clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF020J20 | Sequence | 499 | 008515 (10) | ref|XP_010252234.1| | 3e-07 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 694 | 008515 (10) | ref|XP_010252234.1| | 1e-06 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] |
JMFF026L10 | Sequence | 499 | 008515 (10) | ref|XP_010252234.1| | 2e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 608 | 008515 (10) | ref|XP_010252235.1| | 3e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X2 [Nelumbo nucifera] |
JMFN004A12 | Sequence | 609 | 008515 (10) | ref|XP_010252234.1| | 3e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | |||||
JMFN019A13 | Sequence | 478 | 008515 (10) | ref|XP_010252235.1| | 4e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X2 [Nelumbo nucifera] | |||||
JMSF021K11 | Sequence | 628 | 008515 (10) | ref|XP_010252234.1| | 4e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 587 | 008515 (10) | ref|XP_010252234.1| | 3e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] |
JMSF038E06 | Sequence | 672 | 008515 (10) | ref|XP_010252234.1| | 5e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 708 | 008515 (10) | ref|XP_010252234.1| | 6e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF020J20- AACTTTTTTT
____________________________________________________________
consensus AACTTTTTTT
. : . : . : . : . : . :
rJMFF020J20- AGAAGCTAACAGCAGAAACGGGAAACAGATACAAAATGACGTCGTTTTGGGTCAGGACGC
rJMSF038E06- GCAGAAACGGGAAACAGATACAAAATGACGTCGTTTTGGGTCAGGACGC
JMSF038E06+ TGGGTCAGGACGC
____________________________________________________________
consensus AGAAGCTAACAGCAGAAACGGGAAACAGATACAAAATGACGTCGTTTTGGGTCAGGACGC
. : . : . : . : . : . :
rJMFF020J20- ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
JMFN004A12+ AAATAAACTAGCATATATGACAT
rJMSF038E06- ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
JMSF038E06+ ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
rJMFF026L10- ATATGACAT
JMSF021K11+ ACACACAAATAAACTAGCATATATGACAT
____________________________________________________________
consensus ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
. : . : . : . : . : . :
rJMFF020J20- AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
JMFN004A12+ AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
rJMSF038E06- AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
JMSF038E06+ AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
rJMFF026L10- AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
JMSF021K11+ AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
rJMSF021K11- ATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
____________________________________________________________
consensus AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
. : . : . : . : . : . :
rJMFF020J20- TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMFN019A13+ ACAACTAGGCTGAGAGCTCATCTTATTA
JMFN004A12+ TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
rJMSF038E06- TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMFF020J20+ AGGCTGAGAGCTCATCTTATTA
JMSF038E06+ TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
rJMFF026L10- TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMSF021K11+ TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMFF026L10+ TGAGAGCTCATCTTATTA
rJMSF021K11- TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
____________________________________________________________
consensus TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
. : . : . : . : . : . :
rJMFF020J20- TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFN019A13+ TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFN004A12+ TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
rJMSF038E06- TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFF020J20+ TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMSF038E06+ TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
rJMFF026L10- TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMSF021K11+ TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFF026L10+ TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
rJMSF021K11- TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
____________________________________________________________
consensus TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
. : . : . : . : . : . :
rJMFF020J20- CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFN019A13+ CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFN004A12+ CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
rJMSF038E06- CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFF020J20+ CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMSF038E06+ CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
rJMFF026L10- CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMSF021K11+ CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFF026L10+ CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
rJMSF021K11- CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
____________________________________________________________
consensus CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
. : . : . : . : . : . :
rJMFF020J20- TGACAGCGTCGTTTTCTCCGACGACACGGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFN019A13+ TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFN004A12+ TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
rJMSF038E06- TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFF020J20+ TGACAGCGTCGTTTTCTCCGACGACACGGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMSF038E06+ TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
rJMFF026L10- TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMSF021K11+ TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFF026L10+ TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
rJMSF021K11- TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
____________________________________________________________
consensus TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
. : . : . : . : . : . :
rJMFF020J20- TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFN019A13+ TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFN004A12+ TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
rJMSF038E06- TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFF020J20+ TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMSF038E06+ TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
rJMFF026L10- TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMSF021K11+ TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFF026L10+ TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
rJMSF021K11- TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
____________________________________________________________
consensus TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
. : . : . : . : . : . :
rJMFF020J20- AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFN019A13+ AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFN004A12+ AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
rJMSF038E06- AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFF020J20+ AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMSF038E06+ AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
rJMFF026L10- AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMSF021K11+ AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFF026L10+ AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
rJMSF021K11- AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
____________________________________________________________
consensus AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
. : . : . : . : . : . :
rJMFF020J20- TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFN019A13+ TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFN004A12+ TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
rJMSF038E06- TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFF020J20+ TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMSF038E06+ TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
rJMFF026L10- TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMSF021K11+ TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFF026L10+ TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
rJMSF021K11- TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
____________________________________________________________
consensus TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
. : . : . : . : . : . :
rJMFF020J20- TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFN019A13+ TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFN004A12+ TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
rJMSF038E06- TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFF020J20+ TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMSF038E06+ TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
rJMFF026L10- TGCCGGACTTGGATGGGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMSF021K11+ TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFF026L10+ TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
rJMSF021K11- TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
____________________________________________________________
consensus TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
. : . : . : . : . : . :
rJMFF020J20- TTGCAAAACGCCGCCTTGTCACCGC
JMFN019A13+ TTGCAAAACGCCGCCTTGTCACCGCCGTCCA
JMFN004A12+ TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTA
rJMSF038E06- TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGAT
JMFF020J20+ TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGAT
JMSF038E06+ TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGAT
rJMFF026L10- TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATC
JMSF021K11+ TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATC
JMFF026L10+ TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATC
rJMSF021K11- TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATCC
____________________________________________________________
consensus TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATCC