Contig 008562:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008O08Sequence251003566 (4)ref|XP_009763010.1|8e-10PREDICTED: eukaryotic translation initiation factor 2A-like isoform X1 [Nicotia779008562 (4)ref|XP_011091567.1|1e-42PREDICTED: eukaryotic translation initiation factor 2A [Sesamum indicum]
JMSF030C19Sequence648003566 (4)ref|XP_009758482.1|7e-98PREDICTED: eukaryotic translation initiation factor 2A-like, partial [Nicotiana705008562 (4)ref|XP_011091567.1|9e-23PREDICTED: eukaryotic translation initiation factor 2A [Sesamum indicum]
JMSF042O02Sequence749003566 (4)ref|XP_009763010.1|5e-76PREDICTED: eukaryotic translation initiation factor 2A-like isoform X1 [Nicotia840008562 (4)emb|CDP10861.1|2e-44unnamed protein product [Coffea canephora]
JMSF047M14Sequence680003566 (4)ref|XP_009758482.1|7e-69PREDICTED: eukaryotic translation initiation factor 2A-like, partial [Nicotiana770008562 (4)ref|XP_011091567.1|9e-45PREDICTED: eukaryotic translation initiation factor 2A [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042O02+ CTTNGGAAACTTACCCGGTGATAT
                      ____________________________________________________________
consensus CTTNGGAAACTTACCCGGTGATAT
 
. : . : . : . : . : . :
rJMSF047M14+ AAGCTGAATTATCAGT
rJMSF042O02+ GGCATTNTGGGACTATGGTNGAAAAAAGGAACTTGCAACTACTAAAGCTGAATTATCAGT
rJMSF008O08+ ATCAGT
                      ____________________________________________________________
consensus GGCATTNTGGGACTATGGTNGAAAAAAGGAACTTGCAACTACTAAAGCTGAATTATCAGT
 
. : . : . : . : . : . :
rJMSF047M14+ GACAAGTGAATGGTCTCCGGATGGACGTTA-TTTTATGACTGCCACAACAGCTCCTAGAC
rJMSF042O02+ GACAAGTGAATGGTCTCCGGATGGACGTTATTTTTATGACTGCCACAACAGCTCCTAGAC
rJMSF008O08+ GACAAGTGAATGGTCTCCGGATGGACGTTA-TTTTATGACTGCCACAACAGCTCCTAGAC
                      ____________________________________________________________
consensus GACAAGTGAATGGTCTCCGGATGGACGTTA-TTTTATGACTGCCACAACAGCTCCTAGAC
 
. : . : . : . : . : . :
rJMSF047M14+ TCCAAGTTGACAATGGGATTAAGGTCTTTCATCACAATGGATCACTGTACTTCAAGAAGA
rJMSF042O02+ TCCAAGTTGACAATGGGATTAAGGTCTTTCATCACAATGGATCACTGTACTTCAAGAAGA
rJMSF008O08+ TCCAAGTTGACAATGGGATTAAGGTCTTTCATCACAATGGATCACTGTACTTCAAGAAGA
rJMSF030C19+ GGATTAAGGTCTTTCATCACAATGGATCACTGTACTTCAAGAAGA
                      ____________________________________________________________
consensus TCCAAGTTGACAATGGGATTAAGGTCTTTCATCACAATGGATCACTGTACTTCAAGAAGA
 
. : . : . : . : . : . :
rJMSF047M14+ TGTTTGAAAAATTGTACCAGGCTGACTGGAAACCTGAGTCCCCAGATAAGTTTGGTGAAA
rJMSF042O02+ TGTTTGAAAAATTGTACCAGGCTGACTGGAAACCTGAGTCCCCAGATAAGTTTGGTGAAA
rJMSF008O08+ TGTTTGAAAAATTGTACCAGGCTGACTGGAAACCTGAGTCCCCAGATAAGTTTGGTGAAA
rJMSF030C19+ TGTTTGAAAAATTGTACCAGGCTGACTGGAAACCTGAGTCCCCAGATAAGTTTGGTGAAA
                      ____________________________________________________________
consensus TGTTTGAAAAATTGTACCAGGCTGACTGGAAACCTGAGTCCCCAGATAAGTTTGGTGAAA
 
