Contig 008507:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009G24Sequence248006053 (4)751008507 (2)ref|XP_004242585.1|8e-135PREDICTED: omega-6 fatty acid desaturase, chloroplastic [Solanum lycopersicum]
JMSF019P07Sequence490006053 (4)ref|XP_009801093.1|5e-30PREDICTED: omega-6 fatty acid desaturase, chloroplastic isoform X2 [Nicotiana s738008507 (2)ref|XP_004242585.1|2e-131PREDICTED: omega-6 fatty acid desaturase, chloroplastic [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009G24+ TTGCGTAAGGCATTGATAATTGCTATGGGAC
rJMSF019P07+ TGATAATTGCTATGGGAC
                      ____________________________________________________________
consensus TTGCGTAAGGCATTGATAATTGCTATGGGAC
 
. : . : . : . : . : . :
rJMSF009G24+ CCATTCGACCTTGGATGTCTATAGCTCACTGGTTGGTCTGCCATTTTAATTTGAACAAGT
rJMSF019P07+ CCATTCGACCTTGGATGTCTATAGCTCACTGGTTGGTCTGCCATTTTAATTTGAACAAGT
                      ____________________________________________________________
consensus CCATTCGACCTTGGATGTCTATAGCTCACTGGTTGGTCTGCCATTTTAATTTGAACAAGT
 
. : . : . : . : . : . :
rJMSF009G24+ TCAGACCTAGCGAAGTCAATAGAGTAAAAATAAGCTTAGCCTGCGTCTTTGCTTTCATGG
rJMSF019P07+ TCAGACCTAGCGAAGTCAATAGAGTAAAAATAAGCTTAGCCTGCGTCTTTGCTTTCATGG
                      ____________________________________________________________
consensus TCAGACCTAGCGAAGTCAATAGAGTAAAAATAAGCTTAGCCTGCGTCTTTGCTTTCATGG
 
. : . : . : . : . : . :
rJMSF009G24+ CTATTGGATGGCCGTTGATCATCTACAAAGCGGGAATAATTGGATGGGTCAAGTTTTGGC
rJMSF019P07+ CTATTGGATGGCCGTTGATCATCTACAAAGCGGGAATAATTGGATGGGTCAAGTTTTGGC
                      ____________________________________________________________
consensus CTATTGGATGGCCGTTGATCATCTACAAAGCGGGAATAATTGGATGGGTCAAGTTTTGGC
 
. : . : . : . : . : . :
rJMSF009G24+ TCATGCCATGGCTGGGTTATCACTTTTGGATGAGTACCTTTACAATGGTCCATCATACCG
rJMSF019P07+ TCATGCCATGGCTGGGTTATCACTTTTGGATGAGTACCTTTACAATGGTCCATCATACCG
                      ____________________________________________________________
consensus TCATGCCATGGCTGGGTTATCACTTTTGGATGAGTACCTTTACAATGGTCCATCATACCG
 
. : . : . : . : . : . :
rJMSF009G24+ CTCCTCACATTCCCTTCAAATATTCAAACGAGTGGAATGCAGCTCAAGCCCAGCTTAATG
rJMSF019P07+ CTCCTCACATTCCCTTCAAATATTCAAACGAGTGGAATGCAGCTCAAGCCCAGCTTAATG
                      ____________________________________________________________
consensus CTCCTCACATTCCCTTCAAATATTCAAACGAGTGGAATGCAGCTCAAGCCCAGCTTAATG
 
. : . : . : . : . : . :
rJMSF009G24+ GCACAGTTCATTGCGACTATCCTCGTTGGATTGAGATCCTTTGCCACGATATTAATGTTC
rJMSF019P07+ GCACAGTTCATTGCGACTATCCTCGTTGGATTGAGATCCTTTGCCACGATATTAATGTTC
                      ____________________________________________________________
consensus GCACAGTTCATTGCGACTATCCTCGTTGGATTGAGATCCTTTGCCACGATATTAATGTTC
 
. : . : . : . : . : . :
rJMSF009G24+ ACATACCCCACCATGTCTCCCCGAGAATACCAAGCTATAATCTGCGGGATGCTCATAAAT
rJMSF019P07+ ACATACCCCACCATGTCTCCCCGAGAATACCAAGCTATAATCTGCGGGATGCTCATAAAT
                      ____________________________________________________________
consensus ACATACCCCACCATGTCTCCCCGAGAATACCAAGCTATAATCTGCGGGATGCTCATAAAT
 
. : . : . : . : . : . :
rJMSF009G24+ CCATCCAAGAGAATTGGGGAAGGTACTTGAATGAGGCCACATGGAATTGGCGTCTAATGA
rJMSF019P07+ CCATCCAAGAGAATTGGGGAAGGTACTTGAATGAGGCCACATGGAATTGGCGTCTAATGA
                      ____________________________________________________________
consensus CCATCCAAGAGAATTGGGGAAGGTACTTGAATGAGGCCACATGGAATTGGCGTCTAATGA
 
. : . : . : . : . : . :
rJMSF009G24+ AGACGATAATGACAATGTGTCATGTCTATGATAAGGAGCGGAACTATATTCCATTTGACG
rJMSF019P07+ AGACGATAATGACAATGTGTCATGTCTATGATAAGGAGCGGAACTATATTCCATTTGACG
                      ____________________________________________________________
consensus AGACGATAATGACAATGTGTCATGTCTATGATAAGGAGCGGAACTATATTCCATTTGACG
 
. : . : . : . : . : . :
rJMSF009G24+ AACTTGCCCCTACCGAATCCCAACCAATCACTTTCCTTAAAAAAGTAATGCCCGAGTACG
rJMSF019P07+ AACTTGCCCCTACCGAATCCCAACCAATCACTTTCCTTAAAAAAGTAATGCCCGAGTACG
                      ____________________________________________________________
consensus AACTTGCCCCTACCGAATCCCAACCAATCACTTTCCTTAAAAAAGTAATGCCCGAGTACG
 
. : . : . : . : . : . :
rJMSF009G24+ CTTAGCAAATTGATTCTGTATTACTAATCGATTGTTCTTTAGAGCTTCCTCCATTTTTGT
rJMSF019P07+ CTTAGCAAATTGATTCTGTATTACTAATCGATTGTTCTTTAGAGCTTCCTCCATTTTTGT
                      ____________________________________________________________
consensus CTTAGCAAATTGATTCTGTATTACTAATCGATTGTTCTTTAGAGCTTCCTCCATTTTTGT
 
. : . : . : . : . : . :
rJMSF009G24+ TTGCAGTTAAGCTAGTTTTCTTAGTTCATTTCTATATAAACAGACTTTGTCCCAGACATT
rJMSF019P07+ TTGCAGTTAAGCTAGTTTTCTTAGTTCATTTCTATATAAACAGACTTTGTCCCAGACATT
                      ____________________________________________________________
consensus TTGCAGTTAAGCTAGTTTTCTTAGTTCATTTCTATATAAACAGACTTTGTCCCAGACATT