Contig 008571:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009O23Sequence287000835 (5)ref|XP_009591171.1|55.8PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]742008571 (3)ref|XP_009611847.1|6e-123PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF015N24Sequence246000835 (5)ref|XP_009591171.1|56.2PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]751008571 (3)ref|XP_009611847.1|8e-125PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF032C20Sequence690000835 (5)ref|XP_009591171.1|254PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]700008571 (3)ref|NP_001266007.1|4e-112Hop-interacting protein THI135 [Solanum lycopersicum] gb|AEW69820.1| Hop-interac

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF015N24+ CCAATTATAGGGGCACGGACACAGCCTCCGAACATGTG
rJMSF009O23+ CGGACACAGCCTCCGAACATGTG
                      ____________________________________________________________
consensus CCAATTATAGGGGCACGGACACAGCCTCCGAACATGTG
 
. : . : . : . : . : . :
rJMSF015N24+ CATCGTGACTGAGTTCATGTCTAGAGGAAGTGTTTACAACTTTTTGCACAAGCTAAGAGG
rJMSF009O23+ CATCGTGACTGAGTTCATGTCTAGAGGAAGTGTTTACAACTTTTTGCACAAGCTAAGAGG
rJMSF032C20+ CTAGAGGAAGTGTTTACAACTTTTTGCACAAGCTAAGAGG
                      ____________________________________________________________
consensus CATCGTGACTGAGTTCATGTCTAGAGGAAGTGTTTACAACTTTTTGCACAAGCTAAGAGG
 
. : . : . : . : . : . :
rJMSF015N24+ TGCTTTTAAGCTTCCTAATCTACTCAAGGTTGCAACTGATGTTTCTAAAGGAATGTACTA
rJMSF009O23+ TGCTTTTAAGCTTCCTAATCTACTCAAGGTTGCAACTGATGTTTCTAAAGGAATGTACTA
rJMSF032C20+ TGCTTTTAAGCTTCCTAATCTACTCAAGGTTGCAACTGATGTTTCTAAAGGAATGTACTA
                      ____________________________________________________________
consensus TGCTTTTAAGCTTCCTAATCTACTCAAGGTTGCAACTGATGTTTCTAAAGGAATGTACTA
 
. : . : . : . : . : . :
rJMSF015N24+ TCTCCACCAAAATAACATAATTCATCGTGACTTGAAGACTGCCAATCTTCTGATGGATGA
rJMSF009O23+ TCTCCACCAAAATAACATAATTCATCGTGACTTGAAGACTGCCAATCTTCTGATGGATGA
rJMSF032C20+ TCTCCACCAAAATAACATAATTCATCGTGACTTGAAGACTGCCAATCTTCTGATGGATGA
                      ____________________________________________________________
consensus TCTCCACCAAAATAACATAATTCATCGTGACTTGAAGACTGCCAATCTTCTGATGGATGA
 
. : . : . : . : . : . :
rJMSF015N24+ GCACGGAGTTGTTAAGGTTGCTGATTTTGGGGTGGCTAGAGTGCAAGCTGTAACCGGAGT
rJMSF009O23+ GCACGGAGTTGTTAAGGTTGCTGATTTTGGGGTGGCTAGAGTGCAAGCTGTAACCGGAGT
rJMSF032C20+ GCACGGAGTTGTTAAGGTTGCTGATTTTGGGGTGGCTAGAGTGCAAGCTGTAACCGGAGT
                      ____________________________________________________________
consensus GCACGGAGTTGTTAAGGTTGCTGATTTTGGGGTGGCTAGAGTGCAAGCTGTAACCGGAGT
 
. : . : . : . : . : . :
rJMSF015N24+ CATGACTGCAGAGACTGGAACATACCGATGGATGGCTCCTGAGGTAATTGAGCATAAACC
rJMSF009O23+ CATGACTGCAGAGACTGGAACATACCGATGGATGGCTCCTGAGGTAATTGAGCATAAACC
rJMSF032C20+ CATGACTGCAGAGACTGGAACATACCGATGGATGGCTCCTGAGGTAATTGAGCATAAACC
                      ____________________________________________________________
consensus CATGACTGCAGAGACTGGAACATACCGATGGATGGCTCCTGAGGTAATTGAGCATAAACC
 
