Contig 008615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF040O09Sequence655005792 (3)ref|XP_002464838.1|2e-13hypothetical protein SORBIDRAFT_01g027418 [Sorghum bicolor] gb|EER91836.1| hypot902008615 (2)ref|XP_009592280.1|238PREDICTED: uncharacterized protein LOC104089148 [Nicotiana tomentosiformis]
JMSF048N19Sequence662014773ref|XP_011079009.1|164PREDICTED: uncharacterized protein LOC105162629 [Sesamum indicum]665008615 (2)ref|XP_009592280.1|208PREDICTED: uncharacterized protein LOC104089148 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF040O09+                                                                    TT
                      ____________________________________________________________
consensus                                                                       TT
 
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rJMSF040O09+          GATGTTTATGTTACTCCTGATATGAATACAGATGGTACTGGTCGAATTGGAGTACAGTTA
                      ____________________________________________________________
consensus             GATGTTTATGTTACTCCTGATATGAATACAGATGGTACTGGTCGAATTGGAGTACAGTTA
 
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rJMSF048N19+                                                                    TT
rJMSF040O09+          ANCCCCGAACTATAAGCTTTCCAAGGTTAGCCCTAGGAATATATTTGAAGTTTTCAGCTT
                      ____________________________________________________________
consensus             ANCCCCGAACTATAAGCTTTCCAAGGTTAGCCCTAGGAATATATTTGAAGTTTTCAGCTT
 
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rJMSF048N19+          CTCGGGGCGTGAGTTTTGGGGACTCACATATAATGTGTTGGACAGCTTGAAACAGACGTT
rJMSF040O09+          CTCGGGGCGTGAGTTTTGGGGACTCACATATAATGTGTTGGACAGCTTGAAACAGACGTT
                      ____________________________________________________________
consensus             CTCGGGGCGTGAGTTTTGGGGACTCACATATAATGTGTTGGACAGCTTGAAACAGACGTT
 
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rJMSF048N19+          TTTAAACTTCTCTCAAACTGCTAGCAAGGTTTCTGGTCCGGTTGCTATTATTGCTGTTGG
rJMSF040O09+          TTTAAACTTCTCTCAAACTGCTAGCAAGGTTTCTGGTCCGGTTGCTATTATTGCTGTTGG
                      ____________________________________________________________
consensus             TTTAAACTTCTCTCAAACTGCTAGCAAGGTTTCTGGTCCGGTTGCTATTATTGCTGTTGG
 
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rJMSF048N19+          TGCTGAGGTTGCAAAGTCAAATATAGATGGTCTATACCAATTTGCTGCGCTTTTGAACCT
rJMSF040O09+          TGCTGAGGTTGCAAAGTCAAATATAGATGGTCTATACCAATTTGCTGCGCTTTTGAACCT
                      ____________________________________________________________
consensus             TGCTGAGGTTGCAAAGTCAAATATAGATGGTCTATACCAATTTGCTGCGCTTTTGAACCT
 
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rJMSF048N19+          TAACCTTGCAGTGATAAACCTTCTTCCTTTGCCTGCTTTGGATGGGGGTTCATTGGCTTT
rJMSF040O09+          TAACCTTGCAGTGATAAACCTTCTTCCTTTGCCTGCTTTGGATGGGGGTTCATTGGCTTT
                      ____________________________________________________________
consensus             TAACCTTGCAGTGATAAACCTTCTTCCTTTGCCTGCTTTGGATGGGGGTTCATTGGCTTT
 
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rJMSF048N19+          GATTCTCATAGAAGCAGCTAGGGGTGGGCGGAAGCTTCCTTTAGAATTAGAGCAGCGGAT
rJMSF040O09+          GATTCTCATAGAAGCAGCTAGGGGTGGGCGGAAGCTTCCTTTAGAATTAGAGCAGCGGAT
                      ____________________________________________________________
consensus             GATTCTCATAGAAGCAGCTAGGGGTGGGCGGAAGCTTCCTTTAGAATTAGAGCAGCGGAT
 
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rJMSF048N19+          TATGTCATCTGGAATCATGTTTGTCATAATTCTTGGACTATTCCTTCTTGTTCGGGACAC
rJMSF040O09+          TATGTCATCTGGAATCATGTTTGTCATAATTCTTGGACTATTCCTTCTTGTTCGGGACAC
                      ____________________________________________________________
consensus             TATGTCATCTGGAATCATGTTTGTCATAATTCTTGGACTATTCCTTCTTGTTCGGGACAC
 
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rJMSF048N19+          ACTAAATCTCGACTTCATCAAGGATTTATTGTAATGATTCAGCAAAATGTTTCCCGGCTA
rJMSF040O09+          ACTAAATCTCGACTTCATCAAGGATTTATTGTAATGATTCAGCAAAATGTTTCCCGGCTA
                      ____________________________________________________________
consensus             ACTAAATCTCGACTTCATCAAGGATTTATTGTAATGATTCAGCAAAATGTTTCCCGGCTA
 
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rJMSF048N19+          GGAAACCATCTGATTGTAAATGCGACAATGCCTCAAAGGCAAAAGAGTTGCCTATGGTTA
rJMSF040O09+          GGAAACCATCTGATTGTAAATGCGACAATGCCTCAAAGGCAAAAGAGTTGCCTATGGTTA
                      ____________________________________________________________
consensus             GGAAACCATCTGATTGTAAATGCGACAATGCCTCAAAGGCAAAAGAGTTGCCTATGGTTA
 
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rJMSF048N19+          GTTGATTTAAACTTGTCGTCTCCTAAATATTCAATGGCAGGAAGCTCTTGACCTCATCTC
rJMSF040O09+          GTTGATTTAAACTTGTCGTCTCCTAAATATTCAATGGCAGGAAGCTCTTGACCTCATCTC
                      ____________________________________________________________
consensus             GTTGATTTAAACTTGTCGTCTCCTAAATATTCAATGGCAGGAAGCTCTTGACCTCATCTC
 
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rJMSF048N19+          GTCCTTGATAGTGATCCAAGTTTAAAGTGTACTAGTAGTTTGCTGCACTAAACGTGGAGA
rJMSF040O09+          GTCCTTGATAGTGATCCAAGTTTAAAGTGTACTAGTAGTTTGCTGCACTAAACGTGGAGA
                      ____________________________________________________________
consensus             GTCCTTGATAGTGATCCAAGTTTAAAGTGTACTAGTAGTTTGCTGCACTAAACGTGGAGA
 
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rJMSF048N19+          ATTGAGCTAGGTATCCACCATATGATACTTTACCTGCATATTTGTACCATTAAAACCCGT
rJMSF040O09+          ATTGAGCTAGGTATCCACCATATGATACTTTACCTGCATATTTGTACCATTAAAACCCGT
                      ____________________________________________________________
consensus             ATTGAGCTAGGTATCCACCATATGATACTTTACCTGCATATTTGTACCATTAAAACCCGT
 
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rJMSF040O09+          TACATTTACATTTTTATGGATCACATTGAGTCTGAATACTTGGAATAGATTGTTCCTCTC
                      ____________________________________________________________
consensus             TACATTTACATTTTTATGGATCACATTGAGTCTGAATACTTGGAATAGATTGTTCCTCTC
 
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rJMSF040O09+          AAATCTTTTGATAATTGTCTCCATGGGTGTCTATCTGTTGACCTAAAANCCTGGCATGTT
                      ____________________________________________________________
consensus             AAATCTTTTGATAATTGTCTCCATGGGTGTCTATCTGTTGACCTAAAANCCTGGCATGTT