| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF005K11 | Sequence | 377 | 000742 (3) | 313 | 008527 (6) | ref|XP_007222908.1| | 1e-05 | hypothetical protein PRUPE_ppa003634mg [Prunus persica] gb|EMJ24107.1| hypotheti | |||
| JMSF020M01 | Sequence | 689 | 000742 (3) | ref|XP_009375689.1| | 107 | PREDICTED: uncharacterized protein LOC103964477 [Pyrus x bretschneideri] | 744 | 008527 (6) | ref|XP_009607738.1| | 6e-100 | PREDICTED: uncharacterized protein LOC104101894 isoform X1 [Nicotiana tomentosi |
| JMSF022N23 | Sequence | 681 | 008527 (6) | ref|XP_009607739.1| | 5e-133 | PREDICTED: uncharacterized protein LOC104101894 isoform X2 [Nicotiana tomentosi | 781 | 008527 (6) | ref|XP_009607739.1| | 4e-101 | PREDICTED: uncharacterized protein LOC104101894 isoform X2 [Nicotiana tomentosi |
| JMSF023G23 | Sequence | 651 | 000742 (3) | ref|XP_009375689.1| | 106 | PREDICTED: uncharacterized protein LOC103964477 [Pyrus x bretschneideri] | 713 | 008527 (6) | ref|XP_009607739.1| | 5e-84 | PREDICTED: uncharacterized protein LOC104101894 isoform X2 [Nicotiana tomentosi |
| JMSF046N22 | Sequence | 727 | 021182 | ref|XP_009375689.1| | 107 | PREDICTED: uncharacterized protein LOC103964477 [Pyrus x bretschneideri] | 738 | 008527 (6) | ref|XP_009607739.1| | 1e-105 | PREDICTED: uncharacterized protein LOC104101894 isoform X2 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMSF022N23- AAACTTGAATCAGTAAAACT
____________________________________________________________
consensus AAACTTGAATCAGTAAAACT
. : . : . : . : . : . :
JMSF022N23- TAAGGGTCTCACCCACCAGCAGAAGCTCGCTTTTTGGATTAACATCTATAATTCATGCAT
rJMSF046N22+ AGCAGAAGCTCGCTTTTTGGATTAACATCTATAATTCATGCAT
____________________________________________________________
consensus TAAGGGTCTCACCCACCAGCAGAAGCTCGCTTTTTGGATTAACATCTATAATTCATGCAT
. : . : . : . : . : . :
JMSF022N23- GATGAATGCGTTTTTAGAAAATGGAATTCCAGAGAGTCCCGAAATGGTGGTGGCCTTAAT
rJMSF046N22+ GATGAATGCGTTTTAGAAAAATGGAATTCCA--GAGTCCCGAAATGGTGGTGGCCTTAAT
rJMSF020M01+ AT
rJMSF022N23+ AT
____________________________________________________________
consensus GATGAATGCGTTTTTGGAAAATGGAATTCCAGAGAGTCCCGAAATGGTGGTGGCCTTAAT
. : . : . : . : . : . :