. : . : . : . : . : . :
rJMSF047M14+ TTTCAGAATTTTTGAAGGCTGTTGACTCCCTGAAAATTGACGAAACCAAAGTTCAAGGAC
rJMSF042O02+ TTTCAGAATTTTTGAAGGCTGTTGACTCCCTGAAAATTGACGAAACCAAAGTTCAAGGAC
rJMSF008O08+ TTTCAGAATTTTTGAAGGCTGTTGACTCCCTGAAAATTGACGAAACCAAAGTTCAAGGAC
rJMSF030C19+ TTTCAGAATTTTTGAAGGCTGTTGACTCCCTGAAAATTGACGAAACCAAAGTTCAAGGAC
                      ____________________________________________________________
consensus TTTCAGAATTTTTGAAGGCTGTTGACTCCCTGAAAATTGACGAAACCAAAGTTCAAGGAC
 
. : . : . : . : . : . :
rJMSF047M14+ AAGGATCAAAAGCTTCCAAACCTGCCACAAAAACTACACCTGCCAATCCTCCTGCACAAA
rJMSF042O02+ AAGGATCAAAAGCTTCCAAACCTGCCACAAAAACTACACCTGCCAATCCTCCTGCACAAA
rJMSF008O08+ AAGGATCAAAAGCTTCCAAACCTGCCACAAAAACTACACCTGCCAATCCTCCTGCACAAA
rJMSF030C19+ AAGGATCAAAAGCTTCCAAACCTGCCACAAAAACTACACCTGCCAATCCTCCTGCACAAA
                      ____________________________________________________________
consensus AAGGATCAAAAGCTTCCAAACCTGCCACAAAAACTACACCTGCCAATCCTCCTGCACAAA
 
. : . : . : . : . : . :
rJMSF047M14+ AGCCTGCTGCTTATCGTCCACCTCATGCCAAAGCTGCAGCTGCTGTCCAAGCAGAGTTAT
rJMSF042O02+ AGCCTGCTGCTTATCGTCCACCTCATGCCAAAGCTGCAGCTGCTGTCCAAGCAGAGTTAT
rJMSF008O08+ AGCCTGCTGCTTATCGTCCACCTCATGCCAAAGCTGCAGCTGCTGTCCAAGCAGAGTTAT
rJMSF030C19+ AGCCTGCTGCTTATCGTCCACCTCATGCCAAAGCTGCAGCTGCTGTCCAAGCAGAGTTAT
                      ____________________________________________________________
consensus AGCCTGCTGCTTATCGTCCACCTCATGCCAAAGCTGCAGCTGCTGTCCAAGCAGAGTTAT
 
. : . : . : . : . : . :
rJMSF047M14+ TTGGTGGAAATCCTTCAGGAGAGCTGAGCAAGAATGCACTGAAAAACAAGAAAAAGAGGG
rJMSF042O02+ TTGGTGGAAATCCTTCAGGAGAGCTGAGCAAGAATGCACTGAAAAACAAGAAAAAGAGGG
rJMSF008O08+ TTGGTGGAAATCCTTCAGGAGAGCTGAGCAAGAATGCACTGAAAAACAAGAAAAAGAGGG
rJMSF030C19+ TTGGTGGAAATCCTTCAGGAGAGCTGAGCAAGAATGCACTGAAAAACAAGAAAAAGAGGG
                      ____________________________________________________________
consensus TTGGTGGAAATCCTTCAGGAGAGCTGAGCAAGAATGCACTGAAAAACAAGAAAAAGAGGG
 
. : . : . : . : . : . :
rJMSF047M14+ AAAAACAAAAGGAGAAAAAAGCTGCTGAGGGTGCTATATAGTCAGTTCCAAGTCTACATC
rJMSF042O02+ AAAAACAAAAGGAGAAAAAAGCTGCTGAGGGTGCTATATAGTCAGTTCCAAGTCTACATC
rJMSF008O08+ AAAAACAAAAGGAGAAAAAAGCTGCTGAGGGTGCTATATAGTCAGTTCCAAGTCTACATC
rJMSF030C19+ AAAAACAAAAGGAGAAAAAAGCTGCTGAGGGTGCTATATAGTCAGTTCCAAGTCTACATC
                      ____________________________________________________________
consensus AAAAACAAAAGGAGAAAAAAGCTGCTGAGGGTGCTATATAGTCAGTTCCAAGTCTACATC
 
