTTTGGAAAATCCCAACCTCGTGGACATGGTTAACGAATGCCTCGC
rJMSF047L05+          ACGAGTTGCTGCAGCTTTGGAAAATCCCAACCTCGTGGACATGGTTAACGAATGCCTCGC
                      ____________________________________________________________
consensus             ACGAGTTGCTGCAGCTTTGGAAAATCCCAACCTCGTGGACATGGTTAACGAATGCCTCGC
 
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JMSF047L05-           TCCATCTTATGAACCGTGAAGGGTAGGTTCTGTGCGATTATTCTCGAGCTCGCTTCCGGG
rJMSF047L05+          TCCATCTTATGAACCGTGAAGGGTAGGTTCTGTGCGATTATTCTCGAGCTCGCTTCCGGG
                      ____________________________________________________________
consensus             TCCATCTTATGAACCGTGAAGGGTAGGTTCTGTGCGATTATTCTCGAGCTCGCTTCCGGG
 
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JMSF047L05-           G                                                           
rJMSF047L05+          GCTCCATAAAATTCCCTATACTTTCTGTAGCCTGCTGAGTTTTAGTGGATTATTGCTTGT
                      ____________________________________________________________
consensus             GCTCCATAAAATTCCCTATACTTTCTGTAGCCTGCTGAGTTTTAGTGGATTATTGCTTGT
 
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rJMSF047L05+          TCTTCCTTTCCTTTATATGATGTTATACTTTTACACCACTCTTGATTCTTTCAGTTCATA
                      ____________________________________________________________
consensus             TCTTCCTTTCCTTTATATGATGTTATACTTTTACACCACTCTTGATTCTTTCAGTTCATA