Contig 008513:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011B22Sequence351013348 (2)738008513 (2)ref|XP_009759488.1|1e-96PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri
JMSF021I03Sequence690013348 (2)ref|XP_011093490.1|1e-25PREDICTED: probable receptor-like protein kinase At5g47070 [Sesamum indicum] re749008513 (2)ref|XP_009759488.1|7e-100PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF011B22+ TACAGCGGTTGTAGGAAC
rJMSF021I03+ ACTCATGTTTNTACAGCGGTTGTAGGAAC
                      ____________________________________________________________
consensus ACTCATGTTTNTACAGCGGTTGTAGGAAC
 
. : . : . : . : . : . :
rJMSF011B22+ ACATGGTTATGCAGCCCCCGATTACATCGAAACTGGTCACCTTACAACTAAGAGTGATGT
rJMSF021I03+ ACATGGTTATGCAGCCCCCGATTACATCGAAACTGGTCACCTTACAGCTAAGAGTGATGT
                      ____________________________________________________________
consensus ACATGGTTATGCAGCCCCCGATTACATCGAAACTGGTCACCTTACAGCTAAGAGTGATGT
 
. : . : . : . : . : . :
rJMSF011B22+ TTGGAGCTTCGGTGTCGTACTATACGAGATCCTATCGGGTAGAAGATCACTCGACAGAAA
rJMSF021I03+ TTGGAGCTTCGGTGTCGTACTATACGAGATCCTATCGGGTAGAAGATCACTCGACAGAAA
                      ____________________________________________________________
consensus TTGGAGCTTCGGTGTCGTACTATACGAGATCCTATCGGGTAGAAGATCACTCGACAGAAA
 
. : . : . : . : . : . :
rJMSF011B22+ CAGGCCTAGATCAGAACAAAAACTCTTGGAATGGGTTAAGCACTATCCTGCTGACAGTCG
rJMSF021I03+ CAGGCCTAGATCAGAACAAAAACTCTTGGAATGGGTTAAGCACTATCCTGCTGACAGTCG
                      ____________________________________________________________
consensus CAGGCCTAGATCAGAACAAAAACTCTTGGAATGGGTTAAGCACTATCCTGCTGACAGTCG
 
. : . : . : . : . : . :
rJMSF011B22+ GAAATTCAGCACGATAATGGACCCGAGACTGGAAAATCAGTATTCACTAGGAGCAGCTCG
rJMSF021I03+ GAAATTCAGCACGATAATGGACCCGAGACTGGAAAATCAGTATTCACTAGGAGCAGCTCG
                      ____________________________________________________________
consensus GAAATTCAGCACGATAATGGACCCGAGACTGGAAAATCAGTATTCACTAGGAGCAGCTCG
 
. : . : . : . : . : . :
rJMSF011B22+ AAAGGTTGCAAAGTTAGCAGATGCGTGTTTGTCCAAGAATTCAAAGGAACGGCCCAAAAT
rJMSF021I03+ AAAGGTTGCAAAGTTAGCAGATGCGTGTTTGTCCAAGAATTCAAAGGAACGGCCCAAAAT
                      ____________________________________________________________
consensus AAAGGTTGCAAAGTTAGCAGATGCGTGTTTGTCCAAGAATTCAAAGGAACGGCCCAAAAT
 
. : . : . : . : . : . :
rJMSF011B22+ GAGCCAAGTCGTGGAATCCTTGAAACAGATCATTCAGAGCTGTGGCGGCGAGAGTAGCCC
rJMSF021I03+ GAGCCAAGTCGTGGAATCCTTGAAACAGATCATTCAGAGCTGTGGCGGCGAGAGTAGCCC
                      ____________________________________________________________
consensus GAGCCAAGTCGTGGAATCCTTGAAACAGATCATTCAGAGCTGTGGCGGCGAGAGTAGCCC
 
. : . : . : . : . : . :
rJMSF011B22+ CTCCTTGCACAAGAGTTTCGAGTGCGTGGAAGATGATCCAGTTGACGACGAGAAACCCAA
rJMSF021I03+ CTCCTTGCACAAGAGTTTCGAGTGCGTGGAAGATGATCCAGTTGACGACGAGAAACCCAA
                      ____________________________________________________________
consensus CTCCTTGCACAAGAGTTTCGAGTGCGTGGAAGATGATCCAGTTGACGACGAGAAACCCAA
 
. : . : . : . : . : . :
rJMSF011B22+ GCAGATGGGACCCGCGGAATCAGCGAAAAGGCGGATGGCACAGTTGGCCAAGCTAAGTGA
rJMSF021I03+ GCAGATGGGACCCGCGGAATCAGCGAAGAGGCGGATGGCACAGTTGGCCAAGCTAAGTGA
                      ____________________________________________________________
consensus GCAGATGGGACCCGCGGAATCAGCGAAGAGGCGGATGGCACAGTTGGCCAAGCTAAGTGA
 
. : . : . : . : . : . :
rJMSF011B22+ ACATGTTGGTGGAATCAGCAGAAGAAGGTTTATGATGATGCAGAGAGCCAAAGTTACATG
rJMSF021I03+ ACATGTTGGTGGAATCAGCAGAAGAAGGTTTATGATGATGCAGAGAGCCAAAGTTACATG
                      ____________________________________________________________
consensus ACATGTTGGTGGAATCAGCAGAAGAAGGTTTATGATGATGCAGAGAGCCAAAGTTACATG
 
. : . : . : . : . : . :
rJMSF011B22+ ATAAAAGGCAAGCATGCATTTTTTTTTAATGTGAAAGCTTCAAATATGAAGGAAATTTGA
rJMSF021I03+ ATAAAAGGCAAGCATGCATTTTTTTTTAATGTGAAAGCTTCAAATATGAAGGAAATTTGA
                      ____________________________________________________________
consensus ATAAAAGGCAAGCATGCATTTTTTTTTAATGTGAAAGCTTCAAATATGAAGGAAATTTGA
 
. : . : . : . : . : . :
rJMSF011B22+ TGTTTCTATCAATCTGAAACAACGTTAACAAGACCACGAAACACATGTTCAAAGTAGTGT
rJMSF021I03+ TGTTTCTATCAATCTGAAACAACGTTAACAAGACCACGAAACACATGTTCAAAGTAGTGT
                      ____________________________________________________________
consensus TGTTTCTATCAATCTGAAACAACGTTAACAAGACCACGAAACACATGTTCAAAGTAGTGT
 
. : . : . : . : . : . :
rJMSF011B22+ CACAGGTCTCAGGTTGTAGCCATATGTATGCCCATCTTGGCTGTTTGTTTATGT
rJMSF021I03+ CACAGGTCTCAGGTTGTAGCCATATGTATGCCCATCTTGGCTGTTTGTTTATGTTGGGCC
                      ____________________________________________________________
consensus CACAGGTCTCAGGTTGTAGCCATATGTATGCCCATCTTGGCTGTTTGTTTATGTTGGGCC