JMSF022N23- GCAAAAGGCGACGATTAATGTTGGGGGGCACTTGCTTAATGCCATAACCATTGAACATTT
rJMSF046N22+ GCAAAAGGCGACGATTAATGTTGGGGGGCACTTGCTTAATGCCATAACCATTGAACATTT
rJMSF020M01+ GCAAAAGGCGACGATTAATGTTGGGGGGCACTTGCTTAATGCCATAACCATTGAACATTT
rJMSF022N23+ GCAAAAGGCGACGATTAATGTTGGGGGGCACTTGCTTAATGCCATAACCATTGAACATTT
____________________________________________________________
consensus GCAAAAGGCGACGATTAATGTTGGGGGGCACTTGCTTAATGCCATAACCATTGAACATTT
. : . : . : . : . : . :
JMSF022N23- CATTCTGAGGCTGCCTTATCACTCGAAATTTACCTTCGAAAAGGGTATAAAAAACGATGA
rJMSF046N22+ CATTCTGAGGCTGCCTTATCACTCGAAATTTACCTTCGAAAAGGGTATAAAAAACGATGA
rJMSF020M01+ CATTCTGAGGCTGCCTTATCACTCGAAATTTACCTTCGAAAAGGGTATAAAAAACGATGA
rJMSF022N23+ CATTCTGAGGCTGCCTTATCACTCGAAATTTACCTTCGAAAAGGGTATAAAAAACGATGA
rJMSF023G23+ TGAGGCTGCCTTATCACTCGAAATTTACCTTCGAAAAGGGTATAAAAAACGATGA
____________________________________________________________
consensus CATTCTGAGGCTGCCTTATCACTCGAAATTTACCTTCGAAAAGGGTATAAAAAACGATGA
. : . : . : . : . : . :
JMSF022N23- GATGACAGCACGGAGTATCTTCGGGCTCGAGTTCTCTGAACCGCTAGTGACCTTTGCCCT
rJMSF046N22+ GATGACAGCACGGAGTATCTTCAGGCTCGAGTTCTCTGAACCGCTAGTGACCTTTGCCCT
rJMSF020M01+ GATGACAGCACGGAGTATCTTCGGGCTCGAGTTCTCTGAACCGCTAGTGACCTTTGCCCT
rJMSF022N23+ GATGACAGCACGGAGTATCTTCGGGCTCGAGTTCTCTGAACCGCTAGTGACCTTTGCCCT
rJMSF023G23+ GATGACAGCACGGAGTATCTTCGGGCTCGAGTTCTCTGAACCGCTAGTGACCTTTGCCCT
____________________________________________________________
consensus GATGACAGCACGGAGTATCTTCGGGCTCGAGTTCTCTGAACCGCTAGTGACCTTTGCCCT
. : . : . : . : . : . :
JMSF022N23- CTCGTGTGGAAGTTGGTCATCTCCTGCTGTGAGAGTATATACTGCATCGAAGATTGAAAC
rJMSF046N22+ CTCGTGTGGAAGTTGGTCATCTCCTGCTGTGAGAGTATATACTGCATCGAAGATTGAAAC
rJMSF020M01+ CTCGTGTGGAAGTTGGTCATCTCCTGCTGTGAGAGTATATACTGCATCGAAGATTGAAAC
rJMSF022N23+ CTCGTGTGGAAGTTGGTCATCTCCTGCTGTGAGAGTATATACTGCATCGAAGATTGAAAC
rJMSF023G23+ CTCGTGTGGAAGTTGGTCATCTCCTGCTGTGAGAGTATATACTGCATCGAAGATTGAAAC
____________________________________________________________
consensus CTCGTGTGGAAGTTGGTCATCTCCTGCTGTGAGAGTATATACTGCATCGAAGATTGAAAC
. : . : . : . : . : . :
JMSF022N23- CGAGCTAGAAGTAGCAAAACGAGAGTACTTGCAGGCAGCCATTGGGATTTCGAGTGCCAA
rJMSF046N22+ CGAGCTAGAAGTAGCAAAACGAGAGTACTTGCAGGCAGCCATTGGGATTTCGAGTGCCAA
rJMSF020M01+ CGAGCTAGAAGTAGCAAAACGAGAGTACTTGCAGGCAGCCATTGGGATTTCGAGTGCCAA
