Contig 008617:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007A10Sequence206008617 (9)ref|XP_009786978.1|1e-21PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X2 [N759008617 (9)ref|XP_009587197.1|3e-124PREDICTED: ABC transporter I family member 10, chloroplastic [Nicotiana tomento
JMSF013E07Sequence326008617 (9)ref|XP_009786978.1|7e-31PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X2 [N747008617 (9)ref|XP_006340151.1|2e-122PREDICTED: ABC transporter I family member 10, chloroplastic-like [Solanum tube
JMSF022B01Sequence666007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto716008617 (9)ref|XP_009587197.1|5e-119PREDICTED: ABC transporter I family member 10, chloroplastic [Nicotiana tomento
JMSF041B10Sequence760008617 (9)ref|XP_009786977.1|2e-115PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X1 [N729008617 (9)ref|XP_002280615.1|4e-89PREDICTED: ABC transporter I family member 10, chloroplastic [Vitis vinifera]
JMSF049G14Sequence678008617 (9)ref|XP_009786978.1|6e-97PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X2 [N763008617 (9)ref|XP_004251120.1|3e-124PREDICTED: ABC transporter I family member 10, chloroplastic isoform X2 [Solanu

Alignment

This contig is upended


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JMSF013E07-                                              GAAATGTTGGGTCAATTGTGAAATT
JMSF049G14-                                                      GGGTCAATTGTGAAATT
JMSF041B10-                                                      GGGTCAATTGTGAAATT
                      ____________________________________________________________
consensus                                                GAAATGTTGGGTCAATTGTGAAATT
 
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JMSF013E07-           AGCAGCGTATGTGGAGAGGGGAATCCGATAAAAATGGTGAATAAGCAATTTTGAGGCAGC
JMSF007A10-                                                                     GC
JMSF049G14-           AGCAGCGTATGTGGAGAGGGGAATCCGATAAAAATGGTGAATAAGCAATTTTGAGGCAGC
JMSF041B10-           AGCAGCGTATGTGGAGAGGGGAATCCGATAAAAATGGTGAATAAGCAATTTTGAGGCAGC
                      ____________________________________________________________
consensus             AGCAGCGTATGTGGAGAGGGGAATCCGATAAAAATGGTGAATAAGCAATTTTGAGGCAGC
 
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JMSF013E07-           AGGGCAGGTTGAAGCACAATGATCCAATCGGCTTGTATCCGGGCCTCTGCATTCCACCTC
JMSF007A10-           AGGGCAGGTTGAAGCACAATGATCCAATCGGCTTGTATCCGGGCCTCTGCATTCCACCTC
JMSF049G14-           AGGGCAGGTTGAAGCACAATGATCCAATCGGCTTGTATCCGGGCCTCTGCATTCCACCTC
JMSF041B10-           AGGGCAGGTTGAAGCACAATGATCCAATCGGCTTGTATCCGGGCCTCTGCATTCCACCTC
                      ____________________________________________________________
consensus             AGGGCAGGTTGAAGCACAATGATCCAATCGGCTTGTATCCGGGCCTCTGCATTCCACCTC
 
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JMSF013E07-           CCACCTCTCTTCTCTCACTCCACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
JMSF007A10-           CCACCTCTCTTCTCTCACTCCACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
JMSF049G14-           CCACCTCTCTTCTCTCACTCCACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
JMSF041B10-           CCACCTCTCTTCTCTCACTCCACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
rJMSF022B01+                          ACTCCACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
rJMSF007A10+                         CACTCCACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
rJMSF049G14+                              CACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
rJMSF013E07+                                                         CTGTGCAATTGAA
                      ____________________________________________________________
consensus             CCACCTCTCTTCTCTCACTCCACAAGGCATTCCGCAACCGGCGAGAGCTGTGCAATTGAA
 
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JMSF013E07-           GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
JMSF007A10-           GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
JMSF049G14-           GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
JMSF041B10-           GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
rJMSF022B01+          GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
rJMSF007A10+          GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
rJMSF049G14+          GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
rJMSF013E07+          GCTAGCCATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
                      ____________________________________________________________
consensus             GCTAGCAATCTGAGCTATTCGGTTGTCACGAATCAGGGTAAACACCTCCCAATTCTAAAG
 
