Contig 008582:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017H13Sequence586011975 (3)ref|XP_009771774.1|3e-24PREDICTED: U-box domain-containing protein 35-like [Nicotiana sylvestris] ref|X741008582 (2)ref|XP_002510995.1|3e-85receptor protein kinase, putative [Ricinus communis] gb|EEF51597.1| receptor pro
JMSF034N11Sequence653011975 (3)ref|XP_009771774.1|6e-45PREDICTED: U-box domain-containing protein 35-like [Nicotiana sylvestris] ref|X724008582 (2)ref|XP_009588521.1|4e-80PREDICTED: U-box domain-containing protein 35-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017H13+ GGAAACGGGCCCCGTTGGAAC
rJMSF034N11+ GAAC
                      ____________________________________________________________
consensus GGAAACGGGCCCCGTTGGAAC
 
. : . : . : . : . : . :
rJMSF017H13+ GGTCTGCTATATAGATCCCGAGTATACAAGGACTGGCTTGATCTCTCCAAAGTCCGATGT
rJMSF034N11+ NGTCTGCTATATAGATCCCGAGTATACAAGGACTGGCTTGATCTCTCCAAAGTCCGATGT
                      ____________________________________________________________
consensus GGTCTGCTATATAGATCCCGAGTATACAAGGACTGGCTTGATCTCTCCAAAGTCCGATGT
 
. : . : . : . : . : . :
rJMSF017H13+ TTATGCACTCGGAATGGTTATTCTGCAGCTGTTGACAGCAAAACAGGCCATCGGACTAAC
rJMSF034N11+ TTATGCACTCGGAATGGTTATTCTGCAGCTGTTGACAGCAAAACAGGCCATCGGACTAAC
                      ____________________________________________________________
consensus TTATGCACTCGGAATGGTTATTCTGCAGCTGTTGACAGCAAAACAGGCCATCGGACTAAC
 
. : . : . : . : . : . :
rJMSF017H13+ ACACATTGTCGAAACTGCTATTGACATTGATACCCTCGAGGAGATACTTGACACCGAGGC
rJMSF034N11+ ACACATTGTCGAAACTGCTATTGACATTGATACCCTCGAGGAGATACTTGACACCGAGGC
                      ____________________________________________________________
consensus ACACATTGTCGAAACTGCTATTGACATTGATACCCTCGAGGAGATACTTGACACCGAGGC
 
. : . : . : . : . : . :
rJMSF017H13+ TGGTAAATGGCCACGAGAAGAGACAAAGGAATTGGCAGTACTAGCTCTAAGATGCACAGA
rJMSF034N11+ TGGTAAATGGCCACGAGAAGAGACAAAGGAATTGGCAGTACTAGCTCTAAGATGCACAGA
                      ____________________________________________________________
consensus TGGTAAATGGCCACGAGAAGAGACAAAGGAATTGGCAGTACTAGCTCTAAGATGCACAGA
 
. : . : . : . : . : . :
rJMSF017H13+ GCTTAAGCGAAAGGATAGACCCGACCTGAAGGATCATATACTCCCGGTTCTCGAGAAGCT
rJMSF034N11+ GCTTAAGCGAAAGGATAGACCCGACCTGAAGGATCATATACTCCCGGTTCTCGAGAAGCT
                      ____________________________________________________________
consensus GCTTAAGCGAAAGGATAGACCCGACCTGAAGGATCATATACTCCCGGTTCTCGAGAAGCT
 
. : . : . : . : . : . :
rJMSF017H13+ GAAAGATGTAGCAAATCAAGCTAAAGAAATGGCATCAATCGCCCCGCCCCCTCCACCTAA
rJMSF034N11+ GAAAGATGTAGCAAATCAAGCTAAAGAAATGGCATCAATCGCCCCGCCCCCTCCACCTAA
                      ____________________________________________________________
consensus GAAAGATGTAGCAAATCAAGCTAAAGAAATGGCATCAATCGCCCCGCCCCCTCCACCTAA
 
. : . : . : . : . : . :
rJMSF017H13+ CTACTTCATGTGCCCCATTCTCAAGGATGTAATGGAGGATCCTTGTGTTGCAGCCGATGG
rJMSF034N11+ CTACTTCATGTGCCCCATTCTCAAGGATGTAATGGAGGATCCTTGTGTTGCAGCCGATGG
                      ____________________________________________________________
consensus CTACTTCATGTGCCCCATTCTCAAGGATGTAATGGAGGATCCTTGTGTTGCAGCCGATGG
 
. : . : . : . : . : . :
rJMSF017H13+ GTATACCTATGACCGGAAGGCGATAGAAAGTTGGCTAAACGAGAACGAGAATTCACCAAT
rJMSF034N11+ GTATACCTATGACCGGAAGGCGATAGAAAGTTGGCTAAACGAGAACGAGAATTCACCAAT
                      ____________________________________________________________
consensus GTATACCTATGACCGGAAGGCGATAGAAAGTTGGCTAAACGAGAACGAGAATTCACCAAT
 
. : . : . : . : . : . :
rJMSF017H13+ GACAAACCTACCATTACCTCACAAGAACCTTCTACCAAACTACACGATTCTTTCTGCAAT
rJMSF034N11+ GACAAACCTACCATTACCTCACAAGAACCTTCTACCAAACTACACGATTCTTTCTGCAAT
                      ____________________________________________________________
consensus GACAAACCTACCATTACCTCACAAGAACCTTCTACCAAACTACACGATTCTTTCTGCAAT
 
. : . : . : . : . : . :
rJMSF017H13+ TACAGTGTGGAAGTCTGGTAAGCAATAACTCAGATCTCTCAGATTGTCTATATAGGTGTC
rJMSF034N11+ TACAGTGTGGAAGTCTGGTAAGCAATAACTCAGATCTCTCAGATTGTCTATATAGGTGTC
                      ____________________________________________________________
consensus TACAGTGTGGAAGTCTGGTAAGCAATAACTCAGATCTCTCAGATTGTCTATATAGGTGTC
 
. : . : . : . : . : . :
rJMSF017H13+ TCTTCTAGTTCTAGATAGTGACTTTTAGGGACTGCTGTGCCTTGCAGACATTTGTTTTTG
rJMSF034N11+ TCTTCTAGTTCTAGATAGTGACTTTTAGGGACTGCTGTGCCTTGCAGACATTTGTTTTTG
                      ____________________________________________________________
consensus TCTTCTAGTTCTAGATAGTGACTTTTAGGGACTGCTGTGCCTTGCAGACATTTGTTTTTG
 
. : . : . : . : . : . :
rJMSF017H13+ CCATTAGATTTTCAGATCCATCAATGTCAAATGCTGATGAACTGTAAAGTTGAC
rJMSF034N11+ CCATTAGATTTTCAGATCCATCAATGTCAAATGCTGATGAACTGTAAAGTTGACCAGATT
                      ____________________________________________________________
consensus CCATTAGATTTTCAGATCCATCAATGTCAAATGCTGATGAACTGTAAAGTTGACCAGATT