Contig 008631:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF043K17Sequence798008631 (2)744008631 (2)

Alignment

This contig is upended


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JMSF043K17-                                                            GATAGTCTCTG
                      ____________________________________________________________
consensus                                                              GATAGTCTCTG
 
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JMSF043K17-           TGCTAGGTTTTCTCACCGTATCTCTCGTAAATCCAGTGTTTCATCTCTCTTATGCTACTA
                      ____________________________________________________________
consensus             TGCTAGGTTTTCTCACCGTATCTCTCGTAAATCCAGTGTTTCATCTCTCTTATGCTACTA
 
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JMSF043K17-           CTTTATTCTTAGGTTTGATGTTGAATTCTGTGTTTGAGTACTGGCTGTGATGTTCAAAAT
                      ____________________________________________________________
consensus             CTTTATTCTTAGGTTTGATGTTGAATTCTGTGTTTGAGTACTGGCTGTGATGTTCAAAAT
 
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JMSF043K17-           CTACCTATTTTATGAGAGAATTTACTTCTCTTGTGATTAGAAAACCAATGGATCCTTCTG
                      ____________________________________________________________
consensus             CTACCTATTTTATGAGAGAATTTACTTCTCTTGTGATTAGAAAACCAATGGATCCTTCTG
 
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JMSF043K17-           AGCCTACTCTGCATTTTATTTTATTTTTTTTTAAATTTTTTTTACTTGTATGTTTACATG
                      ____________________________________________________________
consensus             AGCCTACTCTGCATTTTATTTTATTTTTTTTTAAATTTTTTTTACTTGTATGTTTACATG
 
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JMSF043K17-           CCATCGAGGTGAGGATAATCGATTCGGAAAGGATATATGTCGATCGGAAATACTTCCAGA
                      ____________________________________________________________
consensus             CCATCGAGGTGAGGATAATCGATTCGGAAAGGATATATGTCGATCGGAAATACTTCCAGA
 
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JMSF043K17-           CTACAATTATCTGATCGATGGCTATTTCCGCTCTTTATCTCAATTGAATTCAGGGTTAAT
                      ____________________________________________________________
consensus             CTACAATTATCTGATCGATGGCTATTTCCGCTCTTTATCTCAATTGAATTCAGGGTTAAT
 
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JMSF043K17-           TGATATTTTTGTATAGATTTTACAAGAATGTGATATCATTGTCTAAATTTTAAATTTTAG
                      ____________________________________________________________
consensus             TGATATTTTTGTATAGATTTTACAAGAATGTGATATCATTGTCTAAATTTTAAATTTTAG
 
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JMSF043K17-           ATTATGTTGTGTAAAGTATTAATGTTAGTATCTTCTTTTTAAATAGGGGATTTAAAAAGA
rJMSF043K17+                                              TTTTAAATAGGGGATTTAAAAAGA
                      ____________________________________________________________
consensus             ATTATGTTGTGTAAAGTATTAATGTTAGTATCTTCTTTTTAAATAGGGGATTTAAAAAGA
 
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JMSF043K17-           ATAGTTGTATTATTTTCTTTTAATTGTTTTTGTTGATGAATGTAAAAAAAAAGGTAAAAG
rJMSF043K17+          ATAGGTGTATTATTTTCTTTTAANTGTTTTTGNTGANGAATGTAAAAAAAAAGGTAAAAG
                      ____________________________________________________________
consensus             ATAGTTGTATTATTTTCTTTTAATTGTTTTTGTTGATGAATGTAAAAAAAAAGGTAAAAG
 
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JMSF043K17-           TATTGCTTTCTTTTCACTTTGNGATGAAAATTGCTTCTTCTTCTCAACTATGGAGTAAGT
rJMSF043K17+          TATTGCTTTCTTTTCACTTTGTGATGAAAATTGCTTCTTCTTCTCAACTATGGAGTAAGT
                      ____________________________________________________________
consensus             TATTGCTTTCTTTTCACTTTGTGATGAAAATTGCTTCTTCTTCTCAACTATGGAGTAAGT
 
