Contig 008607:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030J01Sequence485007409 (4)ref|XP_004234514.1|2e-36PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum681008607 (3)ref|XP_004234514.1|2e-62PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum
JMFF038C05Sequence504007409 (4)ref|XP_004234514.1|2e-33PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum764008607 (3)ref|XP_004234514.1|4e-78PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum
JMSF039I05Sequence714007409 (4)ref|XP_004234514.1|3e-44PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum783008607 (3)ref|XP_002521706.1|3e-35plant ubiquilin, putative [Ricinus communis] gb|EEF40693.1| plant ubiquilin, put

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039I05+ ATT
                      ____________________________________________________________
consensus ATT
 
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rJMSF039I05+ TGCGCACCGCTTTTGCAACATAAACATNCAAAGATTCCATGTATAAGTTAAGGGCATAAT
                      ____________________________________________________________
consensus TGCGCACCGCTTTTGCAACATAAACATNCAAAGATTCCATGTATAAGTTAAGGGCATAAT
 
. : . : . : . : . : . :
rJMSF039I05+ ATAAAGGACAAATTTATGGGTTTGATAGACAATCTTTGTATTAGAACTTATGCTCATAGT
                      ____________________________________________________________
consensus ATAAAGGACAAATTTATGGGTTTGATAGACAATCTTTGTATTAGAACTTATGCTCATAGT
 
. : . : . : . : . : . :
rJMSF039I05+ TTTTTTTTTGTTTTTTATTTTTATTTTTTAAGGTGTGTTACTGGTTTTGTATTCTCTTCT
                      ____________________________________________________________
consensus TTTTTTTTTGTTTTTTATTTTTATTTTTTAAGGTGTGTTACTGGTTTTGTATTCTCTTCT
 
. : . : . : . : . : . :
rJMFF030J01+ GCAACTCATGA
rJMFF038C05+ GCAACTCATGA
rJMSF039I05+ TGTCTTTGTTTCTCATTTTTTCCCTAATTCACTTCCTGTGTACCTTTCAGCAACTCATGA
                      ____________________________________________________________
consensus TGTCTTTGTTTCTCATTTTTTCCCTAATTCACTTCCTGTGTACCTTTCAGCAACTCATGA
 
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rJMFF030J01+ ATTTTCAGCAATCACTCAGTTCACAACTTGGTAGACAGCAGACTAATCGAGAACTAGGTC
rJMFF038C05+ ATTTTCAGCAATCACTCAGTTCACAACTTGGTAGACAGCAGACTAATCGAGAACTAGGTC
rJMSF039I05+ ATTTTCAGCAATCACTCAGTTCACAACTTGGTAGACAGCAGACTAATCGAGAACTAGGTC
                      ____________________________________________________________
consensus ATTTTCAGCAATCACTCAGTTCACAACTTGGTAGACAGCAGACTAATCGAGAACTAGGTC
 
. : . : . : . : . : . :
rJMFF030J01+ AAAATGGTGGAGCAGCAGGGTCGCTTGACAATATAGGATTAGAAATGCTGATGAATATGT
rJMFF038C05+ AAAATGGTGGAGCAGCAGGGTCGCTTGACAATATAGGATTAGAAATGCTGATGAATATGT
rJMSF039I05+ AAAATGGTGGAGCAGCAGGGTCGCTTGACAATATAGGATTAGAAATGCTGATGAATATGT
                      ____________________________________________________________
consensus AAAATGGTGGAGCAGCAGGGTCGCTTGACAATATAGGATTAGAAATGCTGATGAATATGT
 
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rJMFF030J01+ TTGGTGGACTTGGAACCGGGGGTTTTGGAGTTCCCAACCAACCCAATGTGCCACCTGAGG
rJMFF038C05+ TTGGTGGACTTGGAACCGGGGGTTTTGGAGTTCCCAACCAACCCAATGTGCCACCTGAGG
rJMSF039I05+ TTGGTGGACTTGGAACCGGGGGTTTTGGAGTTCCCAACCAACCCAATGTGCCACCTGAGG
                      ____________________________________________________________
consensus TTGGTGGACTTGGAACCGGGGGTTTTGGAGTTCCCAACCAACCCAATGTGCCACCTGAGG
 
