Contig 008616:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF040P01Sequence664008616 (2)895008616 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040P01- GAGGTCCCCTCCAGCAGCCCCCTCTCCTCCTTTTTTCTCTCGAC
                      ____________________________________________________________
consensus GAGGTCCCCTCCAGCAGCCCCCTCTCCTCCTTTTTTCTCTCGAC
 
. : . : . : . : . : . :
JMSF040P01- TCTCGGTGTCTATCTCTCGTCAAGCAGCAGATCAGCGGTGACATGGTGGAGTTTCGTGAG
                      ____________________________________________________________
consensus TCTCGGTGTCTATCTCTCGTCAAGCAGCAGATCAGCGGTGACATGGTGGAGTTTCGTGAG
 
. : . : . : . : . : . :
JMSF040P01- CTCTGGCGACGGCGGCGAGGGGTCAGGATAGCGGCTCCTTCGGCGAGCTGTGGCTACGGC
                      ____________________________________________________________
consensus CTCTGGCGACGGCGGCGAGGGGTCAGGATAGCGGCTCCTTCGGCGAGCTGTGGCTACGGC
 
. : . : . : . : . : . :
JMSF040P01- AGTGAGCAGACAAGGCAACTCTCCTTTCACGCGACGAACGAGTAGCAGCGAACCACTCTT
                      ____________________________________________________________
consensus AGTGAGCAGACAAGGCAACTCTCCTTTCACGCGACGAACGAGTAGCAGCGAACCACTCTT
 
. : . : . : . : . : . :
JMSF040P01- GCGACCTCTGCAAAGTGATCGTCGTCCTCATATTGATGATCGGTCAAAATCTGTGAAGGT
rJMSF040P01+ CTCTGCAAAGTGATCGTCGTCCTCATATTGATGATCGGTCAAAATCTGTGAAGGT
                      ____________________________________________________________
consensus GCGACCTCTGCAAAGTGATCGTCGTCCTCATATTGATGATCGGTCAAAATCTGTGAAGGT
 
. : . : . : . : . : . :
JMSF040P01- TCTTCGTCGTTGATGGAAACCATCGCTGCGGCCGGGATGCTGC-TTCACTGTCAGCACAG
rJMSF040P01+ TTTTCGTCGTTGATGGAAACCATCGCTGCGGCCGGGATGCTGCTTTCACTGTCAGCACAG
                      ____________________________________________________________
consensus TTTTCGTCGTTGATGGAAACCATCGCTGCGGCCGGGATGCTGCTTTCACTGTCAGCACAG
 
. : . : . : . : . : . :
JMSF040P01- AAGATCTGCGGTGGTGAATGTGTTGTGGATACCTGACCGGAGCCTCCTGAATCGACCGAA
rJMSF040P01+ AAGATCTGCGGTGGTGAATGTGTTGTGGATACCTGACCGGAGCCTCCTGAATCGACCGAA
                      ____________________________________________________________
consensus AAGATCTGCGGTGGTGAATGTGTTGTGGATACCTGACCGGAGCCTCCTGAATCGACCGAA
 
. : . : . : . : . : . :
JMSF040P01- CAAATTGTGCAAAAATTCTTAGATCGATGATTTACGTCGCGGAGGGTTCTCTTCCCCCTA
rJMSF040P01+ CAAATTGTGCAAAAATTCTTAGATCGATGATTTACGTCGCGGAGGGTTCTCTTCCCCCTA
                      ____________________________________________________________
consensus CAAATTGTGCAAAAATTCTTAGATCGATGATTTACGTCGCGGAGGGTTCTCTTCCCCCTA
 
. : . : . : . : . : . :
JMSF040P01- CGCCGGTGATTTCACGCTTGGAGAAAGGAGGAAGATCGATAGAAATAGGGGAGACTGAGC
rJMSF040P01+ CGCCGGTGATTTCACGCTTGGAGAAAGGAGGAAGATCGATAGAAATAGGGGAGACTGAGC
                      ____________________________________________________________
consensus CGCCGGTGATTTCACGCTTGGAGAAAGGAGGAAGATCGATAGAAATAGGGGAGACTGAGC
 