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JMSF043K17-           GAGAAGAAGGTAATGTCATTGTTTTTAGAGTGAAAAGTCATTGGTATTATCTTCTTTCTA
rJMSF043K17+          GAGAAGAAGGTAATGTCATTGTTTTTAGAGTGAAAAGTCATTGGTATTATCTTCNTTCTA
                      ____________________________________________________________
consensus             GAGAAGAAGGTAATGTCATTGTTTTTAGAGTGAAAAGTCATTGGTATTATCTTCTTTCTA
 
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JMSF043K17-           ATATTTATATGTTTCAATAAAAAAAATATAAAAGAAAGTATTTTATATAAAGTTATCTAG
rJMSF043K17+          ATANTTATATGNTTCNATAAAAAAAATATAAAAGAAAGTATTTTATATAAAGTTATCTAG
                      ____________________________________________________________
consensus             ATATTTATATGTTTCAATAAAAAAAATATAAAAGAAAGTATTTTATATAAAGTTATCTAG
 
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JMSF043K17-           AATTTTGAATCTGCACAATTTTTTTTCCATTTTNGTAAAATTTGTCATTTGANAAAGTAT
rJMSF043K17+          AATTTTGAATCTGCNCAATTTTTTTTCCNTTTTTGTAAAATTTGTCNTTTGATAAAGTAT
                      ____________________________________________________________
consensus             AATTTTGAATCTGCACAATTTTTTTTCCATTTTTGTAAAATTTGTCATTTGATAAAGTAT
 
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JMSF043K17-           TTATGTA                                                     
rJMSF043K17+          TTATGTAGTTTTATAGGCGTAGTTTCGGAATTGTTCGATTGTTTGTACCCGGTTTCNGTT
                      ____________________________________________________________
consensus             TTATGTAGTTTTATAGGCGTAGTTTCGGAATTGTTCGATTGTTTGTACCCGGTTTCNGTT
 
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rJMSF043K17+          TATGTAAAGCTTTTTTTTTTCTGCCGTTCTGTCGTTTAGTGTACCGCCGCCTCCTTGCGA
                      ____________________________________________________________
consensus             TATGTAAAGCTTTTTTTTTTCTGCCGTTCTGTCGTTTAGTGTACCGCCGCCTCCTTGCGA
 
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rJMSF043K17+          TGTAGTTTGGTGTGGTCGACGGATACTGAAATTTTAGCCATTTGCGTTGGTAGGCTTGCC
                      ____________________________________________________________
consensus             TGTAGTTTGGTGTGGTCGACGGATACTGAAATTTTAGCCATTTGCGTTGGTAGGCTTGCC
 
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rJMSF043K17+          GACTGTTAGCTGGCTTAAGTTATTGGTCCTCGCACCAAATTTTCTGTGGAGTTCATGAAT
                      ____________________________________________________________
consensus             GACTGTTAGCTGGCTTAAGTTATTGGTCCTCGCACCAAATTTTCTGTGGAGTTCATGAAT
 
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rJMSF043K17+          GTTCTAGCCGTTTTAGAATTATATTTTAAAAGAAATATATTTTTTTCGTACTATAATTTT
                      ____________________________________________________________
consensus             GTTCTAGCCGTTTTAGAATTATATTTTAAAAGAAATATATTTTTTTCGTACTATAATTTT
 
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rJMSF043K17+          AAGAAGGTGAAATTTTTAAATAATTTTATAGGTGGTGTAAATAGCAATTTGAATGTAAAT
                      ____________________________________________________________
consensus             AAGAAGGTGAAATTTTTAAATAATTTTATAGGTGGTGTAAATAGCAATTTGAATGTAAAT
 
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rJMSF043K17+          AGTTATATTTACATTATTGTGGTCAAATGTAATTTAATTACACAAAATTAAATATGGAAT
                      ____________________________________________________________
consensus             AGTTATATTTACATTATTGTGGTCAAATGTAATTTAATTACACAAAATTAAATATGGAAT