rJMSF022N23+ CGAGCTAGAAGTAGCAAAACGAGAGTACTTGCAGGCAGCCATTGGGATTTCGAGTGCCAA
rJMSF023G23+ CGAGCTAGAAGTAGCAAAACGAGAGTACTTGCAGGCAGCCATTGGGATTTCGAGTGCCAA
____________________________________________________________
consensus CGAGCTAGAAGTAGCAAAACGAGAGTACTTGCAGGCAGCCATTGGGATTTCGAGTGCCAA
. : . : . : . : . : . :
JMSF022N23- GAAAACGGTAGCAATACCAAAGCTGTTGGATTGGTATCTGCTAGATTTCGCGAAGGATTT
rJMSF046N22+ GAAAACGGTAGCAATACCAAAGCTGTTGGATTGGTATCTGCTAGATTTCGCGAAGGATTT
rJMSF020M01+ GAAAACGGTAGCAATACCAAAGCTGTTGCATTGGTATCTGCTAGATTTCGCGAAGGATTT
rJMSF022N23+ GAAAACGGTAGCAATACCAAAGCTGTTGGATTGGTATCTGCTAGATTTCGCGAAGGATTT
rJMSF023G23+ GAAAACGGTAGCAATACCAAAGCTGTTGGATTGGTATCTGCTAGATTTCGCGAAGGATTT
____________________________________________________________
consensus GAAAACGGTAGCAATACCAAAGCTGTTGGATTGGTATCTGCTAGATTTCGCGAAGGATTT
. : . : . : . : . : . :
JMSF022N23- GGAGTCATTGCTCGATTGGATATGCCTTCAACTACCCAGCGAGCTGGGAAAAGAAGCCCT
rJMSF046N22+ GGAGTCATTGCTCGATTGGATATGCCTTCAACTACCCAGCGAGCTGGGAAAAGAAGCCCT
rJMSF020M01+ GGAGTCATTGCTCGATTGGATATGCCTTCAACTACCCAGCGAGCTGGGAAAAGAAGCCCT
rJMSF022N23+ GGAGTCATTGCTCGATTGGATATGCCTTCAACTACCCAGCGAGCTGGGAAAAGAAGCCCT
rJMSF023G23+ GGAGTCATTGCTCGATTGGATATGCCTTCAACTACCCAGCGAGCTGGGAAAAGAAGCCCT
____________________________________________________________
consensus GGAGTCATTGCTCGATTGGATATGCCTTCAACTACCCAGCGAGCTGGGAAAAGAAGCCCT
. : . : . : . : . : . :
JMSF022N23- CAGCTGCCTCGAGAGAGGAAACAACGAGCCACTTTCCCAGGTTCTCGAAATCATACCATA
rJMSF046N22+ CAGCTGCCTCGAGAGAGGAAACAACGAGCCACTTTCCCAGGTTCTCGAAATCATACCATA
rJMSF020M01+ CAGCTGCCTCGAGAGAGGAAACAACGAGCCACTTTCCCAGGTTCTCGAAATCATACCATA
rJMSF005K11+ TCGAGAGAGGAAACAACGAGCCACTTTCCCAGGTTCTCGAAATCATACCATA
rJMSF022N23+ CAGCTGCCTCGAGAGAGGAAACAACGAGCCACTTTCCCAGGTTCTCGAAATCATACCATA
rJMSF023G23+ CAGCTGCCTCGAGAGAGGAAACAACGAGCCACTTTCCCAGGTTCTCGAAATCATACCATA
____________________________________________________________
consensus CAGCTGCCTCGAGAGAGGAAACAACGAGCCACTTTCCCAGGTTCTCGAAATCATACCATA
. : . : . : . : . : . :
JMSF022N23- TGAATTCAGTTTCAGGTACCTGCTATGCATGTAAATTTCGGGTTTTTCTTTAGTCTTTTT
rJMSF046N22+ TGAATTCAGTTTCAGGTACCTGCTATGCATGTAAATTTCGGGTTTTTCTTTAGTCTTTTT
rJMSF020M01+ TGAATTCAGTTTCAGGTACCTGCTATGCATGTAAATTTCGGGTTTTTCTTTAGTCTTTTT
