Contig 008640:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045C02+                                               AGGATGGAATGGGTTAACCGCTA
                      ____________________________________________________________
consensus                                                  AGGATGGAATGGGTTAACCGCTA
 
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rJMSF045C02+          CAAATGAATCTACTAGATGTTCTTGGGGAAACGATAAAGAGGATATTTCATCTACAATAT
                      ____________________________________________________________
consensus             CAAATGAATCTACTAGATGTTCTTGGGGAAACGATAAAGAGGATATTTCATCTACAATAT
 
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rJMSF018I16+                             GGATTCAGAACCGAGATGGGACACTGAGCCTAATTATTATT
rJMSF045C02+          CAGGTCCCGGTCCAATTTGGGATTCAGAACCGAGATGGGACACTGAGCCTAATTATTATT
                      ____________________________________________________________
consensus             CAGGTCCCGGTCCAATTTGGGATTCAGAACCGAGATGGGACACTGAGCCTAATTATTATT
 
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rJMSF018I16+          TTCACGTGGAAAATCCTATTGAATTGCCCGGACCACCACC-GGAAGACGCCATCGAAGTT
rJMFF040G07+                             TGAATTGCCCGGACCACCACCGGGAAGACGCCATCGAAGTT
rJMSF045C02+          TTCACGTGGAAAATCCTATTGAATTGCCCGGACCACCACC-GGAAGACGCCATCGAAGTT
                      ____________________________________________________________
consensus             TTCACGTGGAAAATCCTATTGAATTGCCCGGACCACCACC-GGAAGACGCCATCGAAGTT
 
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rJMSF018I16+          GCTCAAAAAGAGATTCCAATCAAGTCCGAAGAGAAATGGGTCTCCACTAAAGGTCAATTT
rJMFF040G07+          GCTCAAAAAGAGATTCCAATCAAGTCCGAAGAGAAATGGGTCTCCACTAAAGGTCAATTT
rJMSF045C02+          GCTCAAAAAGAGATTCCAATCAAGTCCGAAGAGAAATGGGTCTCCACTAAAGGTCAATTT
                      ____________________________________________________________
consensus             GCTCAAAAAGAGATTCCAATCAAGTCCGAAGAGAAATGGGTCTCCACTAAAGGTCAATTT
 
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rJMSF018I16+          CTTGGTATCCTGGTGTGCAACCATGCGTGTAAAACTGTTCAAAGTTTGAGCTCGCAGATT
rJMFF040G07+          CTTGGTATCCTGGTGTGCAACCATGCGTGTAAAACTGTTCAAAGTTTGATCTCGCAGATT
rJMSF045C02+          CTTGGTATCCTGGTGTGCAACCATGCGTGTAAAACTGTTCAAAGTTTGAGCTCGCAGATT
                      ____________________________________________________________
consensus             CTTGGTATCCTGGTGTGCAACCATGCGTGTAAAACTGTTCAAAGTTTGAGCTCGCAGATT
 
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rJMSF018I16+          TTGGCCCCTAAAGCCGAGCATGATGATAACATGTTAGATTTGTTGTTGGTCCGGGGAAGT
rJMFF040G07+          TTGGCCCCTAAAGCCGAGCATGATGATAACATGTTAGATTTGTTGTTGGTCCGGGGAAGT
rJMSF045C02+          TTGGCCCCTAAAGCCGAGCATGATGATAACATGTTAGATTTGTTGTTGGTCCGGGGAAGT
                      ____________________________________________________________
consensus             TTGGCCCCTAAAGCCGAGCATGATGATAACATGTTAGATTTGTTGTTGGTCCGGGGAAGT
 
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rJMSF018I16+          GGAAGGCTTAAGCTTTTGCGATTTTTGTTGCTTCTGCAAATGGGTCGACACATCACACTG
rJMFF040G07+          GGAAGGCTTAAGCTTTTGCGATTTTTGTTGCTTCTGCAAATGGGTCGACACATCACACTG
rJMSF045C02+          GGAAGGCTTAAGCTTTTGCGATTTTTGTTGCTTCTGCAAATGGGTCGACACATCACACTG
                      ____________________________________________________________
consensus             GGAAGGCTTAAGCTTTTGCGATTTTTGTTGCTTCTGCAAATGGGTCGACACATCACACTG
 
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rJMSF018I16+          CCATACGTTGAATATGTTAAGGTAAAATCAGTGAAGGTTAAGCCCGGGAAGCGCTCACAC
rJMFF040G07+          CCATACGTTGAATATGTTAAGGTAAAATCAGTGAAGGTTAAGCCCGGGAAGCGCTCACAC
rJMSF045C02+          CCATACGTTGAATATGTTAAGGTAAAATCAGTGAAGGTTAAGCCCGGGAAGCGCTCACAC
                      ____________________________________________________________
consensus             CCATACGTTGAATATGTTAAGGTAAAATCAGTGAAGGTTAAGCCCGGGAAGCGCTCACAC
 
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rJMSF018I16+          AATGGATGTGGAATTGACGGTGAACTATTTCCCATAAATGGGACAGTCATCTCATCCATA
rJMFF040G07+          AATGGATGTGGAATTGACGGTGAACTATTTCCCATAAATGGGACAGTCATCTCATCCATA
rJMSF045C02+          AATGGATGTGGAATTGACGGTGAACTATTTCCCATAAATGGGACAGTCATCTCATCCATA
                      ____________________________________________________________
consensus             AATGGATGTGGAATTGACGGTGAACTATTTCCCATAAATGGGACAGTCATCTCATCCATA
 
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rJMSF018I16+          CTTCCCGAACAGTGCAGGCTTATTGGCCGCGCACAAAATAAATAGTGATGACTCTCTGGT
rJMFF040G07+          CTTCCCGAACAGTGCAGGCTTATTGGCCGCGCACAAAATAAATAGTGATGACTCTCTGGT
rJMSF045C02+          CTTCCCGAACAGTGCAGGCTTATTGGCCGCGCACAAAATAAATAGTGATGACTCTCTGGT
                      ____________________________________________________________
consensus             CTTCCCGAACAGTGCAGGCTTATTGGCCGCGCACAAAATAAATAGTGATGACTCTCTGGT
 
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rJMSF018I16+          AAGCTGTTGCGAGGTTCTGTGGCCCCGTTTAATTCTATGGCTCGAGTCTGGTAATGAATC
rJMFF040G07+          AAGCTGTTGCGAGGTTCTGTGGCCCCGTTTAATTCTATGGCTCGAGTCTGGTAATGAATC
rJMSF045C02+          AAGCTGTTGCGAGGTTCTGTGGCCCCGTTTAATTCTATGGCTCGAGTCTGGTAATGAATC
                      ____________________________________________________________
consensus             AAGCTGTTGCGAGGTTCTGTGGCCCCGTTTAATTCTATGGCTCGAGTCTGGTAATGAATC
 
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rJMSF018I16+          TGAAGAGCAGTTTGTAGCGGCAAAACGTGTTTTGTTGTTTCTGAGTTTGAGGCCCTTGTA
rJMFF040G07+          TGAAGAGCAGTTTGTAGCGGCAAAACGTGTTTTGTTGTTTCTGAGTTTGAGGCCCTTGTA
rJMSF045C02+          TGAAGAGCAGTTTGTAGCGGCAAAACGTGTTTTGTTGTTTCTGAGTTTGAGGCCCTTGTA
                      ____________________________________________________________
consensus             TGAAGAGCAGTTTGTAGCGGCAAAACGTGTTTTGTTGTTTCTGAGTTTGAGGCCCTTGTA
 
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rJMSF018I16+          AATTTTGTTAATGTTTTCCAAATCCTAAGTTATTCGTCATTCTATTCTCATATGTATCAT
rJMFF040G07+          AATTTTGTTAATGTTTTCCAAATCCTAAGTTATTCTTCATTCTATTCTCATATGTATCAT
rJMSF045C02+          AATTTTGTTAATGTTTTCCAAATCCTAAGTTATTCGTCATTCTATTCTCATATGTATCAT
                      ____________________________________________________________
consensus             AATTTTGTTAATGTTTTCCAAATCCTAAGTTATTCGTCATTCTATTCTCATATGTATCAT
 
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rJMSF018I16+          TGGTAATTTGCTACCTGTCTGCTGCTGAATATAAGTTGGCTTTTGTACTGAGAATGGTTG
rJMFF040G07+          T                                                           
rJMSF045C02+          TGGTAATTTGCTACCTGTCTGCTGCTGAATATAAGTTGGCTTTTGTACTGAGAATGGTTG
                      ____________________________________________________________
consensus             TGGTAATTTGCTACCTGTCTGCTGCTGAATATAAGTTGGCTTTTGTACTGAGAATGGTTG