Contig 008626:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042G07Sequence786008626 (2)ref|XP_009783128.1|3e-64PREDICTED: glutathione S-transferase zeta class-like [Nicotiana sylvestris]767008626 (2)ref|XP_009612147.1|1e-48PREDICTED: glutathione S-transferase zeta class-like [Nicotiana tomentosiformis

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-                                                                    GGT
                      ____________________________________________________________
consensus                                                                      GGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           TGATCACTTGATCATGGCGGAGACAGGCGGCGGAGGAGAGTCGACCAAGCTTCAACTCTA
                      ____________________________________________________________
consensus             TGATCACTTGATCATGGCGGAGACAGGCGGCGGAGGAGAGTCGACCAAGCTTCAACTCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           CTCCAACTGGGAGAGCTCTTGCGCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGTCA
                      ____________________________________________________________
consensus             CTCCAACTGGGAGAGCTCTTGCGCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           AGGACTGGATTACGAGTACAAAGCGGTTAACCTGCTCAAAGCCGAACATTTCAGCCCTGA
                      ____________________________________________________________
consensus             AGGACTGGATTACGAGTACAAAGCGGTTAACCTGCTCAAAGCCGAACATTTCAGCCCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           ATTTTTGAAGCTCAATCCCATGGGGTATGTGCCGGCATTGGTTGATGGAGACATTGTTAT
                      ____________________________________________________________
consensus             ATTTTTGAAGCTCAATCCCATGGGGTATGTGCCGGCATTGGTTGATGGAGACATTGTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           TTCAGACTCTTTTGCTATTTTGATGGTGAGATTTCGCCTTTACGCTAGTGTGGTGTTAAG
                      ____________________________________________________________
consensus             TTCAGACTCTTTTGCTATTTTGATGGTGAGATTTCGCCTTTACGCTAGTGTGGTGTTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           TTTGGTATTCTATACGGAATAACTTGTAAGTAATCATAATGTGCAGTATTTGGAAGAAAA
rJMSF042G07+                                                       GTATTTGGAAGAAAA
                      ____________________________________________________________
consensus             TTTGGTATTCTATACGGAATAACTTGTAAGTAATCATAATGTGCAGTATTTGGAAGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           GTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTATTAATTTTCAGGC
rJMSF042G07+          GTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTATTAATTTTCAGGC
                      ____________________________________________________________
consensus             GTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTATTAATTTTCAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           TGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGTTATTCTTAAATATAT
rJMSF042G07+          TGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGTTATTCTTAAATATAT
                      ____________________________________________________________
consensus             TGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGTTATTCTTAAATATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           TGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGGGCCTGACTCATATAAAAAAAGG
rJMSF042G07+          TGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGGGCCTGACTCATATAAAAAAAGG
                      ____________________________________________________________
consensus             TGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGGGCCTGACTCATATAAAAAAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G07-           CTTTGCTG                                                    
rJMSF042G07+          CTTTGCTGGTAAAAGCTTTGTTCCTATTGGCTTTCTTGAAATCCTGTTAAGTGTGACTGA
                      ____________________________________________________________
consensus             CTTTGCTGGTAAAAGCTTTGTTCCTATTGGCTTTCTTGAAATCCTGTTAAGTGTGACTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042G07+          AGTGCTCCATTGCACTTGGTCTTTCATTTCTGATATTGGGTTTTTGTGATTTTACTCCTG
                      ____________________________________________________________
consensus             AGTGCTCCATTGCACTTGGTCTTTCATTTCTGATATTGGGTTTTTGTGATTTTACTCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042G07+          ATGCCAATTTTGCAGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGCCACTG
                      ____________________________________________________________
consensus             ATGCCAATTTTGCAGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGCCACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042G07+          GTGATCAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATCGAGCAATCAACA
                      ____________________________________________________________
consensus             GTGATCAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATCGAGCAATCAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042G07+          GTTTCAATTTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGTGTACAAAG
                      ____________________________________________________________
consensus             GTTTCAATTTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGTGTACAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042G07+          AGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGAGGCAA
                      ____________________________________________________________
consensus             AGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGAGGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042G07+          GAGCTTGAGGTGATTTATCAATGAAGGAAACTAAAGAGAGAATCTATTCTACAATGAAAA
                      ____________________________________________________________
consensus             GAGCTTGAGGTGATTTATCAATGAAGGAAACTAAAGAGAGAATCTATTCTACAATGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042G07+          CTGGAGTGGAAGCCCTTTTTTCTTATTCTCAATTTCTGTATACAACACTAACACAACACA
                      ____________________________________________________________
consensus             CTGGAGTGGAAGCCCTTTTTTCTTATTCTCAATTTCTGTATACAACACTAACACAACACA