. : . : . : . : . : . :
rJMFF030J01+ AACTATACGCCACTCAGCTTACACAGCTTCAGGAAATGGGTTTCTTTGATACACAAGAAA
rJMFF038C05+ AACTATACGCCACTCAGCTTACACAGCTTCAGGAAATGGGTTTCTTTGATACACAAGAAA
rJMSF039I05+ AACTATACGCCACTCAGCTTACACAGCTTCAGGAAATGGGTTTCTTTGATACACAAGAAA
                      ____________________________________________________________
consensus AACTATACGCCACTCAGCTTACACAGCTTCAGGAAATGGGTTTCTTTGATACACAAGAAA
 
. : . : . : . : . : . :
rJMFF030J01+ ACATAAGGGCACTGGTAGCCACTGCTGGGAATGTCCATGCTGCCGTGGAACGTCTTCTAG
rJMFF038C05+ ACATAAGGGCACTGGTAGCCACTGCTGGGAATGTCCATGCTGCCGTGGAACGTCTTCTAG
rJMSF039I05+ ACATAAGGGCACTGGTAGCCACTGCTGGGAATGTCCATGCTGCCGTGGAACGTCTTCTAG
                      ____________________________________________________________
consensus ACATAAGGGCACTGGTAGCCACTGCTGGGAATGTCCATGCTGCCGTGGAACGTCTTCTAG
 
. : . : . : . : . : . :
rJMFF030J01+ GAAACCCCGGTCAGTAGAATTCTATTCGATGTTACTATATAGCTTCTGTTGGGGACAAGA
rJMFF038C05+ GAAACCCCGGTCAGTAGAATTCTATTCGATGTTACTATATAGCTTCTGTTGGGGACAAGA
rJMSF039I05+ GAAACCCCGGTCAGTAGAATTCTATTCGATGTTACTATATAGCTTCTGTTGGGGACAAGA
                      ____________________________________________________________
consensus GAAACCCCGGTCAGTAGAATTCTATTCGATGTTACTATATAGCTTCTGTTGGGGACAAGA
 
. : . : . : . : . : . :
rJMFF030J01+ TGGAAACCGGCCAACTTGGACAAACCTGCATCAAATCTTTGTTTGGAAATAATTGGATTA
rJMFF038C05+ TGGAAACCGGCCAACTTGGACAAACCTGCATCAAATCTTTGTTTGGAAATAATTGGATTA
rJMSF039I05+ TGGAAACCGGCCAACTTGGACAAACCTGCATCAAATCTTTGTTTGGAAATAATTGGATTA
                      ____________________________________________________________
consensus TGGAAACCGGCCAACTTGGACAAACCTGCATCAAATCTTTGTTTGGAAATAATTGGATTA
 
. : . : . : . : . : . :
rJMFF030J01+ GAGTGATTTTTAAAACTCTTTGGCCTGTCCCCATTCTCTATTTACATAGACCAAACAAAC
rJMFF038C05+ GAGTGATTTTTAAAACTCTTTGGCCTGTCCCCATTCTCTATTTACATAGACCAAACAAAC
rJMSF039I05+ GAGTGATTTTTAAAACTCTTTGGCCTGTCCCCATTCTCTATTTACATAGACCAAACAAAC
                      ____________________________________________________________
consensus GAGTGATTTTTAAAACTCTTTGGCCTGTCCCCATTCTCTATTTACATAGACCAAACAAAC
 
. : . : . : . : . : . :
rJMFF030J01+ AGAAAAAAGAACAAATTCTGGAGTTCCTTGTACATACAATGTTAAGATTCGCCAGCT
rJMFF038C05+ AGAAAAAAGAACAAATTCTGGAGTTCCTTGTACATACAATGTTAAGATTCGCCAGCT
rJMSF039I05+ AGAAAAAAGAACAAATTCTGGAGTTCCTTGTACATACAATGTTAAGATTCGCCAGCTAAG
                      ____________________________________________________________
consensus AGAAAAAAGAACAAATTCTGGAGTTCCTTGTACATACAATGTTAAGATTCGCCAGCTAAG