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JMSF013E07-           GACTGTTCTCTCAGCGTTCCCTCTGGCCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
JMSF007A10-           GACTGTTCTCTCAGCGTTCCCT                                      
JMSF049G14-           GACTGTTCTCTCAGCGTTCCCTCTGGCCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
JMSF041B10-           GACTGTTCTCTCAGCGTTCCCTCTGGCCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
rJMSF022B01+          GACTGTTCTCTCAGCGTTCCCTCTGGCCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
rJMSF007A10+          GACTGTTCTCTCAGCGTTCCCTCTGACCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
rJMSF049G14+          GACTGTTCTCTCAGCGTTCCCTCTGGCCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
rJMSF013E07+          GACTGTTCTCTCAGCGTTCCCTCTGGCCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
                      ____________________________________________________________
consensus             GACTGTTCTCTCAGCGTTCCCTCTGGCCAGTTATGGATGCTTCTTGGACCCAATGGCTCA
 
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JMSF013E07-           G                                                           
JMSF049G14-           GGAAAATCCACTCTTTTGAAAATTTTGGCAGGGCTTTTGTGCCCCAACAGTGGGTCTTTT
JMSF041B10-           GGAAAATCCACTCTTTTGAAAATTTTGGCAGGGCTTTTGTGCCCCAACAGTGGGTCTTTT
rJMSF022B01+          GGAAAATCCACTCTTTTGAAAATTTTGGCAGGGCTTTTGTGCCCCAACAGTGGGTCTTTT
rJMSF007A10+          GGAAAATCCACTCTTTTGAAAATTTTGGCAGGGCTTTTGTGCCCCAACAGTGGGTCTTTT
rJMSF049G14+          GGAAAATCCACTCTTTTGAAAATTTTGGCAGGGCTTTTGTGCCCCAACAGTGGGTCTTTT
rJMSF013E07+          GGAAAATCCACTCTTTTGAAAATTTTGGCAGGGCTTTTGTGCCCCAACAGTGGGTCTTTT
rJMSF041B10+                                                   CCCCAACAGTGGGTCTTTT
                      ____________________________________________________________
consensus             GGAAAATCCACTCTTTTGAAAATTTTGGCAGGGCTTTTGTGCCCCAACAGTGGGTCTTTT
 
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JMSF049G14-           TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
JMSF041B10-           TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
rJMSF022B01+          TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
rJMSF007A10+          TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
rJMSF049G14+          TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
rJMSF013E07+          TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
rJMSF041B10+          TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
                      ____________________________________________________________
consensus             TATGTGAAGAAACCAAAGAGTTTTGTATATCAAAATCCAGACCACCAGGTGGTGATGCCT
 
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JMSF049G14-           ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
JMSF041B10-           ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
rJMSF022B01+          ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
rJMSF007A10+          ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
rJMSF049G14+          ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
rJMSF013E07+          ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
rJMSF041B10+          ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
                      ____________________________________________________________
consensus             ACGGTGGAAGCTGATGTGGCTTTTGGCCTAGGAAAATTCAACTTAACCATGGATGAGATC
 
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JMSF049G14-           AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
JMSF041B10-           AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
rJMSF022B01+          AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
rJMSF007A10+          AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
rJMSF049G14+          AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
rJMSF013E07+          AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
rJMSF041B10+          AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
                      ____________________________________________________________
consensus             AGGCCTAGAGTGGCAAAAGCTCTGGATACTGTTGGCATGTACGAGTATCTGCAAAAACCA
 
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JMSF049G14-           GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
JMSF041B10-           GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
rJMSF022B01+          GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
rJMSF007A10+          GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
rJMSF049G14+          GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
rJMSF013E07+          GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
rJMSF041B10+          GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
                      ____________________________________________________________
consensus             GTTCACACTCTTAGTGGAGGTCAGAAACAAAGGGTTGCTACCGCTGGTGCTTTGGCTGAG
 
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JMSF049G14-           TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGAT 
JMSF041B10-           TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGATT
rJMSF022B01+          TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGATT
rJMSF007A10+          TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGATT
rJMSF049G14+          TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGATT
rJMSF013E07+          TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGATT
rJMSF041B10+          TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGATT
                      ____________________________________________________________
consensus             TCATGCAAAGTGTTGTTGTTAGATGAACTGACTACATTCTTGGATGAAAATGACCAGATT
 