. : . : . : . : . : . :
JMSF040P01- TGCTGTTGCTGGACTCCGCCACAACGCTTGAAGGAATCTCGTTGCCTGGAAGAAAGAGTC
rJMSF040P01+ TGCTGTTGCTGGACTCCGCCACAACGCTTGAAGGAATCTCGTTGCCTGGAAGAAAGAGTC
                      ____________________________________________________________
consensus TGCTGTTGCTGGACTCCGCCACAACGCTTGAAGGAATCTCGTTGCCTGGAAGAAAGAGTC
 
. : . : . : . : . : . :
JMSF040P01- GTCGGAGCTGCTGTTGTTGGACTCCGCCACGACGCTTGAAGGAATCTCGTTGCCTGGAAG
rJMSF040P01+ GTCGGAGCTGCTGTTGTTGGACTCCGCCACGACGCTTGAAGGAATCTCGTTGCCTGGAAG
                      ____________________________________________________________
consensus GTCGGAGCTGCTGTTGTTGGACTCCGCCACGACGCTTGAAGGAATCTCGTTGCCTGGAAG
 
. : . : . : . : . : . :
JMSF040P01- AAAGAGTCGTCGGAGCTGCTG
rJMSF040P01+ AAAGAGTCGTCGGAGCTGCTGGCTGACGTCTCCGTTGCTTCACCGGAGCTCCTCCAAGAT
                      ____________________________________________________________
consensus AAAGAGTCGTCGGAGCTGCTGGCTGACGTCTCCGTTGCTTCACCGGAGCTCCTCCAAGAT
 
. : . : . : . : . : . :
rJMSF040P01+ TGCCGCCGCGATAGGAAGCGAGAGAGAGAGAGAGAGTTGGCACTGCTCTGTTCGTCGTTA
                      ____________________________________________________________
consensus TGCCGCCGCGATAGGAAGCGAGAGAGAGAGAGAGAGTTGGCACTGCTCTGTTCGTCGTTA
 
. : . : . : . : . : . :
rJMSF040P01+ GAGATGTCTACTCGTGCCGAAAAGAACTGTCGAGGTGAGAAGCTGAAAGAAAGTTTCGTT
                      ____________________________________________________________
consensus GAGATGTCTACTCGTGCCGAAAAGAACTGTCGAGGTGAGAAGCTGAAAGAAAGTTTCGTT
 
. : . : . : . : . : . :
rJMSF040P01+ GTTGGTTGTCGATGATGGGTGATGTTGGCTGCTGTCCGTCTAAGAGAGGGGACTGAGAAC
                      ____________________________________________________________
consensus GTTGGTTGTCGATGATGGGTGATGTTGGCTGCTGTCCGTCTAAGAGAGGGGACTGAGAAC
 
. : . : . : . : . : . :
rJMSF040P01+ GGAAGAGGTTGGTGTGTAACCAAAGCTATTGCGAAATTACCAAATTGTCCATGGTTTTAA
                      ____________________________________________________________
consensus GGAAGAGGTTGGTGTGTAACCAAAGCTATTGCGAAATTACCAAATTGTCCATGGTTTTAA
 
. : . : . : . : . : . :
rJMSF040P01+ CAATATTACTAACAAATTTGATCGCAGAGTTACATTGACTGTAATTGAAACATTTGAGGG
                      ____________________________________________________________
consensus CAATATTACTAACAAATTTGATCGCAGAGTTACATTGACTGTAATTGAAACATTTGAGGG
 
. : . : . : . : . : . :
rJMSF040P01+ ACTAATTTAGCAAAAATTGACAATAAGGGACTACATTGCATATTTGGAAACAATTGAGGG
                      ____________________________________________________________
consensus ACTAATTTAGCAAAAATTGACAATAAGGGACTACATTGCATATTTGGAAACAATTGAGGG
 
. : . : . : . : . : . :
rJMSF040P01+ ACCAAAAGTGCAATTTTCCCTATTTATAATAATATATTTGTAACATTGATTTATTAAAAA
                      ____________________________________________________________
consensus ACCAAAAGTGCAATTTTCCCTATTTATAATAATATATTTGTAACATTGATTTATTAAAAA