Contig 008652:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF047E12+                    TTAAAGACACTACTGGCAAAAGAGACAGTGGGCAAAGTATTGGACTTAAA
                      ____________________________________________________________
consensus                       TTAAAGACACTACTGGCAAAAGAGACAGTGGGCAAAGTATTGGACTTAAA
 
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rJMSF035E23+                                                          CTTGTGCACTAN
rJMSF047E12+          GCAGCTTGCTACAATGACTGAGGGCTACACCGGCAGTGATCTCAAGAACTTGTGCACTAC
                      ____________________________________________________________
consensus             GCAGCTTGCTACAATGACTGAGGGCTACACCGGCAGTGATCTCAAGAACTTGTGCACTAC
 
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rJMSF035E23+          TGCAGCATATCGGCCAGTTAGAGAGTTGATCAAGCAAGAAAGACTTAAAGATGTTGAAAA
rJMSF047E12+          TGCAGCATATCGGCCAGTTAGAGAGTTGATCAAGCAAGAAAGACTTAAAGATGTTGAAAA
                      ____________________________________________________________
consensus             TGCAGCATATCGGCCAGTTAGAGAGTTGATCAAGCAAGAAAGACTTAAAGATGTTGAAAA
 
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rJMSF035E23+          GAAGCGCTTGGCTCAAGAATGTCCAAATTGTGGAGATGCTCCGACAGCGAATGAAGATAA
rJMSF047E12+          GAAGCGCTTGGCTCAAGAATGTCCAAATTGTGGAGATGCTCCGACAGCGAATGAAGATAA
                      ____________________________________________________________
consensus             GAAGCGCTTGGCTCAAGAATGTCCAAATTGTGGAGATGCTCCGACAGCGAATGAAGATAA
 
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rJMSF035E23+          AGGGGAAAGGGTCATCACCATCAGGCATTTGAATATGGACGATTTTATGGAGGCAAAAAA
rJMSF047E12+          AGGGGAAAGGGTCATCACCATCAGGCCTTTGAATATGGACGATTTTATGGAGGCAAAAAA
                      ____________________________________________________________
consensus             AGGGGAAAGGGTCATCACCATCAGGCCTTTGAATATGGACGATTTTATGGAGGCAAAAAA
 
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rJMSF035E23+          TCAGGTTGCTGCTAGCTTTGCAGCTGAAGGATCTATAATGAATGAACTGAAGCAATGGAA
rJMSF047E12+          TCAGGTTGCTGCTAGCTTTGCAGCTGAAGGATCTATAATGAATGAACTGAAGCAATGGAA
                      ____________________________________________________________
consensus             TCAGGTTGCTGCTAGCTTTGCAGCTGAAGGATCTATAATGAATGAACTGAAGCAATGGAA
 
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rJMSF035E23+          CAATTTATATGGGGAGGGAGGTTCAAGGAAGAAGGAACAGCTGACATACTTCCTGTAGAA
rJMSF047E12+          CAATTTATATGGGGAGGGAGGTTCAAGGAAGAAGGAACAGCTGACATACTTCCTGTAGAA
                      ____________________________________________________________
consensus             CAATTTATATGGGGAGGGAGGTTCAAGGAAGAAGGAACAGCTGACATACTTCCTGTAGAA
 
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rJMSF035E23+          ATAATGCTCATCCTGATCCTGATGTGGATCATCAAAAGATCAGAGGTTAAGTTCCTGGAA
rJMSF047E12+          ATAATGCTCATCCTGATCCTGATGTGGATCATCAAAAGATCAGAGGTTAAGTTCCTGGAA
                      ____________________________________________________________
consensus             ATAATGCTCATCCTGATCCTGATGTGGATCATCAAAAGATCAGAGGTTAAGTTCCTGGAA
 
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rJMSF035E23+          ATCTGACGGTGTGTATTGTAGAACTGGCAATCCAACCTGAGATCTTTGACCGTAGGAGCA
rJMSF047E12+          ATCTGACGGTGTGTATTGTAGAACTGGCAATCCAACCTGAGATCTTTGACCGTAGGAGCA
                      ____________________________________________________________
consensus             ATCTGACGGTGTGTATTGTAGAACTGGCAATCCAACCTGAGATCTTTGACCGTAGGAGCA
 
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rJMSF035E23+          ACTGAAGCCCGGATTATGATTTCTGCCACGCTCATATATATATAGACTGGATTATGATAT
rJMSF047E12+          ACTGAAGCCCGGATTATGATTTCTGCCACGCTCATATATATATAGACTGGATTATGATAT
                      ____________________________________________________________
consensus             ACTGAAGCCCGGATTATGATTTCTGCCACGCTCATATATATATAGACTGGATTATGATAT
 
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rJMSF035E23+          TGGTAAAAGTTTGTATTATATATAGTTAATCATAGATTTTATTCCAGGGGAACATTAGTG
rJMSF047E12+          TGGTAAAAGTTTGTATTATATATAGTTAATCATAGATTTTATTCCAGGGGAACATTAGTG
                      ____________________________________________________________
consensus             TGGTAAAAGTTTGTATTATATATAGTTAATCATAGATTTTATTCCAGGGGAACATTAGTG
 
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rJMSF035E23+          GGTTTAGGCTTCTGGTCTGCTGCTTTCATTCTTATGTCTTTGGTTGTGGAACACACATAT
rJMSF047E12+          GGTTTAGGCTTCTGGTCTGCTGCTTTCATTCTTATGTCTTTGGTTGTGGAACACACATAT
                      ____________________________________________________________
consensus             GGTTTAGGCTTCTGGTCTGCTGCTTTCATTCTTATGTCTTTGGTTGTGGAACACACATAT
 
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rJMSF035E23+          GCTCCGAGAGAAATTAGCAGACATGTGGTTCACTTT                        
rJMSF047E12+          GCTCCGAGAGAAATTAGCAGACATGTGGTTCACTTTATGGTTCGATGTTGAAAACCTTGA
                      ____________________________________________________________
consensus             GCTCCGAGAGAAATTAGCAGACATGTGGTTCACTTTATGGTTCGATGTTGAAAACCTTGA