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JMSF041B10-           GGGGTGATAAAAGCACTGAAGAACTCTATAGATGCATCTAACGAAATTACAGCGTTGTGG
rJMSF022B01+          GGGGTGATAAAAGCACTGAAGAACTCTATAGATGCATCTAACGAAATTACAGCGTTGTGG
rJMSF007A10+          GGGGTGATAAAAGCACTGAAGAACTCTATAGATGCATCTAACGAAATTACAGCGTTGTGG
rJMSF049G14+          GGGGTGATAAAAGCACTGAAGAACTCTATAGATGCATCTAACGAAATTACAGCGTTGTGG
rJMSF013E07+          GGGGTGATAAAAGCACTGAAGAACTCTATAGATGCATCTAACGAAATTACAGCGTTGTGG
rJMSF041B10+          GGGGTGATAAAAGCACTGAAGAACTCTATAGATGCATCTAACGAAATTACAGCGTTGTGG
                      ____________________________________________________________
consensus             GGGGTGATAAAAGCACTGAAGAACTCTATAGATGCATCTAACGAAATTACAGCGTTGTGG
 
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JMSF041B10-           GTGACCCATCGTCTGGAAGAA                                       
rJMSF022B01+          GTGACCCATCGTCTAGAAGAACTTGAGTATGCAGATGGCGCTATTTACATGGAAGATGGT
rJMSF007A10+          GTGACCCATCGTCTGGAAGAACTTGAGTATGCAGATGGCGCTATTTACATGGAAGATGGT
rJMSF049G14+          GTGACCCATCGTCTGGAAGAACTTGAGTATGCAGATGGCGCTATTTACATGGAAGATGGT
rJMSF013E07+          GTGACCCATCGTCTGGAAGAACTTGAGTATGCAGATGGCGCTATTTACATGGAAGATGGT
rJMSF041B10+          GTGACCCATCGTCTGGAAGAACTTGAGTATGCAGATGGCGCTATTTACATGGAAGATGGT
                      ____________________________________________________________
consensus             GTGACCCATCGTCTGGAAGAACTTGAGTATGCAGATGGCGCTATTTACATGGAAGATGGT
 
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rJMSF022B01+          AGAATTATTATGCAAAGTGATGCATCCATTGTGTATAATTTTAT                
rJMSF007A10+          AGAATTATTATGCAAAGTGATGCATCCATTGTGTATAATTTTATTGAAGCTAGGAGGGCT
rJMSF049G14+          AGAATTATTATGCAAAGTGATGCATCCATTGTGTATAATTTTATTGAAGCTAGGAGGGCT
rJMSF013E07+          AGAATTATTATGCAAAGTGATGCATCCATTGTGTATAATTTTATTGAAGCTAGGAGGGCT
rJMSF041B10+          AGAATTATTATGCAAAGTGATGCATCCATTGTGTATAATTTTATTGAAGCTAGGAGGGCT
                      ____________________________________________________________
consensus             AGAATTATTATGCAAAGTGATGCATCCATTGTGTATAATTTTATTGAAGCTAGGAGGGCT
 
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rJMSF007A10+          TCTTATCTCGACCAAATTAATCTATGATTATTTGCTTCCTATACTAAGCACATT      
rJMSF049G14+          TCTTATCTCGACCAAATTAATCTATGATTATTTGCTTCCTATACTAAGCACATTTGTACC
rJMSF013E07+          TCTTATCTCGACCAAATTAATCTATGATTATTTGCTTCCTATACTAAGCACATTTGTACC
rJMSF041B10+          TCTTATCTCGACCAAATTAATCTATGATTATTTGCTTCCTATACTAAGCACATTTGTACC
                      ____________________________________________________________
consensus             TCTTATCTCGACCAAATTAATCTATGATTATTTGCTTCCTATACTAAGCACATTTGTACC
 
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rJMSF049G14+          TTT                                                         
rJMSF013E07+          TTTGTGTCTAATCT                                              
rJMSF041B10+          TTTGTGTCTAATCTTGTATAGTAGAACTGTTTTTGATGAATCCAAATGTTGTCTCTCTCT
                      ____________________________________________________________
consensus             TTTGTGTCTAATCTTGTATAGTAGAACTGTTTTTGATGAATCCAAATGTTGTCTCTCTCT
 
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rJMSF041B10+          CTCTCTCTCTCTGTCTTCTTTGGTGGTAGTTGACATTCCTATAGTTTATAGGGGTACTAT
                      ____________________________________________________________
consensus             CTCTCTCTCTCTGTCTTCTTTGGTGGTAGTTGACATTCCTATAGTTTATAGGGGTACTAT