. : . : . : . : . : . :
rJMSF015N24+ ATATAATCACAAGGTTGATGTTTTCAGCTTTGGAATAGTGCTATGGGAACTTCTTACAGG
rJMSF009O23+ ATATAATCACAAGGTTGATGTTTTCAGCTTTGGAATAGTGCTATGGGAACTTCTTACAGG
rJMSF032C20+ ATATAATCACAAGGTTGATGTTTTCAGCTTTGGAATAGTGCTATGGGAACTTCTTACAGG
                      ____________________________________________________________
consensus ATATAATCACAAGGTTGATGTTTTCAGCTTTGGAATAGTGCTATGGGAACTTCTTACAGG
 
. : . : . : . : . : . :
rJMSF015N24+ AGAAATTCCCTATGTCTTCTTAACACCTTTACAAGCTGCAATCGGTGTGGTGCAACAGGG
rJMSF009O23+ AGAAATTCCCTATGTCTTCTTAACACCTTTACAAGCTGCAATCGGTGTGGTGCAACAGGG
rJMSF032C20+ AGAAATTCCCTATGTCTTCTTAACACCTTTACAAGCTGCAATCGGTGTGGTGCAACAGGG
                      ____________________________________________________________
consensus AGAAATTCCCTATGTCTTCTTAACACCTTTACAAGCTGCAATCGGTGTGGTGCAACAGGG
 
. : . : . : . : . : . :
rJMSF015N24+ TCTACGACCTAACATTCCTAAGAACACACATCCAAAACTAGCCGAACTGCTAGAGAATTG
rJMSF009O23+ TCTACGACCTAACATTCCTAAGAACACACATCCAAAACTAGCCGAACTGCTAGAGAATTG
rJMSF032C20+ TCTACGACCTAACATTCCTAAGAACACACATCCAAAACTAGCCGAACTGCTAGAGAATTG
                      ____________________________________________________________
consensus TCTACGACCTAACATTCCTAAGAACACACATCCAAAACTAGCCGAACTGCTAGAGAATTG
 
. : . : . : . : . : . :
rJMSF015N24+ TTGGCACCAAGACCCAACTAAAAGGCCGGAATTCTCAGAAATTTTGGAGATTCTGAAACA
rJMSF009O23+ TTGGCACCAAGACCCAACTAAAAGGCCGGAATTCTCAGAAATTTTGGAGATTCTGAAACA
rJMSF032C20+ TTGGCACCAAGACCCAACTAAAAGGCCGGAATTCTCAGAAATTTTGGAGATTCTGAAACA
                      ____________________________________________________________
consensus TTGGCACCAAGACCCAACTAAAAGGCCGGAATTCTCAGAAATTTTGGAGATTCTGAAACA
 
. : . : . : . : . : . :
rJMSF015N24+ AATTTCCGACGAGGTTGGAGATGACAAGCAAAAGGATACCAAATCAATCCGCGGTTTTTT
rJMSF009O23+ AATTTCCGACGAGGTTGGAGATGACAAGCAAAAGGATACCAAATCAATCCGCGGTTTTTT
rJMSF032C20+ AATTTCCGACGAGGTTGGAGATGACAAGCAAAAGGATACCAAATCAATCCGCGGTTTTTT
                      ____________________________________________________________
consensus AATTTCCGACGAGGTTGGAGATGACAAGCAAAAGGATACCAAATCAATCCGCGGTTTTTT
 
. : . : . : . : . : . :
rJMSF015N24+ ACCCTCTGTAAACGGCCATCAATGAGATTTTAACTTAAGAAATGGAAATAAATCCCCCTA
rJMSF009O23+ ACCCTCTGTAAACGGCCATCAATGAGATTTTAACTTAAGAAATGGAAATAAATCCCCCTA
rJMSF032C20+ ACCCTCTGTAAACGGCCATCAATGAGATTTTAACTTAAGAAATGGAAATAAATCCCCCTA
                      ____________________________________________________________
consensus ACCCTCTGTAAACGGCCATCAATGAGATTTTAACTTAAGAAATGGAAATAAATCCCCCTA
 
. : . : . : . : . : . :
rJMSF015N24+ AGTCATCTGGTGTAAGTCAGCTTTGTACAGGCACTATAAATTTATTCAACT
rJMSF009O23+ AGTCATCTGGTGTAAGTCAGCTTTGTACAGGCACTATAAATTTATTCAACT
rJMSF032C20+ AGTCATCTGGTGTAAGTCAGCTTTGTACAGGCACTATAAATTTATTCAACTTACTCCTTA
                      ____________________________________________________________
consensus AGTCATCTGGTGTAAGTCAGCTTTGTACAGGCACTATAAATTTATTCAACTTACTCCTTA