rJMSF005K11+ TGAATTCAGTTTCAGGTACCTGCTATGCACGTAAANTTCGGGTNGTTCTTTAGTCTTTTT
rJMSF022N23+ TGAATTCAGTTTCAGGTACCTGCTATGCATGTAAATTTCGGGTTTTTCTTTAGTCTTTTT
rJMSF023G23+ TGAATTCAGTTTCAGGTACCTGCTATGCATGTAAATTTCGGGTTTTTCTTTAGTCTTTTT
____________________________________________________________
consensus TGAATTCAGTTTCAGGTACCTGCTATGCATGTAAATTTCGGGTTTTTCTTTAGTCTTTTT
. : . : . : . : . : . :
JMSF022N23- C
rJMSF046N22+ CACCACACAGTTCAATGGTTTTCGAGTCACAGGTCGAAATAGAGCTAGCACTATAGATAC
rJMSF020M01+ CACCACACAGTTCAATGGTTTTCGAGTCACAGGTCGAAATAGAGCTAGCACTATAGATAC
rJMSF005K11+ CACCACACAGTTCAATGGTNTTCGAGTCACAGGTCGAAATAGAGCTAGCACTATAGATAC
rJMSF022N23+ CACCACACAGTTCAATGGTTTTCGAGTCACAGGTCGAAATAGAGCTAGCACTATAGATAC
rJMSF023G23+ CACCACACAGTTCAATGGTTTTCGAGTCACAGGTCGAAATAGAGCTAGCACTATAGATAC
____________________________________________________________
consensus CACCACACAGTTCAATGGTTTTCGAGTCACAGGTCGAAATAGAGCTAGCACTATAGATAC
. : . : . : . : . : . :
rJMSF046N22+ ATATAGAGATTGAAGTGTATATTCTCCTT-CTGAGTAA
rJMSF020M01+ ATATAGAGATTGAAGTGTATATTCTCCTT-CTGAGTAAATTTTTGCTCTCTTCCACAATC
rJMSF005K11+ ATATAGAGATTGAAGTGTATATTCTCCTTNGTGAGTAAATTTCTGCTCTCTTCCACAATC
rJMSF022N23+ ATATAGAGATTGAAGTGTATATTCTCCTT-CTGAGTAAATTTTTGCTCTCTTCCACAATC
rJMSF023G23+ ATATAGAGATTGAAGTGTATATTCTCCTT-CTGAGTAAATTTTTGCTCTCTTCCACAATC
____________________________________________________________
consensus ATATAGAGATTGAAGTGTATATTCTCCTT-CTGAGTAAATTTTTGCTCTCTTCCACAATC
. : . : . : . : . : . :
rJMSF020M01+ AAATCAGCAGCTTGGCATATTTTATGTAACAATCATATCTGTCATGATTGGCATATATTA
rJMSF005K11+ AAATCAGCAGCTTGGCATATTNTATGTAACAATCATATCTGNCATGACTGGCATATATTA
rJMSF022N23+ AAATCAGCAGCTTGGCATATTTTATGTAACAATCATATCTGTCATGATTGGCATATATTA
rJMSF023G23+ AAATCAGCAGCTTGGCATATTTTATGTAACAATCATATCTGTCATGATTGGCATATATTA
____________________________________________________________
consensus AAATCAGCAGCTTGGCATATTTTATGTAACAATCATATCTGTCATGATTGGCATATATTA
. : . : . : . : . : . :
rJMSF020M01+ GTAATAGGGGTT
rJMSF005K11+ GTANTAGGGGTT
rJMSF022N23+ GTAATAGGGGTTTGAAAGATTGGTTCTTGGTTTTTCCTGCCATGAT
rJMSF023G23+ GTAATAGGGGTTTGAAAGATTGG-TCTTGGTTTTTCCTGCCATGATTAATAAAATGCTTG
____________________________________________________________
consensus GTAATAGGGGTTTGAAAGATTGGTTCTTGGTTTTTCCTGCCATGATTAATAAAATGCTTG