Contig 008526:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023F21Sequence647013366 (3)ref|XP_006349736.1|4e-67PREDICTED: guanylate-binding protein 4-like [Solanum tuberosum]787008526 (2)emb|CDP03685.1|5e-103unnamed protein product [Coffea canephora]
JMSF035F19Sequence702013366 (3)ref|XP_007050442.1|8e-104Guanylate-binding family protein isoform 3 [Theobroma cacao] gb|EOX94599.1| Guan706008526 (2)emb|CDP03685.1|2e-83unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023F21+ TCCATCAAT
                      ____________________________________________________________
consensus TCCATCAAT
 
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rJMSF023F21+ GGCAAAATTCAATGCGGGATTCCTTCAGTGCAACCAAAGTTTCGAAAAAGAATGCGNTGG
                      ____________________________________________________________
consensus GGCAAAATTCAATGCGGGATTCCTTCAGTGCAACCAAAGTTTCGAAAAAGAATGCGNTGG
 
. : . : . : . : . : . :
rJMSF035F19+ AAACTACGAACAACGGATGACAAAGATGATGGAGAAGTCGAGGTCTCT
rJMSF023F21+ ACCTTCTAAAAGAAACTACGAACAACGGATGACAAAGATGATGGAGAAGTCGAGGTCTCT
                      ____________________________________________________________
consensus ACCTTCTAAAAGAAACTACGAACAACGGATGACAAAGATGATGGAGAAGTCGAGGTCTCT
 
. : . : . : . : . : . :
rJMSF035F19+ GTTTATTAAGGAATATAATCACAGATTGTTTAATTGGTTGGTGGCATTCTCTCTCGTCAT
rJMSF023F21+ GTTTATTAAGGAATATAATCACAGATTGTTTAATTGGTTGGTGGCATTCTCTCTCGTCAT
                      ____________________________________________________________
consensus GTTTATTAAGGAATATAATCACAGATTGTTTAATTGGTTGGTGGCATTCTCTCTCGTCAT
 
. : . : . : . : . : . :
rJMSF035F19+ GGTGGTGGTTGGTCGATTTGTGATAAAGTTCATTTTGGTTGAAATTGGAGCGTGGGTACT
rJMSF023F21+ GGTGGTGGTTGGTCGATTTGTGATAAAGTTCATTTTGGTTGAAATTGGAGCGTGGGTACT
                      ____________________________________________________________
consensus GGTGGTGGTTGGTCGATTTGTGATAAAGTTCATTTTGGTTGAAATTGGAGCGTGGGTACT
 
. : . : . : . : . : . :
rJMSF035F19+ TTTTATTTTCTTAGAGACGTACACAAGAATGTTTTGGTCAGCGGAGTCGCTGTATTACAA
rJMSF023F21+ TTTTATTTTCTTAGAGACGTACACAAGAATGTTTTGGTCAGCGGAGTCGCTGTATTACAA
                      ____________________________________________________________
consensus TTTTATTTTCTTAGAGACGTACACAAGAATGTTTTGGTCAGCGGAGTCGCTGTATTACAA
 
. : . : . : . : . : . :
rJMSF035F19+ CCCCGTATGGCATGTAATCGTGACTACATGGGAAACTGTCGTCTATAGTCCAATCCTTGA
rJMSF023F21+ CCCCGTATGGCATGTAATCGTGACTACATGGGAAACTGTCGTCTATAGTCCAATCCTTGA
                      ____________________________________________________________
consensus CCCCGTATGGCATGTAATCGTGACTACATGGGAAACTGTCGTCTATAGTCCAATCCTTGA
 
. : . : . : . : . : . :
rJMSF035F19+ TTTAGACAGATGGGCAATTCCCATTTGCGTGATGGCGGCACTATTTGTGGTATATTGGCG
rJMSF023F21+ TTTAGACAGATGGGCAATTCCCATTTGCGTGATGGCGGCACTATTTGTGGTATATTGGCG
                      ____________________________________________________________
consensus TTTAGACAGATGGGCAATTCCCATTTGCGTGATGGCGGCACTATTTGTGGTATATTGGCG
 
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rJMSF035F19+ ATGCTACGGGAGGAGGAAAAATGGGGCTCGGTGGCTGTTACCCGTGTACAGCAACCCGAA
rJMSF023F21+ ATGCTACGGGAGGAGGAAAAATGGGGCTCGGTGGCTGTTACCCGTGTACAGCAACCCGAA
                      ____________________________________________________________
consensus ATGCTACGGGAGGAGGAAAAATGGGGCTCGGTGGCTGTTACCCGTGTACAGCAACCCGAA
 
. : . : . : . : . : . :
rJMSF035F19+ AGATAGGCGGAGATCAGAATAAGACGATCAACGCAACCCAACCCTACCCTAGCGAGCTTT
rJMSF023F21+ AGATAGGCGGAGATCAGAATAAGACGATCAACGCAACCCAACCCTACCCTAGCGAGCTTT
                      ____________________________________________________________
consensus AGATAGGCGGAGATCAGAATAAGACGATCAACGCAACCCAACCCTACCCTAGCGAGCTTT
 
. : . : . : . : . : . :
rJMSF035F19+ GTATTTTATTGTGAAAGCGCGCAGGCAGGTCATATACCCTACCCTACCCCCCCTTCTTCT
rJMSF023F21+ GTATTTTATTGTGAAAGCGCGCAGGCAGGTCATATACCCTACCCTACCCCCCCTTCTTCT
                      ____________________________________________________________
consensus GTATTTTATTGTGAAAGCGCGCAGGCAGGTCATATACCCTACCCTACCCCCCCTTCTTCT
 
. : . : . : . : . : . :
rJMSF035F19+ TGATGATGATTCAAGAAACTCAACAAGATAGATGAATTGCTTTGCTTTGTTGTAACAAGT
rJMSF023F21+ TGATGATGATTCAAGAAACTCAACAAGATAGATGAATTGCTT--CTTTGTTGTAACAAGT
                      ____________________________________________________________
consensus TGATGATGATTCAAGAAACTCAACAAGATAGATGAATTGCTTTGCTTTGTTGTAACAAGT
 
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rJMSF035F19+ GGAAATCATCTTATTTCTATAAATTTCTCCTCGCTTTTACTCGGTCTAATAGGTGGTGAA
rJMSF023F21+ GGAAATCATCTTATTTCTATAAATTTCTCCTCGCTTTTACTCGGTCTAATAGGTGGTGAA
                      ____________________________________________________________
consensus GGAAATCATCTTATTTCTATAAATTTCTCCTCGCTTTTACTCGGTCTAATAGGTGGTGAA
 
. : . : . : . : . : . :
rJMSF035F19+ ATCACATTTGATTGATTAATTCCTCCTTTAATTTGTGTATTTGTATTGTATGATAGGG
rJMSF023F21+ ATCACATTTGATTGATTAATTCCTCCTTTAATTTGTGTATTTGTATTGTATGATAGGGGA
                      ____________________________________________________________
consensus ATCACATTTGATTGATTAATTCCTCCTTTAATTTGTGTATTTGTATTGTATGATAGGGGA