. : . : . : . : . : . :
rJMSF047M14+ ATCTCAAGTCTCAAGTCTTGGTCTGCTCAGGCTTAGGGCATTAGGTATTTGAGCCTTCAA
rJMSF042O02+ ATCTCAAGTCTCAAGTCTTGGTCTGCTCAGGCTTAGGGCATTAGGTATTTGAGCCTTCAA
rJMSF008O08+ ATCTCAAGTCTCAAGTCTTGGTCTGCTCAGGCTTAGGGCATTAGGTATTTGAGCCTTCAA
rJMSF030C19+ ATCTCAAGTCTCAAGTCTTGGTCTGCTCAGGCTTAGGGCATTAGGTATTTGAGCCTTCAA
                      ____________________________________________________________
consensus ATCTCAAGTCTCAAGTCTTGGTCTGCTCAGGCTTAGGGCATTAGGTATTTGAGCCTTCAA
 
. : . : . : . : . : . :
rJMSF047M14+ GCTATTCAATCATTCTGCCTATCCAAATGGCTGAAAATGTCGCCCTTGCTCGCACAATCA
rJMSF042O02+ GCTATTCAATCATTCTGCCTATCCAAATGGCTGAAAATGTCGCCCTTGCTCGCACAATCA
rJMSF008O08+ GCTATTCAATCATTCTGCCTATCCAAATGGCTGAAAATGTCGCCCTTGCTCGCACAATCA
rJMSF030C19+ GCTATTCAATCATTCTGCCTATCCAAATGGCTGAAAATGTCGCCCTTGCTCGCACAATCA
                      ____________________________________________________________
consensus GCTATTCAATCATTCTGCCTATCCAAATGGCTGAAAATGTCGCCCTTGCTCGCACAATCA
 
. : . : . : . : . : . :
rJMSF047M14+ TCATCCACGTTGGACGCTATGCCTTCTGAAAGCTTTTAAGTTTCAAAAATTTTGTACTAA
rJMSF042O02+ TCATCCACGTTGGACGCTATGCCTTCTGAAAGCTTTTAAGTTTCAAAAATTTTGTACTAA
rJMSF008O08+ TCATCCACGTTGGACGCTATGCCTTCTGAAAGCTTTTAAGTTTCAAAAATTTTGTACTAA
rJMSF030C19+ TCATCCACGTTGGACGCTATGCCTTCTGAAAGCTTTTAAGTTTCAAAAATTTTGTACTAA
                      ____________________________________________________________
consensus TCATCCACGTTGGACGCTATGCCTTCTGAAAGCTTTTAAGTTTCAAAAATTTTGTACTAA
 
. : . : . : . : . : . :
rJMSF047M14+ TGCAAAACTTTGGTCAACAATTATTTTCCATGTTCTGAAAGCTTTTAAGTTTCAAAAATT
rJMSF042O02+ TGCAAAACTTTGGTCAACAATTATTTTCCATGTTCTGAAAGCTTTTAAGTTTCAAAAATT
rJMSF008O08+ TGCAAAACTTTGGTCAACAATTATTTTCCATGTTCTGAAAGCTTTTAAGTTTCAAAAATT
rJMSF030C19+ TGCAAAACTTTGGTCAACAATTATTTTCCATGTTCTGAAAGCTTTTAAGTTTCAAAAATT
                      ____________________________________________________________
consensus TGCAAAACTTTGGTCAACAATTATTTTCCATGTTCTGAAAGCTTTTAAGTTTCAAAAATT
 
. : . : . : . : . : . :
rJMSF047M14+ TTGTACTATTGCAAAACTTTGGTCAAC
rJMSF042O02+ TTGTACTATTGCAAAACTTTGGTCAAC
rJMSF008O08+ TTGTACTATTGCAAAACTTTGGTCAACAATTATTTTCCATGTTCAGAGGCCTCT
rJMSF030C19+ TTGTACTATTGCAAAACTTTGGTCAACAATTATTTTCCATGTTCAGAGGCCTCTTGTGCT
                      ____________________________________________________________
consensus TTGTACTATTGCAAAACTTTGGTCAACAATTATTTTCCATGTTCAGAGGCCTCTTGTGCT